RNA–Protein interactions for RNA: ENST00000520276.5

TRPS1-211, Transcript of transcriptional repressor GATA binding 1, humanhuman

TSL 2 BASIC

Gene TRPS1, Length 4,083 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPS1-211ENST00000520276 USTQ9Y2C2 406 aa10.29□□□□□ -0.76
TRPS1-211ENST00000520276 COPEO14579 308 aa10.28□□□□□ -0.76
TRPS1-211ENST00000520276 KDM1AO60341 852 aa10.28□□□□□ -0.76
TRPS1-211ENST00000520276 IL18RAPO95256 599 aa10.28□□□□□ -0.76
TRPS1-211ENST00000520276 POMCP01189 267 aa10.28□□□□□ -0.76
TRPS1-211ENST00000520276 SLC18A2Q05940 514 aa10.28□□□□□ -0.76
TRPS1-211ENST00000520276 TBCCQ15814 346 aa10.28□□□□□ -0.76
TRPS1-211ENST00000520276 GLRA4Q5JXX5 417 aa10.28□□□□□ -0.76
TRPS1-211ENST00000520276 CCSAPQ6IQ19 270 aaPredicted RBP10.28□□□□□ -0.76
TRPS1-211ENST00000520276 PLEKHA7Q6IQ23 1121 aa10.28□□□□□ -0.76
TRPS1-211ENST00000520276 ATG14Q6ZNE5 492 aa10.28□□□□□ -0.76
TRPS1-211ENST00000520276 BTLAQ7Z6A9 289 aa10.28□□□□□ -0.76
TRPS1-211ENST00000520276 CADM3Q8N126 398 aa10.28□□□□□ -0.76
TRPS1-211ENST00000520276 PCYOX1LQ8NBM8 494 aa10.28□□□□□ -0.76
TRPS1-211ENST00000520276 PTCD2Q8WV60 388 aaKnown RBP10.28□□□□□ -0.76
TRPS1-211ENST00000520276 GAD1Q99259 594 aa10.28□□□□□ -0.76
TRPS1-211ENST00000520276 H3BNH8 94 aa10.28□□□□□ -0.76
TRPS1-211ENST00000520276 B4GALT5O43286 388 aa10.28□□□□□ -0.76
TRPS1-211ENST00000520276 ARPP19P56211 112 aa10.28□□□□□ -0.76
TRPS1-211ENST00000520276 EIF3EP60228 445 aaKnown RBP10.28□□□□□ -0.76
TRPS1-211ENST00000520276 OTUD4Q01804 1114 aaKnown RBP10.28□□□□□ -0.76
TRPS1-211ENST00000520276 BFSP1Q12934 665 aa10.28□□□□□ -0.76
TRPS1-211ENST00000520276 RGS21Q2M5E4 152 aa10.28□□□□□ -0.76
TRPS1-211ENST00000520276 BBS9Q3SYG4 887 aa10.28□□□□□ -0.76
TRPS1-211ENST00000520276 POLNQ7Z5Q5 900 aa10.28□□□□□ -0.76
TRPS1-211ENST00000520276 SETD3Q86TU7 594 aaPredicted RBP10.28□□□□□ -0.76
TRPS1-211ENST00000520276 SIX5Q8N196 739 aa10.28□□□□□ -0.76
TRPS1-211ENST00000520276 ZSWIM2Q8NEG5 633 aa10.28□□□□□ -0.76
TRPS1-211ENST00000520276 BSNDQ8WZ55 320 aa10.28□□□□□ -0.76
TRPS1-211ENST00000520276 ACSF2Q96CM8 615 aaPredicted RBP10.28□□□□□ -0.76
TRPS1-211ENST00000520276 MAELQ96JY0 434 aaKnown RBP10.28□□□□□ -0.76
TRPS1-211ENST00000520276 HERC2P3Q9BVR0 1158 aa10.28□□□□□ -0.76
TRPS1-211ENST00000520276 SEMA6AQ9H2E6 1030 aa10.28□□□□□ -0.76
TRPS1-211ENST00000520276 EXTL3O43909 919 aa10.28□□□□□ -0.76
TRPS1-211ENST00000520276 CD4P01730 458 aa10.28□□□□□ -0.76
TRPS1-211ENST00000520276 FGFR3P22607 806 aa10.28□□□□□ -0.76
TRPS1-211ENST00000520276 PCYT1AP49585 367 aa10.28□□□□□ -0.76
TRPS1-211ENST00000520276 RAB15P59190 212 aa10.28□□□□□ -0.76
TRPS1-211ENST00000520276 CLEC16AQ2KHT3 1053 aa10.28□□□□□ -0.76
TRPS1-211ENST00000520276 AARS2Q5JTZ9 985 aaKnown RBP10.28□□□□□ -0.76
TRPS1-211ENST00000520276 RWDD4Q6NW29 188 aaKnown RBP10.28□□□□□ -0.76
TRPS1-211ENST00000520276 LYSMD3Q7Z3D4 306 aa10.28□□□□□ -0.76
TRPS1-211ENST00000520276 MAVSQ7Z434 540 aa10.28□□□□□ -0.76
TRPS1-211ENST00000520276 MAP4K3Q8IVH8 894 aa10.28□□□□□ -0.76
TRPS1-211ENST00000520276 KBTBD7Q8WVZ9 684 aa10.28□□□□□ -0.76
TRPS1-211ENST00000520276 DHX38Q92620 1227 aaKnown RBP10.28□□□□□ -0.76
TRPS1-211ENST00000520276 RPF2Q9H7B2 306 aaKnown RBP10.28□□□□□ -0.76
TRPS1-211ENST00000520276 SAE1Q9UBE0 346 aaPredicted RBP10.28□□□□□ -0.76
TRPS1-211ENST00000520276 NXF1Q9UBU9 619 aaKnown RBP10.28□□□□□ -0.76
TRPS1-211ENST00000520276 UBQLN1Q9UMX0 589 aaKnown RBP10.28□□□□□ -0.76
TRPS1-211ENST00000520276 PCDHGA3Q9Y5H0 932 aa10.28□□□□□ -0.76
TRPS1-211ENST00000520276 MYH9P35579 1960 aaKnown RBP10.28□□□□□ -0.76
TRPS1-211ENST00000520276 CCDC162PA2VCL2 907 aa10.28□□□□□ -0.76
TRPS1-211ENST00000520276 CARNS1A5YM72 827 aa10.28□□□□□ -0.76
TRPS1-211ENST00000520276 H3BMQ9 156 aa10.28□□□□□ -0.76
TRPS1-211ENST00000520276 KIAA0355O15063 1070 aa10.28□□□□□ -0.76
TRPS1-211ENST00000520276 CYP11B1P15538 503 aa10.28□□□□□ -0.76
TRPS1-211ENST00000520276 XRCC1P18887 633 aaPredicted RBP10.28□□□□□ -0.76
TRPS1-211ENST00000520276 MXI1P50539 228 aa10.28□□□□□ -0.76
TRPS1-211ENST00000520276 YWHAEP62258 255 aaKnown RBP10.28□□□□□ -0.76
TRPS1-211ENST00000520276 GTF2BQ00403 316 aa10.28□□□□□ -0.76
TRPS1-211ENST00000520276 PPP2R5DQ14738 602 aa10.28□□□□□ -0.76
TRPS1-211ENST00000520276 TIGD2Q4W5G0 525 aa10.28□□□□□ -0.76
TRPS1-211ENST00000520276 GPR141Q7Z602 305 aa10.28□□□□□ -0.76
TRPS1-211ENST00000520276 NUDCD3Q8IVD9 361 aa10.28□□□□□ -0.76
TRPS1-211ENST00000520276 PALM2Q8IXS6 379 aa10.28□□□□□ -0.76
TRPS1-211ENST00000520276 MYO1HQ8N1T3 1032 aa10.28□□□□□ -0.76
TRPS1-211ENST00000520276 ZBTB45Q96K62 511 aaPredicted RBP10.28□□□□□ -0.76
TRPS1-211ENST00000520276 ZNF560Q96MR9 790 aa10.28□□□□□ -0.76
TRPS1-211ENST00000520276 COG8Q96MW5 612 aa10.28□□□□□ -0.76
TRPS1-211ENST00000520276 AGPAT3Q9NRZ7 376 aa10.28□□□□□ -0.76
TRPS1-211ENST00000520276 ITM2BQ9Y287 266 aa10.28□□□□□ -0.76
TRPS1-211ENST00000520276 HES2Q9Y543 173 aa10.28□□□□□ -0.76
TRPS1-211ENST00000520276 S100BP04271 92 aaPredicted RBP10.27□□□□□ -0.77
TRPS1-211ENST00000520276 ENDOUP21128 410 aaKnown RBP10.27□□□□□ -0.77
TRPS1-211ENST00000520276 TUFMP49411 452 aaKnown RBP10.27□□□□□ -0.77
TRPS1-211ENST00000520276 NRLP54845 237 aa10.27□□□□□ -0.77
TRPS1-211ENST00000520276 SNRNP35Q16560 246 aaKnown RBP10.27□□□□□ -0.77
TRPS1-211ENST00000520276 KLHL38Q2WGJ6 581 aa10.27□□□□□ -0.77
TRPS1-211ENST00000520276 PPP2R2DQ66LE6 453 aa10.27□□□□□ -0.77
TRPS1-211ENST00000520276 CHRDL2Q6WN34 429 aa10.27□□□□□ -0.77
TRPS1-211ENST00000520276 PTAR1Q7Z6K3 402 aaPredicted RBP10.27□□□□□ -0.77
TRPS1-211ENST00000520276 SNX29P2Q8IUI4 249 aa10.27□□□□□ -0.77
TRPS1-211ENST00000520276 FAM71AQ8IYT1 594 aa10.27□□□□□ -0.77
TRPS1-211ENST00000520276 CPA5Q8WXQ8 436 aa10.27□□□□□ -0.77
TRPS1-211ENST00000520276 ACO2Q99798 780 aaKnown RBP10.27□□□□□ -0.77
TRPS1-211ENST00000520276 PPCSQ9HAB8 311 aa10.27□□□□□ -0.77
TRPS1-211ENST00000520276 XAB2Q9HCS7 855 aaKnown RBP10.27□□□□□ -0.77
TRPS1-211ENST00000520276 SIRPGQ9P1W8 387 aa10.27□□□□□ -0.77
TRPS1-211ENST00000520276 PDE4DIPQ5VU43 2346 aa10.27□□□□□ -0.77
TRPS1-211ENST00000520276 TRIM49D1C9J1S8 452 aa10.27□□□□□ -0.77
TRPS1-211ENST00000520276 PFDN6O15212 129 aa10.27□□□□□ -0.77
TRPS1-211ENST00000520276 TSPAN1O60635 241 aa10.27□□□□□ -0.77
TRPS1-211ENST00000520276 KLHL41O60662 606 aa10.27□□□□□ -0.77
TRPS1-211ENST00000520276 HUS1O60921 280 aa10.27□□□□□ -0.77
TRPS1-211ENST00000520276 RECQL4O94761 1208 aa10.27□□□□□ -0.77
TRPS1-211ENST00000520276 B3GAT3O94766 335 aa10.27□□□□□ -0.77
TRPS1-211ENST00000520276 CHRNA1P02708 482 aa10.27□□□□□ -0.77
TRPS1-211ENST00000520276 ZNF26P17031 533 aaPredicted RBP10.27□□□□□ -0.77
TRPS1-211ENST00000520276 NCF2P19878 526 aaPredicted RBP10.27□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms