RNA–Protein interactions for RNA: ENST00000518538.5

VEGFA-217, Transcript of vascular endothelial growth factor A, humanhuman

TSL 2

Gene VEGFA, Length 535 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-217ENST00000518538 REXO2Q9Y3B8 237 aaKnown RBP22.46■■□□□ 1.19
VEGFA-217ENST00000518538 ZSCAN5CA6NGD5 496 aaPredicted RBP22.45■■□□□ 1.18
VEGFA-217ENST00000518538 MAP3K13O43283 966 aa22.45■■□□□ 1.18
VEGFA-217ENST00000518538 SMAD6O43541 496 aaKnown RBP22.45■■□□□ 1.18
VEGFA-217ENST00000518538 CD160O95971 181 aa22.45■■□□□ 1.18
VEGFA-217ENST00000518538 DNTTP04053 509 aa22.45■■□□□ 1.18
VEGFA-217ENST00000518538 SLC1A1P43005 524 aa22.45■■□□□ 1.18
VEGFA-217ENST00000518538 NOP2P46087 812 aaKnown RBP22.45■■□□□ 1.18
VEGFA-217ENST00000518538 ARSEP51690 589 aa22.45■■□□□ 1.18
VEGFA-217ENST00000518538 CDH6P55285 790 aa22.45■■□□□ 1.18
VEGFA-217ENST00000518538 SERINC3Q13530 473 aa22.45■■□□□ 1.18
VEGFA-217ENST00000518538 C22orf39Q6P5X5 142 aa22.45■■□□□ 1.18
VEGFA-217ENST00000518538 ALYREFQ86V81 257 aaKnown RBP22.45■■□□□ 1.18
VEGFA-217ENST00000518538 ZNF354CQ86Y25 554 aa22.45■■□□□ 1.18
VEGFA-217ENST00000518538 OR8D1Q8WZ84 308 aa22.45■■□□□ 1.18
VEGFA-217ENST00000518538 TSC1Q92574 1164 aa22.45■■□□□ 1.18
VEGFA-217ENST00000518538 NCDNQ9UBB6 729 aa22.45■■□□□ 1.18
VEGFA-217ENST00000518538 TFR2Q9UP52 801 aa22.45■■□□□ 1.18
VEGFA-217ENST00000518538 GOLGA6L3A6NEY3 463 aa22.44■■□□□ 1.18
VEGFA-217ENST00000518538 ALOX15BO15296 676 aa22.44■■□□□ 1.18
VEGFA-217ENST00000518538 CD6P30203 668 aa22.44■■□□□ 1.18
VEGFA-217ENST00000518538 OXTRP30559 389 aa22.44■■□□□ 1.18
VEGFA-217ENST00000518538 PDK2Q15119 407 aa22.44■■□□□ 1.18
VEGFA-217ENST00000518538 CST6Q15828 149 aa22.44■■□□□ 1.18
VEGFA-217ENST00000518538 TTC31Q49AM3 519 aaPredicted RBP22.44■■□□□ 1.18
VEGFA-217ENST00000518538 ATP13A4Q4VNC1 1196 aa22.44■■□□□ 1.18
VEGFA-217ENST00000518538 AFMIDQ63HM1 303 aa22.44■■□□□ 1.18
VEGFA-217ENST00000518538 LPCAT2Q7L5N7 544 aa22.44■■□□□ 1.18
VEGFA-217ENST00000518538 DSG4Q86SJ6 1040 aa22.44■■□□□ 1.18
VEGFA-217ENST00000518538 MMAAQ8IVH4 418 aaKnown RBP22.44■■□□□ 1.18
VEGFA-217ENST00000518538 LZTR1Q8N653 840 aa22.44■■□□□ 1.18
VEGFA-217ENST00000518538 NPWQ8N729 165 aa22.44■■□□□ 1.18
VEGFA-217ENST00000518538 ACRBPQ8NEB7 543 aa22.44■■□□□ 1.18
VEGFA-217ENST00000518538 RUBCNQ92622 972 aa22.44■■□□□ 1.18
VEGFA-217ENST00000518538 CELF6Q96J87 481 aaKnown RBP22.44■■□□□ 1.18
VEGFA-217ENST00000518538 CCDC114Q96M63 670 aa22.44■■□□□ 1.18
VEGFA-217ENST00000518538 PABPC3Q9H361 631 aaKnown RBP22.44■■□□□ 1.18
VEGFA-217ENST00000518538 FARP1Q9Y4F1 1045 aaPredicted RBP22.44■■□□□ 1.18
VEGFA-217ENST00000518538 VPS13AQ96RL7 3174 aa22.44■■□□□ 1.18
VEGFA-217ENST00000518538 NYNRINQ9P2P1 1898 aaKnown RBP22.43■■□□□ 1.18
VEGFA-217ENST00000518538 RCCD1A6NED2 376 aa22.43■■□□□ 1.18
VEGFA-217ENST00000518538 ARHGAP42A6NI28 874 aa22.43■■□□□ 1.18
VEGFA-217ENST00000518538 MCF2LO15068 1137 aa22.43■■□□□ 1.18
VEGFA-217ENST00000518538 RETP07949 1114 aa22.43■■□□□ 1.18
VEGFA-217ENST00000518538 AMPD1P23109 780 aa22.43■■□□□ 1.18
VEGFA-217ENST00000518538 VAV2P52735 878 aa22.43■■□□□ 1.18
VEGFA-217ENST00000518538 SPDYCQ5MJ68 293 aa22.43■■□□□ 1.18
VEGFA-217ENST00000518538 MAP7D3Q8IWC1 876 aa22.43■■□□□ 1.18
VEGFA-217ENST00000518538 ARHGAP12Q8IWW6 846 aa22.43■■□□□ 1.18
VEGFA-217ENST00000518538 PCDH20Q8N6Y1 951 aaKnown RBP22.43■■□□□ 1.18
VEGFA-217ENST00000518538 KCTD6Q8NC69 237 aa22.43■■□□□ 1.18
VEGFA-217ENST00000518538 OR2A12Q8NGT7 310 aa22.43■■□□□ 1.18
VEGFA-217ENST00000518538 ISG20Q96AZ6 181 aaKnown RBP22.43■■□□□ 1.18
VEGFA-217ENST00000518538 SLC39A8Q9C0K1 460 aa22.43■■□□□ 1.18
VEGFA-217ENST00000518538 WSB2Q9NYS7 404 aaPredicted RBP22.43■■□□□ 1.18
VEGFA-217ENST00000518538 FCF1Q9Y324 198 aaKnown RBP22.43■■□□□ 1.18
VEGFA-217ENST00000518538 ACTL7AQ9Y615 435 aa22.43■■□□□ 1.18
VEGFA-217ENST00000518538 BTNL10A8MVZ5 291 aa22.42■■□□□ 1.18
VEGFA-217ENST00000518538 BUB1O43683 1085 aa22.42■■□□□ 1.18
VEGFA-217ENST00000518538 BNIP3LO60238 219 aa22.42■■□□□ 1.18
VEGFA-217ENST00000518538 BUB1BO60566 1050 aaPredicted RBP22.42■■□□□ 1.18
VEGFA-217ENST00000518538 EPN2O95208 641 aa22.42■■□□□ 1.18
VEGFA-217ENST00000518538 ADH1BP00325 375 aa22.42■■□□□ 1.18
VEGFA-217ENST00000518538 CD48P09326 243 aa22.42■■□□□ 1.18
VEGFA-217ENST00000518538 IL4RP24394 825 aa22.42■■□□□ 1.18
VEGFA-217ENST00000518538 PSMD8P48556 350 aa22.42■■□□□ 1.18
VEGFA-217ENST00000518538 RPL6Q02878 288 aaKnown RBP22.42■■□□□ 1.18
VEGFA-217ENST00000518538 SFSWAPQ12872 951 aaKnown RBP22.42■■□□□ 1.18
VEGFA-217ENST00000518538 DPYSL3Q14195 570 aa22.42■■□□□ 1.18
VEGFA-217ENST00000518538 LRRC38Q5VT99 294 aa22.42■■□□□ 1.18
VEGFA-217ENST00000518538 TMCO3Q6UWJ1 677 aa22.42■■□□□ 1.18
VEGFA-217ENST00000518538 USP30Q70CQ3 517 aa22.42■■□□□ 1.18
VEGFA-217ENST00000518538 CASKIN2Q8WXE0 1202 aa22.42■■□□□ 1.18
VEGFA-217ENST00000518538 TOE1Q96GM8 510 aaKnown RBP22.42■■□□□ 1.18
VEGFA-217ENST00000518538 CALR3Q96L12 384 aaKnown RBP22.42■■□□□ 1.18
VEGFA-217ENST00000518538 ZNF670Q9BS34 389 aa22.42■■□□□ 1.18
VEGFA-217ENST00000518538 TNKS2Q9H2K2 1166 aa22.42■■□□□ 1.18
VEGFA-217ENST00000518538 KLHL11Q9NVR0 708 aa22.42■■□□□ 1.18
VEGFA-217ENST00000518538 MYO15AQ9UKN7 3530 aa22.42■■□□□ 1.18
VEGFA-217ENST00000518538 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa22.41■■□□□ 1.18
VEGFA-217ENST00000518538 MID1O15344 667 aa22.41■■□□□ 1.18
VEGFA-217ENST00000518538 NDUFS2O75306 463 aa22.41■■□□□ 1.18
VEGFA-217ENST00000518538 ZNF821O75541 412 aaPredicted RBP22.41■■□□□ 1.18
VEGFA-217ENST00000518538 IL1BP01584 269 aa22.41■■□□□ 1.18
VEGFA-217ENST00000518538 C5AR1P21730 350 aa22.41■■□□□ 1.18
VEGFA-217ENST00000518538 COMTP21964 271 aa22.41■■□□□ 1.18
VEGFA-217ENST00000518538 SLC8A1P32418 973 aa22.41■■□□□ 1.18
VEGFA-217ENST00000518538 RECQLP46063 649 aaPredicted RBP22.41■■□□□ 1.18
VEGFA-217ENST00000518538 PAPOLAP51003 745 aaKnown RBP22.41■■□□□ 1.18
VEGFA-217ENST00000518538 MMRN1Q13201 1228 aa22.41■■□□□ 1.18
VEGFA-217ENST00000518538 ZFYVE27Q5T4F4 411 aa22.41■■□□□ 1.18
VEGFA-217ENST00000518538 TMEFF1Q8IYR6 380 aa22.41■■□□□ 1.18
VEGFA-217ENST00000518538 HINFPQ9BQA5 517 aa22.41■■□□□ 1.18
VEGFA-217ENST00000518538 CALN1Q9BXU9 219 aa22.41■■□□□ 1.18
VEGFA-217ENST00000518538 ETNK2Q9NVF9 386 aa22.41■■□□□ 1.18
VEGFA-217ENST00000518538 PPM1HQ9ULR3 514 aa22.41■■□□□ 1.18
VEGFA-217ENST00000518538 NCKAP1Q9Y2A7 1128 aa22.41■■□□□ 1.18
VEGFA-217ENST00000518538 MFHAS1Q9Y4C4 1052 aa22.41■■□□□ 1.18
VEGFA-217ENST00000518538 PCDHGA5Q9Y5G8 931 aa22.41■■□□□ 1.18
VEGFA-217ENST00000518538 C1QTNF3-AMACRE9PGA6 284 aa22.4■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms