RNA–Protein interactions for RNA: ENST00000519141.5

SPIDR-209, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 2

Gene SPIDR, Length 1,699 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-209ENST00000519141 TTLL3Q9Y4R7 772 aa12.64□□□□□ -0.39
SPIDR-209ENST00000519141 J3KR12 359 aa12.63□□□□□ -0.39
SPIDR-209ENST00000519141 LEFTY2O00292 366 aa12.63□□□□□ -0.39
SPIDR-209ENST00000519141 ZNF197O14709 1029 aa12.63□□□□□ -0.39
SPIDR-209ENST00000519141 TBL1XO60907 577 aa12.63□□□□□ -0.39
SPIDR-209ENST00000519141 MOSPD3O75425 235 aa12.63□□□□□ -0.39
SPIDR-209ENST00000519141 AP2A1O95782 977 aa12.63□□□□□ -0.39
SPIDR-209ENST00000519141 HLA-DQB2P05538 268 aa12.63□□□□□ -0.39
SPIDR-209ENST00000519141 IVLP07476 585 aa12.63□□□□□ -0.39
SPIDR-209ENST00000519141 RHOCP08134 193 aa12.63□□□□□ -0.39
SPIDR-209ENST00000519141 MLNP12872 115 aa12.63□□□□□ -0.39
SPIDR-209ENST00000519141 TSHRP16473 764 aa12.63□□□□□ -0.39
SPIDR-209ENST00000519141 PHBP35232 272 aa12.63□□□□□ -0.39
SPIDR-209ENST00000519141 ACVRL1P37023 503 aa12.63□□□□□ -0.39
SPIDR-209ENST00000519141 ELK3P41970 407 aa12.63□□□□□ -0.39
SPIDR-209ENST00000519141 MAGEA3P43357 314 aa12.63□□□□□ -0.39
SPIDR-209ENST00000519141 RENBPP51606 427 aa12.63□□□□□ -0.39
SPIDR-209ENST00000519141 NTHL1P78549 312 aa12.63□□□□□ -0.39
SPIDR-209ENST00000519141 HNRNPDQ14103 355 aaKnown RBP12.63□□□□□ -0.39
SPIDR-209ENST00000519141 SLC5A9Q2M3M2 681 aa12.63□□□□□ -0.39
SPIDR-209ENST00000519141 ZNF534Q76KX8 674 aa12.63□□□□□ -0.39
SPIDR-209ENST00000519141 GRASPQ7Z6J2 395 aaPredicted RBP12.63□□□□□ -0.39
SPIDR-209ENST00000519141 SETD3Q86TU7 594 aaPredicted RBP12.63□□□□□ -0.39
SPIDR-209ENST00000519141 FAM217AQ8IXS0 508 aa12.63□□□□□ -0.39
SPIDR-209ENST00000519141 ARHGEF2Q92974 986 aaKnown RBP12.63□□□□□ -0.39
SPIDR-209ENST00000519141 ZNF707Q96C28 371 aaPredicted RBP12.63□□□□□ -0.39
SPIDR-209ENST00000519141 LRRC39Q96DD0 335 aa12.63□□□□□ -0.39
SPIDR-209ENST00000519141 PABPC5Q96DU9 382 aaKnown RBP12.63□□□□□ -0.39
SPIDR-209ENST00000519141 CCDC77Q9BR77 488 aa12.63□□□□□ -0.39
SPIDR-209ENST00000519141 TMEM109Q9BVC6 243 aa12.63□□□□□ -0.39
SPIDR-209ENST00000519141 PIDD1Q9HB75 910 aa12.63□□□□□ -0.39
SPIDR-209ENST00000519141 GLOD4Q9HC38 313 aa12.63□□□□□ -0.39
SPIDR-209ENST00000519141 LRRC4CQ9HCJ2 640 aa12.63□□□□□ -0.39
SPIDR-209ENST00000519141 RBM22Q9NW64 420 aaKnown RBP eCLIP12.63□□□□□ -0.39
SPIDR-209ENST00000519141 ILVBLA1L0T0 632 aa12.62□□□□□ -0.39
SPIDR-209ENST00000519141 PSMD3O43242 534 aa12.62□□□□□ -0.39
SPIDR-209ENST00000519141 PRAMEF11O60813 436 aa12.62□□□□□ -0.39
SPIDR-209ENST00000519141 AVILO75366 819 aa12.62□□□□□ -0.39
SPIDR-209ENST00000519141 ANXA9O76027 345 aa12.62□□□□□ -0.39
SPIDR-209ENST00000519141 PEX11BO96011 259 aa12.62□□□□□ -0.39
SPIDR-209ENST00000519141 CPP00450 1065 aa12.62□□□□□ -0.39
SPIDR-209ENST00000519141 ETFBP38117 255 aa12.62□□□□□ -0.39
SPIDR-209ENST00000519141 STAT4Q14765 748 aa12.62□□□□□ -0.39
SPIDR-209ENST00000519141 TTMPQ5BVD1 217 aa12.62□□□□□ -0.39
SPIDR-209ENST00000519141 PRSS36Q5K4E3 855 aa12.62□□□□□ -0.39
SPIDR-209ENST00000519141 TMCO4Q5TGY1 634 aa12.62□□□□□ -0.39
SPIDR-209ENST00000519141 MARC1Q5VT66 337 aa12.62□□□□□ -0.39
SPIDR-209ENST00000519141 LRRC8BQ6P9F7 803 aa12.62□□□□□ -0.39
SPIDR-209ENST00000519141 CAPN12Q6ZSI9 719 aa12.62□□□□□ -0.39
SPIDR-209ENST00000519141 OTOP3Q7RTS5 596 aa12.62□□□□□ -0.39
SPIDR-209ENST00000519141 PHF6Q8IWS0 365 aaKnown RBP eCLIP12.62□□□□□ -0.39
SPIDR-209ENST00000519141 PALM2Q8IXS6 379 aa12.62□□□□□ -0.39
SPIDR-209ENST00000519141 CPXM2Q8N436 756 aa12.62□□□□□ -0.39
SPIDR-209ENST00000519141 OR7D4Q8NG98 312 aa12.62□□□□□ -0.39
SPIDR-209ENST00000519141 SH3RF2Q8TEC5 729 aa12.62□□□□□ -0.39
SPIDR-209ENST00000519141 SMG7Q92540 1137 aaKnown RBP12.62□□□□□ -0.39
SPIDR-209ENST00000519141 PPP2R3CQ969Q6 453 aa12.62□□□□□ -0.39
SPIDR-209ENST00000519141 ARL8AQ96BM9 186 aa12.62□□□□□ -0.39
SPIDR-209ENST00000519141 TMA16Q96EY4 203 aaKnown RBP12.62□□□□□ -0.39
SPIDR-209ENST00000519141 ZNF419Q96HQ0 510 aaPredicted RBP12.62□□□□□ -0.39
SPIDR-209ENST00000519141 FCRL5Q96RD9 977 aa12.62□□□□□ -0.39
SPIDR-209ENST00000519141 GORASP1Q9BQQ3 440 aa12.62□□□□□ -0.39
SPIDR-209ENST00000519141 WDR83Q9BRX9 315 aaKnown RBP12.62□□□□□ -0.39
SPIDR-209ENST00000519141 MLPHQ9BV36 600 aaPredicted RBP12.62□□□□□ -0.39
SPIDR-209ENST00000519141 ROPN1BQ9BZX4 212 aaPredicted RBP12.62□□□□□ -0.39
SPIDR-209ENST00000519141 SMG9Q9H0W8 520 aaKnown RBP12.62□□□□□ -0.39
SPIDR-209ENST00000519141 LRRC40Q9H9A6 602 aa12.62□□□□□ -0.39
SPIDR-209ENST00000519141 SFXN1Q9H9B4 322 aa12.62□□□□□ -0.39
SPIDR-209ENST00000519141 ROPN1Q9HAT0 212 aaPredicted RBP12.62□□□□□ -0.39
SPIDR-209ENST00000519141 TMBIM4Q9HC24 238 aa12.62□□□□□ -0.39
SPIDR-209ENST00000519141 TBC1D30Q9Y2I9 924 aa12.62□□□□□ -0.39
SPIDR-209ENST00000519141 TEX264Q9Y6I9 313 aa12.62□□□□□ -0.39
SPIDR-209ENST00000519141 NUP210Q8TEM1 1887 aaPredicted RBP12.61□□□□□ -0.39
SPIDR-209ENST00000519141 E2F8A0AVK6 867 aa12.61□□□□□ -0.39
SPIDR-209ENST00000519141 EPOPA6NHQ4 379 aa12.61□□□□□ -0.39
SPIDR-209ENST00000519141 SMIM23A6NLE4 172 aa12.61□□□□□ -0.39
SPIDR-209ENST00000519141 H0Y626 953 aa12.61□□□□□ -0.39
SPIDR-209ENST00000519141 GFRA2O00451 464 aa12.61□□□□□ -0.39
SPIDR-209ENST00000519141 RASGRF2O14827 1237 aa12.61□□□□□ -0.39
SPIDR-209ENST00000519141 CACNG3O60359 315 aa12.61□□□□□ -0.39
SPIDR-209ENST00000519141 SPAG6O75602 509 aa12.61□□□□□ -0.39
SPIDR-209ENST00000519141 SUN1O94901 812 aa12.61□□□□□ -0.39
SPIDR-209ENST00000519141 HOXD9P28356 352 aaPredicted RBP12.61□□□□□ -0.39
SPIDR-209ENST00000519141 GRIA1P42261 906 aa12.61□□□□□ -0.39
SPIDR-209ENST00000519141 MMP13P45452 471 aa12.61□□□□□ -0.39
SPIDR-209ENST00000519141 IFNAR2P48551 515 aa12.61□□□□□ -0.39
SPIDR-209ENST00000519141 OXCT1P55809 520 aa12.61□□□□□ -0.39
SPIDR-209ENST00000519141 IL31Q6EBC2 164 aa12.61□□□□□ -0.39
SPIDR-209ENST00000519141 ZNF783Q6ZMS7 281 aa12.61□□□□□ -0.39
SPIDR-209ENST00000519141 BBS7Q8IWZ6 715 aa12.61□□□□□ -0.39
SPIDR-209ENST00000519141 CARNMT1Q8N4J0 409 aa12.61□□□□□ -0.39
SPIDR-209ENST00000519141 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP12.61□□□□□ -0.39
SPIDR-209ENST00000519141 TDRD5Q8NAT2 981 aaKnown RBP12.61□□□□□ -0.39
SPIDR-209ENST00000519141 EPS8L3Q8TE67 593 aaKnown RBP12.61□□□□□ -0.39
SPIDR-209ENST00000519141 ATP6V1G3Q96LB4 118 aa12.61□□□□□ -0.39
SPIDR-209ENST00000519141 ZNF599Q96NL3 588 aa12.61□□□□□ -0.39
SPIDR-209ENST00000519141 CDCA3Q99618 268 aaPredicted RBP12.61□□□□□ -0.39
SPIDR-209ENST00000519141 SPON2Q9BUD6 331 aa12.61□□□□□ -0.39
SPIDR-209ENST00000519141 NT5MQ9NPB1 228 aa12.61□□□□□ -0.39
SPIDR-209ENST00000519141 TDP1Q9NUW8 608 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms