RNA–Protein interactions for RNA: ENST00000518839.1

TRAPPC9-205, Transcript of trafficking protein particle complex 9, humanhuman

TSL 4

Gene TRAPPC9, Length 547 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-205ENST00000518839 LEFTY2O00292 366 aa15.35■□□□□ 0.05
TRAPPC9-205ENST00000518839 GFRA2O00451 464 aa15.35■□□□□ 0.05
TRAPPC9-205ENST00000518839 CDH16O75309 829 aa15.35■□□□□ 0.05
TRAPPC9-205ENST00000518839 PEX11BO96011 259 aa15.35■□□□□ 0.05
TRAPPC9-205ENST00000518839 AGTP01019 485 aa15.35■□□□□ 0.05
TRAPPC9-205ENST00000518839 HLA-DQB2P05538 268 aa15.35■□□□□ 0.05
TRAPPC9-205ENST00000518839 TCF3P15923 654 aa15.35■□□□□ 0.05
TRAPPC9-205ENST00000518839 STX2P32856 288 aa15.35■□□□□ 0.05
TRAPPC9-205ENST00000518839 PBX2P40425 430 aa15.35■□□□□ 0.05
TRAPPC9-205ENST00000518839 MPP3Q13368 585 aa15.35■□□□□ 0.05
TRAPPC9-205ENST00000518839 RFTN1Q14699 578 aaPredicted RBP15.35■□□□□ 0.05
TRAPPC9-205ENST00000518839 RASA2Q15283 850 aa15.35■□□□□ 0.05
TRAPPC9-205ENST00000518839 TEAD2Q15562 447 aa15.35■□□□□ 0.05
TRAPPC9-205ENST00000518839 MPPE1Q53F39 396 aa15.35■□□□□ 0.05
TRAPPC9-205ENST00000518839 PRSS36Q5K4E3 855 aa15.35■□□□□ 0.05
TRAPPC9-205ENST00000518839 SYCP2LQ5T4T6 812 aa15.35■□□□□ 0.05
TRAPPC9-205ENST00000518839 ARMC3Q5W041 872 aa15.35■□□□□ 0.05
TRAPPC9-205ENST00000518839 C3orf62Q6ZUJ4 267 aa15.35■□□□□ 0.05
TRAPPC9-205ENST00000518839 TDRPQ86YL5 185 aa15.35■□□□□ 0.05
TRAPPC9-205ENST00000518839 CNPY4Q8N129 248 aa15.35■□□□□ 0.05
TRAPPC9-205ENST00000518839 ARFGAP2Q8N6H7 521 aa15.35■□□□□ 0.05
TRAPPC9-205ENST00000518839 PABPC5Q96DU9 382 aaKnown RBP15.35■□□□□ 0.05
TRAPPC9-205ENST00000518839 SIGLEC10Q96LC7 697 aa15.35■□□□□ 0.05
TRAPPC9-205ENST00000518839 EBNA1BP2Q99848 306 aaKnown RBP15.35■□□□□ 0.05
TRAPPC9-205ENST00000518839 SLC25A51Q9H1U9 297 aa15.35■□□□□ 0.05
TRAPPC9-205ENST00000518839 PIDD1Q9HB75 910 aa15.35■□□□□ 0.05
TRAPPC9-205ENST00000518839 VPS45Q9NRW7 570 aa15.35■□□□□ 0.05
TRAPPC9-205ENST00000518839 BFARQ9NZS9 450 aa15.35■□□□□ 0.05
TRAPPC9-205ENST00000518839 ZC3H7BQ9UGR2 993 aaKnown RBP15.35■□□□□ 0.05
TRAPPC9-205ENST00000518839 SLC24A2Q9UI40 661 aa15.35■□□□□ 0.05
TRAPPC9-205ENST00000518839 CCDC195A0A1B0GUA6 201 aa15.34■□□□□ 0.05
TRAPPC9-205ENST00000518839 H0Y626 953 aa15.34■□□□□ 0.05
TRAPPC9-205ENST00000518839 J3KR12 359 aa15.34■□□□□ 0.05
TRAPPC9-205ENST00000518839 TRDMT1O14717 391 aaKnown RBP15.34■□□□□ 0.05
TRAPPC9-205ENST00000518839 PER2O15055 1255 aa15.34■□□□□ 0.05
TRAPPC9-205ENST00000518839 POLR3GO15318 223 aaPredicted RBP15.34■□□□□ 0.05
TRAPPC9-205ENST00000518839 KDELR3O43731 214 aa15.34■□□□□ 0.05
TRAPPC9-205ENST00000518839 TSPAN3O60637 253 aa15.34■□□□□ 0.05
TRAPPC9-205ENST00000518839 TBL1XO60907 577 aa15.34■□□□□ 0.05
TRAPPC9-205ENST00000518839 MOSPD3O75425 235 aa15.34■□□□□ 0.05
TRAPPC9-205ENST00000518839 BANF1O75531 89 aa15.34■□□□□ 0.05
TRAPPC9-205ENST00000518839 LUC7L3O95232 432 aaKnown RBP15.34■□□□□ 0.05
TRAPPC9-205ENST00000518839 CYBBP04839 570 aa15.34■□□□□ 0.05
TRAPPC9-205ENST00000518839 GJA1P17302 382 aa15.34■□□□□ 0.05
TRAPPC9-205ENST00000518839 CCR2P41597 374 aa15.34■□□□□ 0.05
TRAPPC9-205ENST00000518839 NPY2RP49146 381 aa15.34■□□□□ 0.05
TRAPPC9-205ENST00000518839 GPX6P59796 221 aa15.34■□□□□ 0.05
TRAPPC9-205ENST00000518839 CBX1P83916 185 aa15.34■□□□□ 0.05
TRAPPC9-205ENST00000518839 LBRQ14739 615 aaKnown RBP15.34■□□□□ 0.05
TRAPPC9-205ENST00000518839 HP1BP3Q5SSJ5 553 aaPredicted RBP15.34■□□□□ 0.05
TRAPPC9-205ENST00000518839 IL31Q6EBC2 164 aa15.34■□□□□ 0.05
TRAPPC9-205ENST00000518839 KIAA1958Q8N8K9 716 aa15.34■□□□□ 0.05
TRAPPC9-205ENST00000518839 ZNF557Q8N988 423 aaPredicted RBP15.34■□□□□ 0.05
TRAPPC9-205ENST00000518839 TDRD5Q8NAT2 981 aaKnown RBP15.34■□□□□ 0.05
TRAPPC9-205ENST00000518839 EPS8L3Q8TE67 593 aaKnown RBP15.34■□□□□ 0.05
TRAPPC9-205ENST00000518839 ARNTL2Q8WYA1 636 aa15.34■□□□□ 0.05
TRAPPC9-205ENST00000518839 STAMBPL1Q96FJ0 436 aa15.34■□□□□ 0.05
TRAPPC9-205ENST00000518839 GORASP1Q9BQQ3 440 aa15.34■□□□□ 0.05
TRAPPC9-205ENST00000518839 MLPHQ9BV36 600 aaPredicted RBP15.34■□□□□ 0.05
TRAPPC9-205ENST00000518839 ACSS3Q9H6R3 686 aa15.34■□□□□ 0.05
TRAPPC9-205ENST00000518839 SFXN1Q9H9B4 322 aa15.34■□□□□ 0.05
TRAPPC9-205ENST00000518839 CASS4Q9NQ75 786 aa15.34■□□□□ 0.05
TRAPPC9-205ENST00000518839 BCCIPQ9P287 314 aaKnown RBP eCLIP15.34■□□□□ 0.05
TRAPPC9-205ENST00000518839 LGALS13Q9UHV8 139 aa15.34■□□□□ 0.05
TRAPPC9-205ENST00000518839 DOCK6Q96HP0 2047 aa15.34■□□□□ 0.05
TRAPPC9-205ENST00000518839 MAGEB16A2A368 324 aa15.33■□□□□ 0.04
TRAPPC9-205ENST00000518839 F5H423 210 aaPredicted RBP15.33■□□□□ 0.04
TRAPPC9-205ENST00000518839 AVILO75366 819 aa15.33■□□□□ 0.04
TRAPPC9-205ENST00000518839 SSTR1P30872 391 aa15.33■□□□□ 0.04
TRAPPC9-205ENST00000518839 BMP8BP34820 402 aa15.33■□□□□ 0.04
TRAPPC9-205ENST00000518839 ACVRL1P37023 503 aa15.33■□□□□ 0.04
TRAPPC9-205ENST00000518839 ZXDBP98169 803 aa15.33■□□□□ 0.04
TRAPPC9-205ENST00000518839 CDH17Q12864 832 aa15.33■□□□□ 0.04
TRAPPC9-205ENST00000518839 NR1H3Q13133 447 aa15.33■□□□□ 0.04
TRAPPC9-205ENST00000518839 ZNF235Q14590 738 aa15.33■□□□□ 0.04
TRAPPC9-205ENST00000518839 SLC14A2Q15849 920 aa15.33■□□□□ 0.04
TRAPPC9-205ENST00000518839 LONRF1Q17RB8 773 aa15.33■□□□□ 0.04
TRAPPC9-205ENST00000518839 STXBP5Q5T5C0 1151 aa15.33■□□□□ 0.04
TRAPPC9-205ENST00000518839 UBAP2Q5T6F2 1119 aaKnown RBP15.33■□□□□ 0.04
TRAPPC9-205ENST00000518839 CYS1Q717R9 158 aa15.33■□□□□ 0.04
TRAPPC9-205ENST00000518839 GRASPQ7Z6J2 395 aaPredicted RBP15.33■□□□□ 0.04
TRAPPC9-205ENST00000518839 ADGRD2Q7Z7M1 963 aa15.33■□□□□ 0.04
TRAPPC9-205ENST00000518839 RBM23Q86U06 439 aaKnown RBP15.33■□□□□ 0.04
TRAPPC9-205ENST00000518839 DNAAF3Q8N9W5 541 aa15.33■□□□□ 0.04
TRAPPC9-205ENST00000518839 SH3RF2Q8TEC5 729 aa15.33■□□□□ 0.04
TRAPPC9-205ENST00000518839 SMG7Q92540 1137 aaKnown RBP15.33■□□□□ 0.04
TRAPPC9-205ENST00000518839 ZNF707Q96C28 371 aaPredicted RBP15.33■□□□□ 0.04
TRAPPC9-205ENST00000518839 TLCD1Q96CP7 247 aa15.33■□□□□ 0.04
TRAPPC9-205ENST00000518839 TCEAL4Q96EI5 215 aa15.33■□□□□ 0.04
TRAPPC9-205ENST00000518839 CYTH2Q99418 400 aa15.33■□□□□ 0.04
TRAPPC9-205ENST00000518839 WDR83Q9BRX9 315 aaKnown RBP15.33■□□□□ 0.04
TRAPPC9-205ENST00000518839 ACE2Q9BYF1 805 aaPredicted RBP15.33■□□□□ 0.04
TRAPPC9-205ENST00000518839 CERS4Q9HA82 394 aa15.33■□□□□ 0.04
TRAPPC9-205ENST00000518839 KIF9Q9HAQ2 790 aa15.33■□□□□ 0.04
TRAPPC9-205ENST00000518839 PDFQ9HBH1 243 aa15.33■□□□□ 0.04
TRAPPC9-205ENST00000518839 ATP13A1Q9HD20 1204 aa15.33■□□□□ 0.04
TRAPPC9-205ENST00000518839 NT5MQ9NPB1 228 aa15.33■□□□□ 0.04
TRAPPC9-205ENST00000518839 SAMD15Q9P1V8 674 aa15.33■□□□□ 0.04
TRAPPC9-205ENST00000518839 TBC1D14Q9P2M4 693 aa15.33■□□□□ 0.04
TRAPPC9-205ENST00000518839 UBA2Q9UBT2 640 aaPredicted RBP15.33■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms