RNA–Protein interactions for RNA: ENST00000520755.5

LSM1-203, Transcript of LSM1 homolog, mRNA degradation associated, humanhuman

TSL 1 (best) BASIC

Gene LSM1, Length 975 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM1-203ENST00000520755 CHPFQ8IZ52 775 aa15.65■□□□□ 0.1
LSM1-203ENST00000520755 LZTR1Q8N653 840 aa15.65■□□□□ 0.1
LSM1-203ENST00000520755 IL17RCQ8NAC3 791 aa15.65■□□□□ 0.1
LSM1-203ENST00000520755 SLC35B2Q8TB61 432 aa15.65■□□□□ 0.1
LSM1-203ENST00000520755 KCNV2Q8TDN2 545 aa15.65■□□□□ 0.1
LSM1-203ENST00000520755 C1orf54Q8WWF1 131 aa15.65■□□□□ 0.1
LSM1-203ENST00000520755 ARHGEF2Q92974 986 aaKnown RBP15.65■□□□□ 0.1
LSM1-203ENST00000520755 TTC17Q96AE7 1141 aa15.65■□□□□ 0.1
LSM1-203ENST00000520755 AP1M1Q9BXS5 423 aa15.65■□□□□ 0.1
LSM1-203ENST00000520755 ATP13A1Q9HD20 1204 aa15.65■□□□□ 0.1
LSM1-203ENST00000520755 POLR3BQ9NW08 1133 aaPredicted RBP15.65■□□□□ 0.1
LSM1-203ENST00000520755 CACNA2D2Q9NY47 1150 aa15.65■□□□□ 0.1
LSM1-203ENST00000520755 PLA2G4CQ9UP65 541 aa15.65■□□□□ 0.1
LSM1-203ENST00000520755 CUL9Q8IWT3 2517 aa15.65■□□□□ 0.1
LSM1-203ENST00000520755 CHURC1-FNTBB4DL54 471 aa15.64■□□□□ 0.09
LSM1-203ENST00000520755 DFFAO00273 331 aa15.64■□□□□ 0.09
LSM1-203ENST00000520755 ASLP04424 464 aa15.64■□□□□ 0.09
LSM1-203ENST00000520755 DLDP09622 509 aaKnown RBP15.64■□□□□ 0.09
LSM1-203ENST00000520755 CHRM1P11229 460 aaPredicted RBP15.64■□□□□ 0.09
LSM1-203ENST00000520755 VAV1P15498 845 aa15.64■□□□□ 0.09
LSM1-203ENST00000520755 NR2C2P49116 596 aa15.64■□□□□ 0.09
LSM1-203ENST00000520755 PAPOLAP51003 745 aaKnown RBP15.64■□□□□ 0.09
LSM1-203ENST00000520755 PLK1P53350 603 aa15.64■□□□□ 0.09
LSM1-203ENST00000520755 YBEYP58557 167 aaPredicted RBP15.64■□□□□ 0.09
LSM1-203ENST00000520755 ECT2LQ008S8 904 aa15.64■□□□□ 0.09
LSM1-203ENST00000520755 SERINC3Q13530 473 aa15.64■□□□□ 0.09
LSM1-203ENST00000520755 ZNF234Q14588 700 aa15.64■□□□□ 0.09
LSM1-203ENST00000520755 POLD3Q15054 466 aaPredicted RBP15.64■□□□□ 0.09
LSM1-203ENST00000520755 CYP1B1Q16678 543 aa15.64■□□□□ 0.09
LSM1-203ENST00000520755 PARP15Q460N3 678 aa15.64■□□□□ 0.09
LSM1-203ENST00000520755 FNDC3BQ53EP0 1204 aaKnown RBP15.64■□□□□ 0.09
LSM1-203ENST00000520755 IL31Q6EBC2 164 aa15.64■□□□□ 0.09
LSM1-203ENST00000520755 SDE2Q6IQ49 451 aa15.64■□□□□ 0.09
LSM1-203ENST00000520755 ZNF572Q7Z3I7 529 aaPredicted RBP15.64■□□□□ 0.09
LSM1-203ENST00000520755 TRMT11Q7Z4G4 463 aaKnown RBP15.64■□□□□ 0.09
LSM1-203ENST00000520755 ZNF354CQ86Y25 554 aa15.64■□□□□ 0.09
LSM1-203ENST00000520755 SPEM1Q8N4L4 309 aa15.64■□□□□ 0.09
LSM1-203ENST00000520755 C12orf50Q8NA57 414 aaPredicted RBP15.64■□□□□ 0.09
LSM1-203ENST00000520755 DTWD2Q8NBA8 298 aa15.64■□□□□ 0.09
LSM1-203ENST00000520755 P3H4Q92791 437 aa15.64■□□□□ 0.09
LSM1-203ENST00000520755 ACDQ96AP0 544 aa15.64■□□□□ 0.09
LSM1-203ENST00000520755 HDAC11Q96DB2 347 aa15.64■□□□□ 0.09
LSM1-203ENST00000520755 ERLEC1Q96DZ1 483 aa15.64■□□□□ 0.09
LSM1-203ENST00000520755 IER2Q9BTL4 223 aa15.64■□□□□ 0.09
LSM1-203ENST00000520755 ACE2Q9BYF1 805 aaPredicted RBP15.64■□□□□ 0.09
LSM1-203ENST00000520755 MAGEH1Q9H213 219 aa15.64■□□□□ 0.09
LSM1-203ENST00000520755 L2HGDHQ9H9P8 463 aa15.64■□□□□ 0.09
LSM1-203ENST00000520755 PDFQ9HBH1 243 aa15.64■□□□□ 0.09
LSM1-203ENST00000520755 C2orf42Q9NWW7 574 aa15.64■□□□□ 0.09
LSM1-203ENST00000520755 DONSONQ9NYP3 566 aa15.64■□□□□ 0.09
LSM1-203ENST00000520755 THAP10Q9P2Z0 257 aaPredicted RBP15.64■□□□□ 0.09
LSM1-203ENST00000520755 SLC25A13Q9UJS0 675 aa15.64■□□□□ 0.09
LSM1-203ENST00000520755 DNPEPQ9ULA0 475 aa15.64■□□□□ 0.09
LSM1-203ENST00000520755 ERVW-1Q9UQF0 538 aa15.64■□□□□ 0.09
LSM1-203ENST00000520755 ZDBF2Q9HCK1 2354 aa15.63■□□□□ 0.09
LSM1-203ENST00000520755 WASH3PC4AMC7 463 aa15.63■□□□□ 0.09
LSM1-203ENST00000520755 SGK1O00141 431 aa15.63■□□□□ 0.09
LSM1-203ENST00000520755 CBX4O00257 560 aa15.63■□□□□ 0.09
LSM1-203ENST00000520755 LIASO43766 372 aa15.63■□□□□ 0.09
LSM1-203ENST00000520755 SNAP91O60641 907 aa15.63■□□□□ 0.09
LSM1-203ENST00000520755 ADAM23O75077 832 aa15.63■□□□□ 0.09
LSM1-203ENST00000520755 ZMPSTE24O75844 475 aa15.63■□□□□ 0.09
LSM1-203ENST00000520755 HNRNPLP14866 589 aaKnown RBP eCLIP15.63■□□□□ 0.093e-7■□□□□ 9.9
LSM1-203ENST00000520755 NTSR1P30989 418 aa15.63■□□□□ 0.09
LSM1-203ENST00000520755 ETFBP38117 255 aa15.63■□□□□ 0.09
LSM1-203ENST00000520755 GARSP41250 739 aaKnown RBP15.63■□□□□ 0.09
LSM1-203ENST00000520755 IL12RB1P42701 662 aa15.63■□□□□ 0.09
LSM1-203ENST00000520755 STK19P49842 368 aaPredicted RBP15.63■□□□□ 0.09
LSM1-203ENST00000520755 ST8SIA6P61647 398 aa15.63■□□□□ 0.09
LSM1-203ENST00000520755 SATB1Q01826 763 aa15.63■□□□□ 0.09
LSM1-203ENST00000520755 SULT2A1Q06520 285 aa15.63■□□□□ 0.09
LSM1-203ENST00000520755 PPIDQ08752 370 aaKnown RBP15.63■□□□□ 0.09
LSM1-203ENST00000520755 PRKD1Q15139 912 aaPredicted RBP15.63■□□□□ 0.09
LSM1-203ENST00000520755 OASLQ15646 514 aaKnown RBP15.63■□□□□ 0.09
LSM1-203ENST00000520755 PTPRNQ16849 979 aa15.63■□□□□ 0.09
LSM1-203ENST00000520755 WHAMMP3Q1A5X7 153 aa15.63■□□□□ 0.09
LSM1-203ENST00000520755 EOGTQ5NDL2 527 aa15.63■□□□□ 0.09
LSM1-203ENST00000520755 FAM182AQ5T1J6 154 aa15.63■□□□□ 0.09
LSM1-203ENST00000520755 CCDC181Q5TID7 509 aa15.63■□□□□ 0.09
LSM1-203ENST00000520755 TTC27Q6P3X3 843 aa15.63■□□□□ 0.09
LSM1-203ENST00000520755 SERPINA13PQ6UXR4 307 aa15.63■□□□□ 0.09
LSM1-203ENST00000520755 ZC3H18Q86VM9 953 aaKnown RBP15.63■□□□□ 0.09
LSM1-203ENST00000520755 DCAF4L2Q8NA75 395 aa15.63■□□□□ 0.09
LSM1-203ENST00000520755 ZNF419Q96HQ0 510 aaPredicted RBP15.63■□□□□ 0.09
LSM1-203ENST00000520755 RPL10LQ96L21 214 aaKnown RBP15.63■□□□□ 0.09
LSM1-203ENST00000520755 QKIQ96PU8 341 aaKnown RBP eCLIP15.63■□□□□ 0.091e-14■■■■□ 21.3
LSM1-203ENST00000520755 NAP1L3Q99457 506 aaPredicted RBP15.63■□□□□ 0.09
LSM1-203ENST00000520755 LGMNQ99538 433 aa15.63■□□□□ 0.09
LSM1-203ENST00000520755 C2orf49Q9BVC5 232 aaPredicted RBP15.63■□□□□ 0.09
LSM1-203ENST00000520755 C10orf88Q9H8K7 445 aa15.63■□□□□ 0.09
LSM1-203ENST00000520755 RNF14Q9UBS8 474 aa15.63■□□□□ 0.09
LSM1-203ENST00000520755 VPS51Q9UID3 782 aa15.63■□□□□ 0.09
LSM1-203ENST00000520755 MMP17Q9ULZ9 603 aa15.63■□□□□ 0.09
LSM1-203ENST00000520755 ACTL7AQ9Y615 435 aa15.63■□□□□ 0.09
LSM1-203ENST00000520755 RAD54BQ9Y620 910 aa15.63■□□□□ 0.09
LSM1-203ENST00000520755 STON1Q9Y6Q2 735 aa15.63■□□□□ 0.09
LSM1-203ENST00000520755 ARHGAP42A6NI28 874 aa15.62■□□□□ 0.09
LSM1-203ENST00000520755 J3KR12 359 aa15.62■□□□□ 0.09
LSM1-203ENST00000520755 KRIT1O00522 736 aa15.62■□□□□ 0.09
LSM1-203ENST00000520755 MAFKO60675 156 aa15.62■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms