RNA–Protein interactions for RNA: ENST00000520532.5

TRAPPC9-207, Transcript of trafficking protein particle complex 9, humanhuman

TSL 5

Gene TRAPPC9, Length 560 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-207ENST00000520532 C11orf63Q6NUN7 778 aa7.58□□□□□ -1.2
TRAPPC9-207ENST00000520532 KIAA1324Q6UXG2 1013 aaKnown RBP7.58□□□□□ -1.2
TRAPPC9-207ENST00000520532 CYP2U1Q7Z449 544 aa7.58□□□□□ -1.2
TRAPPC9-207ENST00000520532 PHLDB2Q86SQ0 1253 aa7.58□□□□□ -1.2
TRAPPC9-207ENST00000520532 FAM72BQ86X60 149 aa7.58□□□□□ -1.2
TRAPPC9-207ENST00000520532 TMTC1Q8IUR5 882 aa7.58□□□□□ -1.2
TRAPPC9-207ENST00000520532 LRRC49Q8IUZ0 686 aa7.58□□□□□ -1.2
TRAPPC9-207ENST00000520532 PGBD3Q8N328 593 aa7.58□□□□□ -1.2
TRAPPC9-207ENST00000520532 ARFGAP1Q8N6T3 406 aa7.58□□□□□ -1.2
TRAPPC9-207ENST00000520532 OR8D1Q8WZ84 308 aa7.58□□□□□ -1.2
TRAPPC9-207ENST00000520532 PTPRN2Q92932 1015 aa7.58□□□□□ -1.2
TRAPPC9-207ENST00000520532 ARHGEF26Q96DR7 871 aa7.58□□□□□ -1.2
TRAPPC9-207ENST00000520532 PPP1R16AQ96I34 528 aa7.58□□□□□ -1.2
TRAPPC9-207ENST00000520532 PEBP4Q96S96 227 aa7.58□□□□□ -1.2
TRAPPC9-207ENST00000520532 TRIM7Q9C029 511 aa7.58□□□□□ -1.2
TRAPPC9-207ENST00000520532 RAB6CQ9H0N0 254 aa7.58□□□□□ -1.2
TRAPPC9-207ENST00000520532 PABPC3Q9H361 631 aaKnown RBP7.58□□□□□ -1.2
TRAPPC9-207ENST00000520532 DHX35Q9H5Z1 703 aaKnown RBP7.58□□□□□ -1.2
TRAPPC9-207ENST00000520532 LRRC19Q9H756 370 aa7.58□□□□□ -1.2
TRAPPC9-207ENST00000520532 SGK2Q9HBY8 427 aa7.58□□□□□ -1.2
TRAPPC9-207ENST00000520532 OSGEPQ9NPF4 335 aa7.58□□□□□ -1.2
TRAPPC9-207ENST00000520532 VPS45Q9NRW7 570 aa7.58□□□□□ -1.2
TRAPPC9-207ENST00000520532 STAU2Q9NUL3 570 aaKnown RBP eCLIP7.58□□□□□ -1.2
TRAPPC9-207ENST00000520532 WSB2Q9NYS7 404 aaPredicted RBP7.58□□□□□ -1.2
TRAPPC9-207ENST00000520532 EVLQ9UI08 416 aaPredicted RBP7.58□□□□□ -1.2
TRAPPC9-207ENST00000520532 FARP1Q9Y4F1 1045 aaPredicted RBP7.58□□□□□ -1.2
TRAPPC9-207ENST00000520532 FAM170AA1A519 330 aa7.57□□□□□ -1.2
TRAPPC9-207ENST00000520532 BCLAF3A2AJT9 711 aaKnown RBP7.57□□□□□ -1.2
TRAPPC9-207ENST00000520532 ARHGAP42A6NI28 874 aa7.57□□□□□ -1.2
TRAPPC9-207ENST00000520532 TTC34A8MYJ7 566 aa7.57□□□□□ -1.2
TRAPPC9-207ENST00000520532 PRR5-ARHGAP8B1AHC4 643 aa7.57□□□□□ -1.2
TRAPPC9-207ENST00000520532 C10orf142B7Z368 130 aa7.57□□□□□ -1.2
TRAPPC9-207ENST00000520532 CBX4O00257 560 aa7.57□□□□□ -1.2
TRAPPC9-207ENST00000520532 PSTPIP1O43586 416 aa7.57□□□□□ -1.2
TRAPPC9-207ENST00000520532 KDELR3O43731 214 aa7.57□□□□□ -1.2
TRAPPC9-207ENST00000520532 CREB3O43889 395 aa7.57□□□□□ -1.2
TRAPPC9-207ENST00000520532 NDUFA10O95299 355 aa7.57□□□□□ -1.2
TRAPPC9-207ENST00000520532 ZNF806P0C7X5 589 aa7.57□□□□□ -1.2
TRAPPC9-207ENST00000520532 HLA-EP13747 358 aa7.57□□□□□ -1.2
TRAPPC9-207ENST00000520532 CTSOP43234 321 aaPredicted RBP7.57□□□□□ -1.2
TRAPPC9-207ENST00000520532 RECQLP46063 649 aaPredicted RBP7.57□□□□□ -1.2
TRAPPC9-207ENST00000520532 STK19P49842 368 aaPredicted RBP7.57□□□□□ -1.2
TRAPPC9-207ENST00000520532 LIMK1P53667 647 aa7.57□□□□□ -1.2
TRAPPC9-207ENST00000520532 RPS14P62263 151 aaKnown RBP7.57□□□□□ -1.2
TRAPPC9-207ENST00000520532 ARHGAP8P85298 464 aa7.57□□□□□ -1.2
TRAPPC9-207ENST00000520532 RPL6Q02878 288 aaKnown RBP7.57□□□□□ -1.2
TRAPPC9-207ENST00000520532 SRSF5Q13243 272 aaKnown RBP7.57□□□□□ -1.2
TRAPPC9-207ENST00000520532 SERINC3Q13530 473 aa7.57□□□□□ -1.2
TRAPPC9-207ENST00000520532 RFTN1Q14699 578 aaPredicted RBP7.57□□□□□ -1.2
TRAPPC9-207ENST00000520532 DLG2Q15700 870 aa7.57□□□□□ -1.2
TRAPPC9-207ENST00000520532 WDR45BQ5MNZ6 344 aa7.57□□□□□ -1.2
TRAPPC9-207ENST00000520532 SYCP2LQ5T4T6 812 aa7.57□□□□□ -1.2
TRAPPC9-207ENST00000520532 IL31Q6EBC2 164 aa7.57□□□□□ -1.2
TRAPPC9-207ENST00000520532 TMCO3Q6UWJ1 677 aa7.57□□□□□ -1.2
TRAPPC9-207ENST00000520532 Q6ZVU0 165 aa7.57□□□□□ -1.2
TRAPPC9-207ENST00000520532 SYT12Q8IV01 421 aa7.57□□□□□ -1.2
TRAPPC9-207ENST00000520532 MAP7D3Q8IWC1 876 aa7.57□□□□□ -1.2
TRAPPC9-207ENST00000520532 ATP11CQ8NB49 1132 aa7.57□□□□□ -1.2
TRAPPC9-207ENST00000520532 TMIEQ8NEW7 156 aa7.57□□□□□ -1.2
TRAPPC9-207ENST00000520532 OR2A12Q8NGT7 310 aa7.57□□□□□ -1.2
TRAPPC9-207ENST00000520532 CEP76Q8TAP6 659 aa7.57□□□□□ -1.2
TRAPPC9-207ENST00000520532 UBE2Q2Q8WVN8 375 aa7.57□□□□□ -1.2
TRAPPC9-207ENST00000520532 SPOCK2Q92563 424 aa7.57□□□□□ -1.2
TRAPPC9-207ENST00000520532 TSC1Q92574 1164 aa7.57□□□□□ -1.2
TRAPPC9-207ENST00000520532 FATE1Q969F0 183 aa7.57□□□□□ -1.2
TRAPPC9-207ENST00000520532 FAF2Q96CS3 445 aa7.57□□□□□ -1.2
TRAPPC9-207ENST00000520532 RPL10LQ96L21 214 aaKnown RBP7.57□□□□□ -1.2
TRAPPC9-207ENST00000520532 GDAP1L1Q96MZ0 367 aa7.57□□□□□ -1.2
TRAPPC9-207ENST00000520532 ZNF599Q96NL3 588 aa7.57□□□□□ -1.2
TRAPPC9-207ENST00000520532 CHP1Q99653 195 aa7.57□□□□□ -1.2
TRAPPC9-207ENST00000520532 HINFPQ9BQA5 517 aa7.57□□□□□ -1.2
TRAPPC9-207ENST00000520532 OSBPL1AQ9BXW6 950 aa7.57□□□□□ -1.2
TRAPPC9-207ENST00000520532 PACSIN1Q9BY11 444 aa7.57□□□□□ -1.2
TRAPPC9-207ENST00000520532 BTBD1Q9H0C5 482 aa7.57□□□□□ -1.2
TRAPPC9-207ENST00000520532 PDFQ9HBH1 243 aa7.57□□□□□ -1.2
TRAPPC9-207ENST00000520532 SPTLC3Q9NUV7 552 aa7.57□□□□□ -1.2
TRAPPC9-207ENST00000520532 HAUS2Q9NVX0 235 aa7.57□□□□□ -1.2
TRAPPC9-207ENST00000520532 POLR3BQ9NW08 1133 aaPredicted RBP7.57□□□□□ -1.2
TRAPPC9-207ENST00000520532 MBD1Q9UIS9 605 aaPredicted RBP7.57□□□□□ -1.2
TRAPPC9-207ENST00000520532 CYP8B1Q9UNU6 501 aa7.57□□□□□ -1.2
TRAPPC9-207ENST00000520532 NCKAP1Q9Y2A7 1128 aa7.57□□□□□ -1.2
TRAPPC9-207ENST00000520532 SHROOM3Q8TF72 1996 aa7.57□□□□□ -1.2
TRAPPC9-207ENST00000520532 RASA4BC9J798 803 aa7.56□□□□□ -1.2
TRAPPC9-207ENST00000520532 DCLK1O15075 740 aa7.56□□□□□ -1.2
TRAPPC9-207ENST00000520532 MAP3K13O43283 966 aa7.56□□□□□ -1.2
TRAPPC9-207ENST00000520532 RASA4O43374 803 aa7.56□□□□□ -1.2
TRAPPC9-207ENST00000520532 PLRG1O43660 514 aaKnown RBP7.56□□□□□ -1.2
TRAPPC9-207ENST00000520532 PRAMEF11O60813 436 aa7.56□□□□□ -1.2
TRAPPC9-207ENST00000520532 NDUFS2O75306 463 aa7.56□□□□□ -1.2
TRAPPC9-207ENST00000520532 SEMA4FO95754 770 aa7.56□□□□□ -1.2
TRAPPC9-207ENST00000520532 IGSF6O95976 241 aa7.56□□□□□ -1.2
TRAPPC9-207ENST00000520532 RARAP10276 462 aa7.56□□□□□ -1.2
TRAPPC9-207ENST00000520532 GOT1P17174 413 aa7.56□□□□□ -1.2
TRAPPC9-207ENST00000520532 ERCC2P18074 760 aa7.56□□□□□ -1.2
TRAPPC9-207ENST00000520532 BCKDHBP21953 392 aa7.56□□□□□ -1.2
TRAPPC9-207ENST00000520532 ITGB7P26010 798 aa7.56□□□□□ -1.2
TRAPPC9-207ENST00000520532 IL1R2P27930 398 aa7.56□□□□□ -1.2
TRAPPC9-207ENST00000520532 HSPA9P38646 679 aaKnown RBP7.56□□□□□ -1.2
TRAPPC9-207ENST00000520532 MAPK8P45983 427 aa7.56□□□□□ -1.2
TRAPPC9-207ENST00000520532 SUOXP51687 545 aa7.56□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms