RNA–Protein interactions for RNA: ENST00000520062.1

HMGB1P46-201, Transcript of high mobility group box 1 pseudogene 46, humanhuman

BASIC

Gene HMGB1P46, Length 610 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P46-201ENST00000520062 PORP16435 677 aaPredicted RBP5.68□□□□□ -1.5
HMGB1P46-201ENST00000520062 ZNF8P17098 575 aaPredicted RBP5.68□□□□□ -1.5
HMGB1P46-201ENST00000520062 NFKBIAP25963 317 aa5.68□□□□□ -1.5
HMGB1P46-201ENST00000520062 OLR1P78380 273 aa5.68□□□□□ -1.5
HMGB1P46-201ENST00000520062 ZBTB16Q05516 673 aa5.68□□□□□ -1.5
HMGB1P46-201ENST00000520062 PUM1Q14671 1186 aaKnown RBP eCLIP5.68□□□□□ -1.5
HMGB1P46-201ENST00000520062 GSTA3Q16772 222 aa5.68□□□□□ -1.5
HMGB1P46-201ENST00000520062 C5orf22Q49AR2 442 aa5.68□□□□□ -1.5
HMGB1P46-201ENST00000520062 DUSP28Q4G0W2 176 aa5.68□□□□□ -1.5
HMGB1P46-201ENST00000520062 FBLN7Q53RD9 439 aa5.68□□□□□ -1.5
HMGB1P46-201ENST00000520062 CFAP58Q5T655 872 aa5.68□□□□□ -1.5
HMGB1P46-201ENST00000520062 TSTD2Q5T7W7 516 aa5.68□□□□□ -1.5
HMGB1P46-201ENST00000520062 NCEH1Q6PIU2 408 aa5.68□□□□□ -1.5
HMGB1P46-201ENST00000520062 IL20RBQ6UXL0 311 aa5.68□□□□□ -1.5
HMGB1P46-201ENST00000520062 IKBIPQ70UQ0 350 aa5.68□□□□□ -1.5
HMGB1P46-201ENST00000520062 ENOSF1Q7L5Y1 443 aa5.68□□□□□ -1.5
HMGB1P46-201ENST00000520062 SPRED1Q7Z699 444 aa5.68□□□□□ -1.5
HMGB1P46-201ENST00000520062 PRRT2Q7Z6L0 340 aaPredicted RBP5.68□□□□□ -1.5
HMGB1P46-201ENST00000520062 TFAP2DQ7Z6R9 452 aa5.68□□□□□ -1.5
HMGB1P46-201ENST00000520062 TADA2BQ86TJ2 420 aa5.68□□□□□ -1.5
HMGB1P46-201ENST00000520062 CNTROBQ8N137 903 aa5.68□□□□□ -1.5
HMGB1P46-201ENST00000520062 GHDCQ8N2G8 530 aa5.68□□□□□ -1.5
HMGB1P46-201ENST00000520062 TTC39CQ8N584 583 aa5.68□□□□□ -1.5
HMGB1P46-201ENST00000520062 FAM120BQ96EK7 910 aaKnown RBP5.68□□□□□ -1.5
HMGB1P46-201ENST00000520062 KLHL15Q96M94 604 aa5.68□□□□□ -1.5
HMGB1P46-201ENST00000520062 TEFMQ96QE5 360 aaKnown RBP5.68□□□□□ -1.5
HMGB1P46-201ENST00000520062 GOLGA2P5Q9HBQ8 144 aa5.68□□□□□ -1.5
HMGB1P46-201ENST00000520062 PCDHB16Q9NRJ7 776 aa5.68□□□□□ -1.5
HMGB1P46-201ENST00000520062 PLSCR4Q9NRQ2 329 aa5.68□□□□□ -1.5
HMGB1P46-201ENST00000520062 MTPAPQ9NVV4 582 aaKnown RBP eCLIP5.68□□□□□ -1.5
HMGB1P46-201ENST00000520062 HSPB7Q9UBY9 170 aa5.68□□□□□ -1.5
HMGB1P46-201ENST00000520062 TNFSF13BQ9Y275 285 aa5.68□□□□□ -1.5
HMGB1P46-201ENST00000520062 PASKQ96RG2 1323 aa5.68□□□□□ -1.5
HMGB1P46-201ENST00000520062 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP5.67□□□□□ -1.5
HMGB1P46-201ENST00000520062 PABPN1LA6NDY0 278 aaKnown RBP5.67□□□□□ -1.5
HMGB1P46-201ENST00000520062 TMEM191CA6NGB0 347 aa5.67□□□□□ -1.5
HMGB1P46-201ENST00000520062 TTC36A6NLP5 189 aa5.67□□□□□ -1.5
HMGB1P46-201ENST00000520062 TARM1B6A8C7 271 aa5.67□□□□□ -1.5
HMGB1P46-201ENST00000520062 TAF4O00268 1085 aa5.67□□□□□ -1.5
HMGB1P46-201ENST00000520062 RRHO14718 337 aa5.67□□□□□ -1.5
HMGB1P46-201ENST00000520062 VILLO15195 856 aa5.67□□□□□ -1.5
HMGB1P46-201ENST00000520062 GALTP07902 379 aa5.67□□□□□ -1.5
HMGB1P46-201ENST00000520062 FCGR2AP12318 317 aa5.67□□□□□ -1.5
HMGB1P46-201ENST00000520062 TACR3P29371 465 aa5.67□□□□□ -1.5
HMGB1P46-201ENST00000520062 MCM7P33993 719 aa5.67□□□□□ -1.5
HMGB1P46-201ENST00000520062 CPA2P48052 419 aa5.67□□□□□ -1.5
HMGB1P46-201ENST00000520062 CACNA2D1P54289 1103 aa5.67□□□□□ -1.5
HMGB1P46-201ENST00000520062 MC1RQ01726 317 aa5.67□□□□□ -1.5
HMGB1P46-201ENST00000520062 CYP4A11Q02928 519 aa5.67□□□□□ -1.5
HMGB1P46-201ENST00000520062 ABHD18Q0P651 414 aa5.67□□□□□ -1.5
HMGB1P46-201ENST00000520062 CHAF1BQ13112 559 aa5.67□□□□□ -1.5
HMGB1P46-201ENST00000520062 CERKLQ49MI3 558 aaPredicted RBP5.67□□□□□ -1.5
HMGB1P46-201ENST00000520062 FAM171A1Q5VUB5 890 aa5.67□□□□□ -1.5
HMGB1P46-201ENST00000520062 ATG9BQ674R7 924 aa5.67□□□□□ -1.5
HMGB1P46-201ENST00000520062 CYP20A1Q6UW02 462 aa5.67□□□□□ -1.5
HMGB1P46-201ENST00000520062 RBM44Q6ZP01 1051 aaKnown RBP5.67□□□□□ -1.5
HMGB1P46-201ENST00000520062 PRSS45Q7RTY3 260 aa5.67□□□□□ -1.5
HMGB1P46-201ENST00000520062 SLC46A3Q7Z3Q1 461 aa5.67□□□□□ -1.5
HMGB1P46-201ENST00000520062 SCFD2Q8WU76 684 aa5.67□□□□□ -1.5
HMGB1P46-201ENST00000520062 KAT2BQ92831 832 aa5.67□□□□□ -1.5
HMGB1P46-201ENST00000520062 ARHGEF2Q92974 986 aaKnown RBP5.67□□□□□ -1.5
HMGB1P46-201ENST00000520062 INTS12Q96CB8 462 aaKnown RBP5.67□□□□□ -1.5
HMGB1P46-201ENST00000520062 PERPQ96FX8 193 aa5.67□□□□□ -1.5
HMGB1P46-201ENST00000520062 FCRL5Q96RD9 977 aa5.67□□□□□ -1.5
HMGB1P46-201ENST00000520062 MAP7D2Q96T17 732 aa5.67□□□□□ -1.5
HMGB1P46-201ENST00000520062 PRRX2Q99811 253 aa5.67□□□□□ -1.5
HMGB1P46-201ENST00000520062 IFT27Q9BW83 186 aa5.67□□□□□ -1.5
HMGB1P46-201ENST00000520062 STRA6Q9BX79 667 aa5.67□□□□□ -1.5
HMGB1P46-201ENST00000520062 SLC32A1Q9H598 525 aa5.67□□□□□ -1.5
HMGB1P46-201ENST00000520062 ATP8A2Q9NTI2 1148 aa5.67□□□□□ -1.5
HMGB1P46-201ENST00000520062 C20orf141Q9NUB4 165 aa5.67□□□□□ -1.5
HMGB1P46-201ENST00000520062 GRHL1Q9NZI5 618 aa5.67□□□□□ -1.5
HMGB1P46-201ENST00000520062 NCKIPSDQ9NZQ3 722 aa5.67□□□□□ -1.5
HMGB1P46-201ENST00000520062 KIAA1456Q9P272 454 aa5.67□□□□□ -1.5
HMGB1P46-201ENST00000520062 ADD3Q9UEY8 706 aaKnown RBP5.67□□□□□ -1.5
HMGB1P46-201ENST00000520062 hCG_1807616A0A1W2PRN6 198 aa5.66□□□□□ -1.5
HMGB1P46-201ENST00000520062 ARHGAP10A1A4S6 786 aa5.66□□□□□ -1.5
HMGB1P46-201ENST00000520062 PTGES3LE9PB15 166 aa5.66□□□□□ -1.5
HMGB1P46-201ENST00000520062 BCAT2O15382 392 aaPredicted RBP5.66□□□□□ -1.5
HMGB1P46-201ENST00000520062 TACC1O75410 805 aa5.66□□□□□ -1.5
HMGB1P46-201ENST00000520062 EIF2S1P05198 315 aaKnown RBP5.66□□□□□ -1.5
HMGB1P46-201ENST00000520062 CSH1P0DML2 217 aa5.66□□□□□ -1.5
HMGB1P46-201ENST00000520062 CSH2P0DML3 217 aa5.66□□□□□ -1.5
HMGB1P46-201ENST00000520062 NLRP5P59047 1200 aa5.66□□□□□ -1.5
HMGB1P46-201ENST00000520062 GOLGA8DPQ0D2H9 430 aa5.66□□□□□ -1.5
HMGB1P46-201ENST00000520062 TMEM115Q12893 351 aaPredicted RBP5.66□□□□□ -1.5
HMGB1P46-201ENST00000520062 EPS8Q12929 822 aa5.66□□□□□ -1.5
HMGB1P46-201ENST00000520062 ARL13AQ5H913 290 aaPredicted RBP5.66□□□□□ -1.5
HMGB1P46-201ENST00000520062 ZKSCAN2Q63HK3 967 aa5.66□□□□□ -1.5
HMGB1P46-201ENST00000520062 SARM1Q6SZW1 724 aa5.66□□□□□ -1.5
HMGB1P46-201ENST00000520062 KRT74Q7RTS7 529 aa5.66□□□□□ -1.5
HMGB1P46-201ENST00000520062 SZRD1Q7Z422 152 aa5.66□□□□□ -1.5
HMGB1P46-201ENST00000520062 FAM160B2Q86V87 743 aa5.66□□□□□ -1.5
HMGB1P46-201ENST00000520062 DNAAF1Q8NEP3 725 aa5.66□□□□□ -1.5
HMGB1P46-201ENST00000520062 CADM4Q8NFZ8 388 aa5.66□□□□□ -1.5
HMGB1P46-201ENST00000520062 ZNF398Q8TD17 642 aa5.66□□□□□ -1.5
HMGB1P46-201ENST00000520062 HDAC7Q8WUI4 952 aa5.66□□□□□ -1.5
HMGB1P46-201ENST00000520062 POMGNT1Q8WZA1 660 aa5.66□□□□□ -1.5
HMGB1P46-201ENST00000520062 SMARCE1Q969G3 411 aa5.66□□□□□ -1.5
HMGB1P46-201ENST00000520062 FEM1CQ96JP0 617 aa5.66□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms