RNA–Protein interactions for RNA: ENST00000517904.1

CTNNA1-205, Transcript of catenin alpha 1, humanhuman

TSL 3

Gene CTNNA1, Length 661 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-205ENST00000517904 USP29Q9HBJ7 922 aa11.65□□□□□ -0.54
CTNNA1-205ENST00000517904 ST7Q9NRC1 585 aa11.65□□□□□ -0.54
CTNNA1-205ENST00000517904 GPR27Q9NS67 375 aa11.65□□□□□ -0.54
CTNNA1-205ENST00000517904 DNAJC28Q9NX36 388 aa11.65□□□□□ -0.54
CTNNA1-205ENST00000517904 SLC25A13Q9UJS0 675 aa11.65□□□□□ -0.54
CTNNA1-205ENST00000517904 ENTPD2Q9Y5L3 495 aa11.65□□□□□ -0.54
CTNNA1-205ENST00000517904 OR51B4Q9Y5P0 310 aa11.65□□□□□ -0.54
CTNNA1-205ENST00000517904 TRPM6Q9BX84 2022 aa11.65□□□□□ -0.54
CTNNA1-205ENST00000517904 SPENQ96T58 3664 aaKnown RBP11.65□□□□□ -0.54
CTNNA1-205ENST00000517904 NEMP2A6NFY4 417 aa11.64□□□□□ -0.55
CTNNA1-205ENST00000517904 CDRT15L2A8MXV6 281 aa11.64□□□□□ -0.55
CTNNA1-205ENST00000517904 KPNA3O00505 521 aaPredicted RBP11.64□□□□□ -0.55
CTNNA1-205ENST00000517904 SLC16A3O15427 465 aaKnown RBP11.64□□□□□ -0.55
CTNNA1-205ENST00000517904 SART1O43290 800 aaKnown RBP11.64□□□□□ -0.55
CTNNA1-205ENST00000517904 MT-CO1P00395 513 aa11.64□□□□□ -0.55
CTNNA1-205ENST00000517904 SRCP12931 536 aa11.64□□□□□ -0.55
CTNNA1-205ENST00000517904 RBMS1P29558 406 aaKnown RBP11.64□□□□□ -0.55
CTNNA1-205ENST00000517904 AKT2P31751 481 aa11.64□□□□□ -0.55
CTNNA1-205ENST00000517904 DUSP3P51452 185 aaPredicted RBP11.64□□□□□ -0.55
CTNNA1-205ENST00000517904 PMS1P54277 932 aaKnown RBP11.64□□□□□ -0.55
CTNNA1-205ENST00000517904 CLN3Q13286 438 aa11.64□□□□□ -0.55
CTNNA1-205ENST00000517904 FZD2Q14332 565 aa11.64□□□□□ -0.55
CTNNA1-205ENST00000517904 DRAP1Q14919 205 aaPredicted RBP11.64□□□□□ -0.55
CTNNA1-205ENST00000517904 TAF5Q15542 800 aa11.64□□□□□ -0.55
CTNNA1-205ENST00000517904 TMEM259Q4ZIN3 620 aa11.64□□□□□ -0.55
CTNNA1-205ENST00000517904 RABGAP1LQ5R372 815 aa11.64□□□□□ -0.55
CTNNA1-205ENST00000517904 TTC39BQ5VTQ0 682 aaPredicted RBP11.64□□□□□ -0.55
CTNNA1-205ENST00000517904 ZCCHC8Q6NZY4 707 aaKnown RBP11.64□□□□□ -0.55
CTNNA1-205ENST00000517904 NEK5Q6P3R8 708 aa11.64□□□□□ -0.55
CTNNA1-205ENST00000517904 GUSBP11Q6P575 273 aa11.64□□□□□ -0.55
CTNNA1-205ENST00000517904 CRTC1Q6UUV9 634 aa11.64□□□□□ -0.55
CTNNA1-205ENST00000517904 CCDC81Q6ZN84 652 aa11.64□□□□□ -0.55
CTNNA1-205ENST00000517904 KRBA2Q6ZNG9 492 aa11.64□□□□□ -0.55
CTNNA1-205ENST00000517904 Q6ZSR6 202 aa11.64□□□□□ -0.55
CTNNA1-205ENST00000517904 ATP6V0D2Q8N8Y2 350 aa11.64□□□□□ -0.55
CTNNA1-205ENST00000517904 EXD3Q8N9H8 876 aa11.64□□□□□ -0.55
CTNNA1-205ENST00000517904 OR2A12Q8NGT7 310 aa11.64□□□□□ -0.55
CTNNA1-205ENST00000517904 IFT43Q96FT9 208 aa11.64□□□□□ -0.55
CTNNA1-205ENST00000517904 BMFQ96LC9 184 aa11.64□□□□□ -0.55
CTNNA1-205ENST00000517904 DUSP23Q9BVJ7 150 aa11.64□□□□□ -0.55
CTNNA1-205ENST00000517904 TRIM4Q9C037 500 aa11.64□□□□□ -0.55
CTNNA1-205ENST00000517904 POPDC2Q9HBU9 364 aa11.64□□□□□ -0.55
CTNNA1-205ENST00000517904 KLF15Q9UIH9 416 aa11.64□□□□□ -0.55
CTNNA1-205ENST00000517904 PCDHGA8Q9Y5G5 932 aa11.64□□□□□ -0.55
CTNNA1-205ENST00000517904 LRRK2Q5S007 2527 aa11.64□□□□□ -0.55
CTNNA1-205ENST00000517904 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP11.63□□□□□ -0.55
CTNNA1-205ENST00000517904 CPED1A4D0V7 1026 aa11.63□□□□□ -0.55
CTNNA1-205ENST00000517904 POM121BA6NF01 834 aa11.63□□□□□ -0.55
CTNNA1-205ENST00000517904 A6NNZ2 444 aa11.63□□□□□ -0.55
CTNNA1-205ENST00000517904 E5RJQ4 531 aa11.63□□□□□ -0.55
CTNNA1-205ENST00000517904 K7ERQ8 282 aa11.63□□□□□ -0.55
CTNNA1-205ENST00000517904 EFSO43281 561 aa11.63□□□□□ -0.55
CTNNA1-205ENST00000517904 CSF2P04141 144 aa11.63□□□□□ -0.55
CTNNA1-205ENST00000517904 NME1P15531 152 aaKnown RBP11.63□□□□□ -0.55
CTNNA1-205ENST00000517904 CHRNA3P32297 505 aa11.63□□□□□ -0.55
CTNNA1-205ENST00000517904 GGCXP38435 758 aa11.63□□□□□ -0.55
CTNNA1-205ENST00000517904 PRCPP42785 496 aa11.63□□□□□ -0.55
CTNNA1-205ENST00000517904 FMO5P49326 533 aa11.63□□□□□ -0.55
CTNNA1-205ENST00000517904 CSRP3P50461 194 aa11.63□□□□□ -0.55
CTNNA1-205ENST00000517904 PDX1P52945 283 aa11.63□□□□□ -0.55
CTNNA1-205ENST00000517904 HNRNPKP61978 463 aaKnown RBP eCLIP11.63□□□□□ -0.55
CTNNA1-205ENST00000517904 YWHAZP63104 245 aaKnown RBP11.63□□□□□ -0.55
CTNNA1-205ENST00000517904 SRSF1Q07955 248 aaKnown RBP eCLIP11.63□□□□□ -0.55
CTNNA1-205ENST00000517904 ZNF177Q13360 481 aaPredicted RBP11.63□□□□□ -0.55
CTNNA1-205ENST00000517904 FGL2Q14314 439 aa11.63□□□□□ -0.55
CTNNA1-205ENST00000517904 ARL13BQ3SXY8 428 aa11.63□□□□□ -0.55
CTNNA1-205ENST00000517904 PERM1Q5SV97 790 aa11.63□□□□□ -0.55
CTNNA1-205ENST00000517904 TPRG1LQ5T0D9 272 aa11.63□□□□□ -0.55
CTNNA1-205ENST00000517904 DENND1BQ6P3S1 775 aa11.63□□□□□ -0.55
CTNNA1-205ENST00000517904 FOXR1Q6PIV2 292 aa11.63□□□□□ -0.55
CTNNA1-205ENST00000517904 EFL1Q7Z2Z2 1120 aaKnown RBP11.63□□□□□ -0.55
CTNNA1-205ENST00000517904 PTAR1Q7Z6K3 402 aaPredicted RBP11.63□□□□□ -0.55
CTNNA1-205ENST00000517904 PPM1KQ8N3J5 372 aa11.63□□□□□ -0.55
CTNNA1-205ENST00000517904 CHST14Q8NCH0 376 aa11.63□□□□□ -0.55
CTNNA1-205ENST00000517904 LMO3Q8TAP4 145 aa11.63□□□□□ -0.55
CTNNA1-205ENST00000517904 RPRD1AQ96P16 312 aaPredicted RBP11.63□□□□□ -0.55
CTNNA1-205ENST00000517904 NT5C1BQ96P26 610 aa11.63□□□□□ -0.55
CTNNA1-205ENST00000517904 SLC4A5Q9BY07 1137 aa11.63□□□□□ -0.55
CTNNA1-205ENST00000517904 GOLPH3LQ9H4A5 285 aa11.63□□□□□ -0.55
CTNNA1-205ENST00000517904 SLTMQ9NWH9 1034 aaKnown RBP eCLIP11.63□□□□□ -0.55
CTNNA1-205ENST00000517904 VPS28Q9UK41 221 aa11.63□□□□□ -0.55
CTNNA1-205ENST00000517904 HS3ST2Q9Y278 367 aa11.63□□□□□ -0.55
CTNNA1-205ENST00000517904 DOPEY2Q9Y3R5 2298 aa11.63□□□□□ -0.55
CTNNA1-205ENST00000517904 SPTY2D1-AS1A0A0U1RR47 76 aa11.62□□□□□ -0.55
CTNNA1-205ENST00000517904 EME2A4GXA9 379 aaPredicted RBP11.62□□□□□ -0.55
CTNNA1-205ENST00000517904 TRIM49BA6NDI0 452 aa11.62□□□□□ -0.55
CTNNA1-205ENST00000517904 RAD51BO15315 384 aa11.62□□□□□ -0.55
CTNNA1-205ENST00000517904 SMAD6O43541 496 aaKnown RBP11.62□□□□□ -0.55
CTNNA1-205ENST00000517904 SNAP91O60641 907 aa11.62□□□□□ -0.55
CTNNA1-205ENST00000517904 PCDH8O95206 1070 aa11.62□□□□□ -0.55
CTNNA1-205ENST00000517904 ACADSBP45954 432 aa11.62□□□□□ -0.55
CTNNA1-205ENST00000517904 OXCT1P55809 520 aa11.62□□□□□ -0.55
CTNNA1-205ENST00000517904 FKBP3Q00688 224 aaKnown RBP11.62□□□□□ -0.55
CTNNA1-205ENST00000517904 NFATC3Q12968 1075 aa11.62□□□□□ -0.55
CTNNA1-205ENST00000517904 AUHQ13825 339 aaKnown RBP11.62□□□□□ -0.55
CTNNA1-205ENST00000517904 DEFB133Q30KQ1 61 aa11.62□□□□□ -0.55
CTNNA1-205ENST00000517904 ZSCAN23Q3MJ62 389 aa11.62□□□□□ -0.55
CTNNA1-205ENST00000517904 LINC00303Q3SY05 128 aa11.62□□□□□ -0.55
CTNNA1-205ENST00000517904 ANKRD40Q6AI12 368 aa11.62□□□□□ -0.55
CTNNA1-205ENST00000517904 KYAT3Q6YP21 454 aaKnown RBP11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms