RNA–Protein interactions for RNA: ENST00000520889.1

IGHV4-55-201, Transcript of immunoglobulin heavy variable 4-55 (pseudogene), humanhuman

BASIC

Gene IGHV4-55, Length 368 nt, Biotype IG V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV4-55-201ENST00000520889 TMEM245Q9H330 911 aa6.5□□□□□ -1.37
IGHV4-55-201ENST00000520889 LMAN1LQ9HAT1 526 aa6.5□□□□□ -1.37
IGHV4-55-201ENST00000520889 FBRSL1Q9HCM7 1045 aaKnown RBP6.5□□□□□ -1.37
IGHV4-55-201ENST00000520889 ETNK2Q9NVF9 386 aa6.5□□□□□ -1.37
IGHV4-55-201ENST00000520889 IPO11Q9UI26 975 aaKnown RBP6.5□□□□□ -1.37
IGHV4-55-201ENST00000520889 VPS51Q9UID3 782 aa6.5□□□□□ -1.37
IGHV4-55-201ENST00000520889 MMP17Q9ULZ9 603 aa6.5□□□□□ -1.37
IGHV4-55-201ENST00000520889 PACSIN2Q9UNF0 486 aaPredicted RBP6.5□□□□□ -1.37
IGHV4-55-201ENST00000520889 DRG1Q9Y295 367 aaKnown RBP6.5□□□□□ -1.37
IGHV4-55-201ENST00000520889 SIT1Q9Y3P8 196 aa6.5□□□□□ -1.37
IGHV4-55-201ENST00000520889 SAR1BQ9Y6B6 198 aa6.5□□□□□ -1.37
IGHV4-55-201ENST00000520889 SPTBN5Q9NRC6 3674 aaKnown RBP6.5□□□□□ -1.37
IGHV4-55-201ENST00000520889 CCDC163A0A0D9SF12 145 aa6.49□□□□□ -1.37
IGHV4-55-201ENST00000520889 EDDM13A0A1B0GTR0 161 aa6.49□□□□□ -1.37
IGHV4-55-201ENST00000520889 BCLAF3A2AJT9 711 aaKnown RBP6.49□□□□□ -1.37
IGHV4-55-201ENST00000520889 PRR33A8MZF0 331 aa6.49□□□□□ -1.37
IGHV4-55-201ENST00000520889 CBX4O00257 560 aa6.49□□□□□ -1.37
IGHV4-55-201ENST00000520889 PGRMC1O00264 195 aaKnown RBP6.49□□□□□ -1.37
IGHV4-55-201ENST00000520889 ENC1O14682 589 aa6.49□□□□□ -1.37
IGHV4-55-201ENST00000520889 TRIM24O15164 1050 aa6.49□□□□□ -1.37
IGHV4-55-201ENST00000520889 MATN3O15232 486 aa6.49□□□□□ -1.37
IGHV4-55-201ENST00000520889 MFSD11O43934 449 aa6.49□□□□□ -1.37
IGHV4-55-201ENST00000520889 ZNF500O60304 480 aaPredicted RBP6.49□□□□□ -1.37
IGHV4-55-201ENST00000520889 MAFKO60675 156 aa6.49□□□□□ -1.37
IGHV4-55-201ENST00000520889 CD160O95971 181 aa6.49□□□□□ -1.37
IGHV4-55-201ENST00000520889 GSRP00390 522 aa6.49□□□□□ -1.37
IGHV4-55-201ENST00000520889 EGFP01133 1207 aa6.49□□□□□ -1.37
IGHV4-55-201ENST00000520889 ATP1A1P05023 1023 aaKnown RBP6.49□□□□□ -1.37
IGHV4-55-201ENST00000520889 KRT10P13645 584 aa6.49□□□□□ -1.37
IGHV4-55-201ENST00000520889 CASQ1P31415 396 aa6.49□□□□□ -1.37
IGHV4-55-201ENST00000520889 STIP1P31948 543 aaKnown RBP6.49□□□□□ -1.37
IGHV4-55-201ENST00000520889 ACVRL1P37023 503 aa6.49□□□□□ -1.37
IGHV4-55-201ENST00000520889 MAPK8P45983 427 aa6.49□□□□□ -1.37
IGHV4-55-201ENST00000520889 IFI35P80217 286 aaPredicted RBP6.49□□□□□ -1.37
IGHV4-55-201ENST00000520889 GBE1Q04446 702 aa6.49□□□□□ -1.37
IGHV4-55-201ENST00000520889 KDSRQ06136 332 aa6.49□□□□□ -1.37
IGHV4-55-201ENST00000520889 SFSWAPQ12872 951 aaKnown RBP6.49□□□□□ -1.37
IGHV4-55-201ENST00000520889 SLC10A2Q12908 348 aaPredicted RBP6.49□□□□□ -1.37
IGHV4-55-201ENST00000520889 CAMK2GQ13555 558 aaPredicted RBP6.49□□□□□ -1.37
IGHV4-55-201ENST00000520889 ZNF234Q14588 700 aa6.49□□□□□ -1.37
IGHV4-55-201ENST00000520889 PRKD1Q15139 912 aaPredicted RBP6.49□□□□□ -1.37
IGHV4-55-201ENST00000520889 SLC14A2Q15849 920 aa6.49□□□□□ -1.37
IGHV4-55-201ENST00000520889 HNRNPA1L2Q32P51 320 aaKnown RBP6.49□□□□□ -1.37
IGHV4-55-201ENST00000520889 CWF19L1Q69YN2 538 aaKnown RBP6.49□□□□□ -1.37
IGHV4-55-201ENST00000520889 ALG1LQ6GMV1 187 aa6.49□□□□□ -1.37
IGHV4-55-201ENST00000520889 CDKL3Q8IVW4 592 aaPredicted RBP6.49□□□□□ -1.37
IGHV4-55-201ENST00000520889 CCDC13Q8IYE1 715 aa6.49□□□□□ -1.37
IGHV4-55-201ENST00000520889 FBXL6Q8N531 539 aa6.49□□□□□ -1.37
IGHV4-55-201ENST00000520889 CAMKK1Q8N5S9 505 aa6.49□□□□□ -1.37
IGHV4-55-201ENST00000520889 PCDH20Q8N6Y1 951 aaKnown RBP6.49□□□□□ -1.37
IGHV4-55-201ENST00000520889 ZNF513Q8N8E2 541 aaPredicted RBP6.49□□□□□ -1.37
IGHV4-55-201ENST00000520889 C12orf50Q8NA57 414 aaPredicted RBP6.49□□□□□ -1.37
IGHV4-55-201ENST00000520889 IL17RCQ8NAC3 791 aa6.49□□□□□ -1.37
IGHV4-55-201ENST00000520889 OR7D4Q8NG98 312 aa6.49□□□□□ -1.37
IGHV4-55-201ENST00000520889 TTC8Q8TAM2 541 aa6.49□□□□□ -1.37
IGHV4-55-201ENST00000520889 SLC35B2Q8TB61 432 aa6.49□□□□□ -1.37
IGHV4-55-201ENST00000520889 ACTL9Q8TC94 416 aa6.49□□□□□ -1.37
IGHV4-55-201ENST00000520889 HCAR2Q8TDS4 363 aa6.49□□□□□ -1.37
IGHV4-55-201ENST00000520889 TFB1MQ8WVM0 346 aaKnown RBP6.49□□□□□ -1.37
IGHV4-55-201ENST00000520889 SPOCK2Q92563 424 aa6.49□□□□□ -1.37
IGHV4-55-201ENST00000520889 NKD2Q969F2 451 aaPredicted RBP6.49□□□□□ -1.37
IGHV4-55-201ENST00000520889 HMCESQ96FZ2 354 aa6.49□□□□□ -1.37
IGHV4-55-201ENST00000520889 CCDC114Q96M63 670 aa6.49□□□□□ -1.37
IGHV4-55-201ENST00000520889 PPP1R2P1Q96PQ5 205 aa6.49□□□□□ -1.37
IGHV4-55-201ENST00000520889 PSKH2Q96QS6 385 aa6.49□□□□□ -1.37
IGHV4-55-201ENST00000520889 IL12RB2Q99665 862 aa6.49□□□□□ -1.37
IGHV4-55-201ENST00000520889 C1QTNF1Q9BXJ1 281 aa6.49□□□□□ -1.37
IGHV4-55-201ENST00000520889 COL25A1Q9BXS0 654 aaPredicted RBP6.49□□□□□ -1.37
IGHV4-55-201ENST00000520889 CIPCQ9C0C6 399 aa6.49□□□□□ -1.37
IGHV4-55-201ENST00000520889 MFSD1Q9H3U5 465 aa6.49□□□□□ -1.37
IGHV4-55-201ENST00000520889 SP110Q9HB58 689 aa6.49□□□□□ -1.37
IGHV4-55-201ENST00000520889 KLHL11Q9NVR0 708 aa6.49□□□□□ -1.37
IGHV4-55-201ENST00000520889 DLGAP2Q9P1A6 1054 aa6.49□□□□□ -1.37
IGHV4-55-201ENST00000520889 UBA2Q9UBT2 640 aaPredicted RBP6.49□□□□□ -1.37
IGHV4-55-201ENST00000520889 FEZ2Q9UHY8 353 aaPredicted RBP6.49□□□□□ -1.37
IGHV4-55-201ENST00000520889 HCN2Q9UL51 889 aa6.49□□□□□ -1.37
IGHV4-55-201ENST00000520889 SCML1Q9UN30 329 aa6.49□□□□□ -1.37
IGHV4-55-201ENST00000520889 MFHAS1Q9Y4C4 1052 aa6.49□□□□□ -1.37
IGHV4-55-201ENST00000520889 GOLGA6L10A0A0M3HER8 536 aa6.48□□□□□ -1.37
IGHV4-55-201ENST00000520889 A0A1W2PQ67 120 aa6.48□□□□□ -1.37
IGHV4-55-201ENST00000520889 WASH3PC4AMC7 463 aa6.48□□□□□ -1.37
IGHV4-55-201ENST00000520889 CCDC188H7C350 402 aa6.48□□□□□ -1.37
IGHV4-55-201ENST00000520889 DFFAO00273 331 aa6.48□□□□□ -1.37
IGHV4-55-201ENST00000520889 MCF2LO15068 1137 aa6.48□□□□□ -1.37
IGHV4-55-201ENST00000520889 CEP104O60308 925 aa6.48□□□□□ -1.37
IGHV4-55-201ENST00000520889 RNF40O75150 1001 aa6.48□□□□□ -1.37
IGHV4-55-201ENST00000520889 PEX11BO96011 259 aa6.48□□□□□ -1.37
IGHV4-55-201ENST00000520889 FGGP02679 453 aa6.48□□□□□ -1.37
IGHV4-55-201ENST00000520889 ITGAVP06756 1048 aa6.48□□□□□ -1.37
IGHV4-55-201ENST00000520889 SRCP12931 536 aa6.48□□□□□ -1.37
IGHV4-55-201ENST00000520889 PAFAH1B1P43034 410 aa6.48□□□□□ -1.37
IGHV4-55-201ENST00000520889 CCR3P51677 355 aa6.48□□□□□ -1.37
IGHV4-55-201ENST00000520889 DGKEP52429 567 aa6.48□□□□□ -1.37
IGHV4-55-201ENST00000520889 SNRPD1P62314 119 aaKnown RBP6.48□□□□□ -1.37
IGHV4-55-201ENST00000520889 OTUD4Q01804 1114 aaKnown RBP6.48□□□□□ -1.37
IGHV4-55-201ENST00000520889 LMNB2Q03252 620 aa6.48□□□□□ -1.37
IGHV4-55-201ENST00000520889 ZBTB16Q05516 673 aa6.48□□□□□ -1.37
IGHV4-55-201ENST00000520889 RAD51Q06609 339 aa6.48□□□□□ -1.37
IGHV4-55-201ENST00000520889 ADCY2Q08462 1091 aa6.48□□□□□ -1.37
IGHV4-55-201ENST00000520889 MESP2Q0VG99 397 aa6.48□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms