RNA–Protein interactions for RNA: ENST00000518250.5

BRD9-215, Transcript of bromodomain containing 9, humanhuman

TSL 3

Gene BRD9, Length 689 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRD9-215ENST00000518250 CALR3Q96L12 384 aaKnown RBP14.66□□□□□ -0.06
BRD9-215ENST00000518250 MRGPRX1Q96LB2 322 aa14.66□□□□□ -0.06
BRD9-215ENST00000518250 SLC39A8Q9C0K1 460 aa14.66□□□□□ -0.06
BRD9-215ENST00000518250 MKRN2Q9H000 416 aaKnown RBP14.66□□□□□ -0.06
BRD9-215ENST00000518250 KLC2Q9H0B6 622 aa14.66□□□□□ -0.06
BRD9-215ENST00000518250 LRRC19Q9H756 370 aa14.66□□□□□ -0.06
BRD9-215ENST00000518250 ETNK2Q9NVF9 386 aa14.66□□□□□ -0.06
BRD9-215ENST00000518250 RCOR3Q9P2K3 495 aaPredicted RBP14.66□□□□□ -0.06
BRD9-215ENST00000518250 HS3ST2Q9Y278 367 aa14.66□□□□□ -0.06
BRD9-215ENST00000518250 TARSL2A2RTX5 802 aaKnown RBP14.65□□□□□ -0.06
BRD9-215ENST00000518250 DCLK1O15075 740 aa14.65□□□□□ -0.06
BRD9-215ENST00000518250 HRO43593 1189 aa14.65□□□□□ -0.06
BRD9-215ENST00000518250 LILRB5O75023 590 aa14.65□□□□□ -0.06
BRD9-215ENST00000518250 RPP40O75818 363 aaKnown RBP14.65□□□□□ -0.06
BRD9-215ENST00000518250 NBL1P41271 181 aa14.65□□□□□ -0.06
BRD9-215ENST00000518250 SERPINH1P50454 418 aaKnown RBP14.65□□□□□ -0.06
BRD9-215ENST00000518250 VASPP50552 380 aaPredicted RBP14.65□□□□□ -0.06
BRD9-215ENST00000518250 PAPOLAP51003 745 aaKnown RBP14.65□□□□□ -0.06
BRD9-215ENST00000518250 DNA2P51530 1060 aa14.65□□□□□ -0.06
BRD9-215ENST00000518250 SLC20A2Q08357 652 aa14.65□□□□□ -0.06
BRD9-215ENST00000518250 SERINC3Q13530 473 aa14.65□□□□□ -0.06
BRD9-215ENST00000518250 IFI16Q16666 785 aaKnown RBP14.65□□□□□ -0.06
BRD9-215ENST00000518250 ANKRD20A8PQ5CZ79 823 aa14.65□□□□□ -0.06
BRD9-215ENST00000518250 C9orf64Q5T6V5 341 aa14.65□□□□□ -0.06
BRD9-215ENST00000518250 LRRC38Q5VT99 294 aa14.65□□□□□ -0.06
BRD9-215ENST00000518250 Q6ZVU0 165 aa14.65□□□□□ -0.06
BRD9-215ENST00000518250 STK40Q8N2I9 435 aa14.65□□□□□ -0.06
BRD9-215ENST00000518250 FRS2Q8WU20 508 aa14.65□□□□□ -0.06
BRD9-215ENST00000518250 GAB3Q8WWW8 586 aa14.65□□□□□ -0.06
BRD9-215ENST00000518250 SIPA1Q96FS4 1042 aa14.65□□□□□ -0.06
BRD9-215ENST00000518250 ZNF670Q9BS34 389 aa14.65□□□□□ -0.06
BRD9-215ENST00000518250 FBRSQ9HAH7 460 aa14.65□□□□□ -0.06
BRD9-215ENST00000518250 DDX56Q9NY93 547 aaKnown RBP14.65□□□□□ -0.06
BRD9-215ENST00000518250 FCF1Q9Y324 198 aaKnown RBP14.65□□□□□ -0.06
BRD9-215ENST00000518250 ARIH1Q9Y4X5 557 aaPredicted RBP14.65□□□□□ -0.06
BRD9-215ENST00000518250 NUMA1Q14980 2115 aa14.65□□□□□ -0.06
BRD9-215ENST00000518250 RALGAPA1Q6GYQ0 2036 aa14.65□□□□□ -0.06
BRD9-215ENST00000518250 GRID2IPA4D2P6 1211 aa14.64□□□□□ -0.07
BRD9-215ENST00000518250 PSTPIP1O43586 416 aa14.64□□□□□ -0.07
BRD9-215ENST00000518250 RNASEH1O60930 286 aaKnown RBP14.64□□□□□ -0.07
BRD9-215ENST00000518250 CCDC175P0C221 793 aa14.64□□□□□ -0.07
BRD9-215ENST00000518250 ACADMP11310 421 aa14.64□□□□□ -0.07
BRD9-215ENST00000518250 CNR2P34972 360 aa14.64□□□□□ -0.07
BRD9-215ENST00000518250 SERPINB6P35237 376 aa14.64□□□□□ -0.07
BRD9-215ENST00000518250 CLCN6P51797 869 aa14.64□□□□□ -0.07
BRD9-215ENST00000518250 GEMIN4P57678 1058 aaKnown RBP14.64□□□□□ -0.07
BRD9-215ENST00000518250 RPS14P62263 151 aaKnown RBP14.64□□□□□ -0.07
BRD9-215ENST00000518250 SIM2Q14190 667 aaPredicted RBP14.64□□□□□ -0.07
BRD9-215ENST00000518250 AFMIDQ63HM1 303 aa14.64□□□□□ -0.07
BRD9-215ENST00000518250 ZNF776Q68DI1 518 aaPredicted RBP14.64□□□□□ -0.07
BRD9-215ENST00000518250 C22orf39Q6P5X5 142 aa14.64□□□□□ -0.07
BRD9-215ENST00000518250 MMAAQ8IVH4 418 aaKnown RBP14.64□□□□□ -0.07
BRD9-215ENST00000518250 ARHGAP12Q8IWW6 846 aa14.64□□□□□ -0.07
BRD9-215ENST00000518250 TP53INP2Q8IXH6 220 aa14.64□□□□□ -0.07
BRD9-215ENST00000518250 LZTR1Q8N653 840 aa14.64□□□□□ -0.07
BRD9-215ENST00000518250 PCDH19Q8TAB3 1148 aa14.64□□□□□ -0.07
BRD9-215ENST00000518250 KIAA1524Q8TCG1 905 aa14.64□□□□□ -0.07
BRD9-215ENST00000518250 OR8D1Q8WZ84 308 aa14.64□□□□□ -0.07
BRD9-215ENST00000518250 RNF25Q96BH1 459 aaPredicted RBP14.64□□□□□ -0.07
BRD9-215ENST00000518250 SPACA7Q96KW9 195 aa14.64□□□□□ -0.07
BRD9-215ENST00000518250 PHOX2BQ99453 314 aa14.64□□□□□ -0.07
BRD9-215ENST00000518250 TSGA10Q9BZW7 698 aa14.64□□□□□ -0.07
BRD9-215ENST00000518250 TNKS2Q9H2K2 1166 aa14.64□□□□□ -0.07
BRD9-215ENST00000518250 SP110Q9HB58 689 aa14.64□□□□□ -0.07
BRD9-215ENST00000518250 CD93Q9NPY3 652 aa14.64□□□□□ -0.07
BRD9-215ENST00000518250 CYP8B1Q9UNU6 501 aa14.64□□□□□ -0.07
BRD9-215ENST00000518250 ANKRD36A6QL64 1941 aa14.64□□□□□ -0.07
BRD9-215ENST00000518250 ZSCAN5CA6NGD5 496 aaPredicted RBP14.63□□□□□ -0.07
BRD9-215ENST00000518250 J3KR12 359 aa14.63□□□□□ -0.07
BRD9-215ENST00000518250 PALMO75781 387 aa14.63□□□□□ -0.07
BRD9-215ENST00000518250 CD160O95971 181 aa14.63□□□□□ -0.07
BRD9-215ENST00000518250 DNTTP04053 509 aa14.63□□□□□ -0.07
BRD9-215ENST00000518250 RECQLP46063 649 aaPredicted RBP14.63□□□□□ -0.07
BRD9-215ENST00000518250 PSMD8P48556 350 aa14.63□□□□□ -0.07
BRD9-215ENST00000518250 MARCKSL1P49006 195 aa14.63□□□□□ -0.07
BRD9-215ENST00000518250 BYSLQ13895 437 aaKnown RBP14.63□□□□□ -0.07
BRD9-215ENST00000518250 LPAL2Q16609 132 aa14.63□□□□□ -0.07
BRD9-215ENST00000518250 MAP7D1Q3KQU3 841 aa14.63□□□□□ -0.07
BRD9-215ENST00000518250 NCBP2-AS2Q69YL0 99 aa14.63□□□□□ -0.07
BRD9-215ENST00000518250 ARHGAP36Q6ZRI8 547 aa14.63□□□□□ -0.07
BRD9-215ENST00000518250 RYBPQ8N488 228 aaPredicted RBP14.63□□□□□ -0.07
BRD9-215ENST00000518250 FAM160A2Q8N612 972 aaPredicted RBP14.63□□□□□ -0.07
BRD9-215ENST00000518250 FRMD1Q8N878 549 aa14.63□□□□□ -0.07
BRD9-215ENST00000518250 TRAF3IP1Q8TDR0 691 aaPredicted RBP14.63□□□□□ -0.07
BRD9-215ENST00000518250 GANCQ8TET4 914 aa14.63□□□□□ -0.07
BRD9-215ENST00000518250 CCDC114Q96M63 670 aa14.63□□□□□ -0.07
BRD9-215ENST00000518250 ZNF830Q96NB3 372 aaPredicted RBP14.63□□□□□ -0.07
BRD9-215ENST00000518250 MAK16Q9BXY0 300 aaKnown RBP14.63□□□□□ -0.07
BRD9-215ENST00000518250 TM6SF2Q9BZW4 377 aa14.63□□□□□ -0.07
BRD9-215ENST00000518250 CEP44Q9C0F1 390 aa14.63□□□□□ -0.07
BRD9-215ENST00000518250 RSPH9Q9H1X1 276 aaPredicted RBP14.63□□□□□ -0.07
BRD9-215ENST00000518250 UBA2Q9UBT2 640 aaPredicted RBP14.63□□□□□ -0.07
BRD9-215ENST00000518250 GUCA1BQ9UMX6 200 aa14.63□□□□□ -0.07
BRD9-215ENST00000518250 SBDSQ9Y3A5 250 aaKnown RBP eCLIP14.63□□□□□ -0.07
BRD9-215ENST00000518250 C3orf70A6NLC5 250 aaPredicted RBP14.62□□□□□ -0.07
BRD9-215ENST00000518250 MAP3K13O43283 966 aa14.62□□□□□ -0.07
BRD9-215ENST00000518250 KRT86O43790 486 aa14.62□□□□□ -0.07
BRD9-215ENST00000518250 MFSD11O43934 449 aa14.62□□□□□ -0.07
BRD9-215ENST00000518250 PRAMEF11O60813 436 aa14.62□□□□□ -0.07
BRD9-215ENST00000518250 ZNF217O75362 1048 aa14.62□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms