RNA–Protein interactions for RNA: ENST00000515562.1

DDX41-217, Transcript of DEAD-box helicase 41, humanhuman

TSL 1 (best)

Gene DDX41, Length 1,184 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-217ENST00000515562 CHRNB2P17787 502 aa17.9■□□□□ 0.46
DDX41-217ENST00000515562 GSCP56915 257 aaPredicted RBP17.9■□□□□ 0.46
DDX41-217ENST00000515562 ATP11AP98196 1134 aa17.9■□□□□ 0.46
DDX41-217ENST00000515562 CCDC15Q0P6D6 951 aa17.9■□□□□ 0.46
DDX41-217ENST00000515562 CNTN1Q12860 1018 aa17.9■□□□□ 0.46
DDX41-217ENST00000515562 NAPEPLDQ6IQ20 393 aa17.9■□□□□ 0.46
DDX41-217ENST00000515562 RETSATQ6NUM9 610 aa17.9■□□□□ 0.46
DDX41-217ENST00000515562 PRPF39Q86UA1 669 aaKnown RBP17.9■□□□□ 0.46
DDX41-217ENST00000515562 TRIM69Q86WT6 500 aa17.9■□□□□ 0.46
DDX41-217ENST00000515562 ZCCHC14Q8WYQ9 949 aaKnown RBP17.9■□□□□ 0.46
DDX41-217ENST00000515562 ELF4Q99607 663 aaPredicted RBP17.9■□□□□ 0.46
DDX41-217ENST00000515562 PREBQ9HCU5 417 aa17.9■□□□□ 0.46
DDX41-217ENST00000515562 GDF3Q9NR23 364 aa17.9■□□□□ 0.46
DDX41-217ENST00000515562 ZNF212Q9UDV6 495 aa17.9■□□□□ 0.46
DDX41-217ENST00000515562 DMTF1Q9Y222 760 aa17.9■□□□□ 0.46
DDX41-217ENST00000515562 BTBD3Q9Y2F9 522 aa17.9■□□□□ 0.46
DDX41-217ENST00000515562 A0A1W2PR77 199 aa17.89■□□□□ 0.45
DDX41-217ENST00000515562 PLK4O00444 970 aa17.89■□□□□ 0.45
DDX41-217ENST00000515562 KCNK3O14649 394 aa17.89■□□□□ 0.45
DDX41-217ENST00000515562 MT-CO1P00395 513 aa17.89■□□□□ 0.45
DDX41-217ENST00000515562 PRNPP04156 253 aa17.89■□□□□ 0.45
DDX41-217ENST00000515562 WNT1P04628 370 aa17.89■□□□□ 0.45
DDX41-217ENST00000515562 RRM1P23921 792 aa17.89■□□□□ 0.45
DDX41-217ENST00000515562 ETFBP38117 255 aa17.89■□□□□ 0.45
DDX41-217ENST00000515562 PTPN9P43378 593 aa17.89■□□□□ 0.45
DDX41-217ENST00000515562 RECQLP46063 649 aaPredicted RBP17.89■□□□□ 0.45
DDX41-217ENST00000515562 ARRB1P49407 418 aaPredicted RBP17.89■□□□□ 0.45
DDX41-217ENST00000515562 NRG1Q02297 640 aaPredicted RBP17.89■□□□□ 0.45
DDX41-217ENST00000515562 CDO1Q16878 200 aa17.89■□□□□ 0.45
DDX41-217ENST00000515562 POM121L1PQ3SYA9 428 aa17.89■□□□□ 0.45
DDX41-217ENST00000515562 CCDC183Q5T5S1 534 aa17.89■□□□□ 0.45
DDX41-217ENST00000515562 C22orf39Q6P5X5 142 aa17.89■□□□□ 0.45
DDX41-217ENST00000515562 STRADAQ7RTN6 431 aa17.89■□□□□ 0.45
DDX41-217ENST00000515562 PNPLA1Q8N8W4 532 aa17.89■□□□□ 0.45
DDX41-217ENST00000515562 TMIEQ8NEW7 156 aa17.89■□□□□ 0.45
DDX41-217ENST00000515562 OR2A12Q8NGT7 310 aa17.89■□□□□ 0.45
DDX41-217ENST00000515562 SLC30A5Q8TAD4 765 aa17.89■□□□□ 0.45
DDX41-217ENST00000515562 RXFP2Q8WXD0 754 aa17.89■□□□□ 0.45
DDX41-217ENST00000515562 ERGIC2Q96RQ1 377 aa17.89■□□□□ 0.45
DDX41-217ENST00000515562 RETREG1Q9H6L5 497 aa17.89■□□□□ 0.45
DDX41-217ENST00000515562 DYRK4Q9NR20 520 aa17.89■□□□□ 0.45
DDX41-217ENST00000515562 C2CD4BA6NLJ0 364 aa17.88■□□□□ 0.45
DDX41-217ENST00000515562 K7ERQ8 282 aa17.88■□□□□ 0.45
DDX41-217ENST00000515562 CBX4O00257 560 aa17.88■□□□□ 0.45
DDX41-217ENST00000515562 KPNA3O00505 521 aaPredicted RBP17.88■□□□□ 0.45
DDX41-217ENST00000515562 TNFSF14O43557 240 aa17.88■□□□□ 0.45
DDX41-217ENST00000515562 CALB1P05937 261 aa17.88■□□□□ 0.45
DDX41-217ENST00000515562 UNGP13051 313 aaPredicted RBP17.88■□□□□ 0.45
DDX41-217ENST00000515562 CDK11BP21127 795 aaKnown RBP17.88■□□□□ 0.45
DDX41-217ENST00000515562 CHRNA3P32297 505 aa17.88■□□□□ 0.45
DDX41-217ENST00000515562 SERPINH1P50454 418 aaKnown RBP17.88■□□□□ 0.45
DDX41-217ENST00000515562 IL9RQ01113 521 aa17.88■□□□□ 0.45
DDX41-217ENST00000515562 GNA12Q03113 381 aa17.88■□□□□ 0.45
DDX41-217ENST00000515562 UBXN1Q04323 297 aa17.88■□□□□ 0.45
DDX41-217ENST00000515562 C15orf59Q2T9L4 293 aaPredicted RBP17.88■□□□□ 0.45
DDX41-217ENST00000515562 SETMARQ53H47 684 aaPredicted RBP17.88■□□□□ 0.45
DDX41-217ENST00000515562 ARTNQ5T4W7 220 aa17.88■□□□□ 0.45
DDX41-217ENST00000515562 LINGO4Q6UY18 593 aa17.88■□□□□ 0.45
DDX41-217ENST00000515562 SLCO6A1Q86UG4 719 aa17.88■□□□□ 0.45
DDX41-217ENST00000515562 IQCHQ86VS3 1027 aa17.88■□□□□ 0.45
DDX41-217ENST00000515562 OXR1Q8N573 874 aa17.88■□□□□ 0.45
DDX41-217ENST00000515562 MFSD2AQ8NA29 543 aa17.88■□□□□ 0.45
DDX41-217ENST00000515562 OR7D4Q8NG98 312 aa17.88■□□□□ 0.45
DDX41-217ENST00000515562 SPON2Q9BUD6 331 aa17.88■□□□□ 0.45
DDX41-217ENST00000515562 CEP44Q9C0F1 390 aa17.88■□□□□ 0.45
DDX41-217ENST00000515562 ATP13A1Q9HD20 1204 aa17.88■□□□□ 0.45
DDX41-217ENST00000515562 TOR4AQ9NXH8 423 aa17.88■□□□□ 0.45
DDX41-217ENST00000515562 ADAM22Q9P0K1 906 aa17.88■□□□□ 0.45
DDX41-217ENST00000515562 OR12D3Q9UGF7 316 aa17.88■□□□□ 0.45
DDX41-217ENST00000515562 COL5A1P20908 1838 aaPredicted RBP17.88■□□□□ 0.45
DDX41-217ENST00000515562 KNL1Q8NG31 2342 aa17.88■□□□□ 0.45
DDX41-217ENST00000515562 IGF2RP11717 2491 aa17.88■□□□□ 0.45
DDX41-217ENST00000515562 CABIN1Q9Y6J0 2220 aa17.87■□□□□ 0.45
DDX41-217ENST00000515562 CXorf51AA0A1B0GTR3 108 aa17.87■□□□□ 0.45
DDX41-217ENST00000515562 LRRC10BA6NIK2 292 aa17.87■□□□□ 0.45
DDX41-217ENST00000515562 TLR4O00206 839 aa17.87■□□□□ 0.45
DDX41-217ENST00000515562 WNT9AO14904 365 aa17.87■□□□□ 0.45
DDX41-217ENST00000515562 SMAD6O43541 496 aaKnown RBP17.87■□□□□ 0.45
DDX41-217ENST00000515562 MAGEC1O60732 1142 aa17.87■□□□□ 0.45
DDX41-217ENST00000515562 DKK1O94907 266 aa17.87■□□□□ 0.45
DDX41-217ENST00000515562 CTSLP07711 333 aa17.87■□□□□ 0.45
DDX41-217ENST00000515562 ATXN1LP0C7T5 689 aaKnown RBP17.87■□□□□ 0.45
DDX41-217ENST00000515562 KRT3P12035 628 aa17.87■□□□□ 0.45
DDX41-217ENST00000515562 ADRA1BP35368 520 aa17.87■□□□□ 0.45
DDX41-217ENST00000515562 NXPH1P58417 271 aa17.87■□□□□ 0.45
DDX41-217ENST00000515562 SLC20A2Q08357 652 aa17.87■□□□□ 0.45
DDX41-217ENST00000515562 OVGP1Q12889 678 aa17.87■□□□□ 0.45
DDX41-217ENST00000515562 PTP4A2Q12974 167 aa17.87■□□□□ 0.45
DDX41-217ENST00000515562 CLEC16AQ2KHT3 1053 aa17.87■□□□□ 0.45
DDX41-217ENST00000515562 CCDC14Q49A88 953 aa17.87■□□□□ 0.45
DDX41-217ENST00000515562 PIP5KL1Q5T9C9 394 aa17.87■□□□□ 0.45
DDX41-217ENST00000515562 MANEALQ5VSG8 457 aa17.87■□□□□ 0.45
DDX41-217ENST00000515562 NEK5Q6P3R8 708 aa17.87■□□□□ 0.45
DDX41-217ENST00000515562 PHF13Q86YI8 300 aaPredicted RBP17.87■□□□□ 0.45
DDX41-217ENST00000515562 DRC7Q8IY82 874 aa17.87■□□□□ 0.45
DDX41-217ENST00000515562 C3orf20Q8ND61 904 aa17.87■□□□□ 0.45
DDX41-217ENST00000515562 PPP1R16AQ96I34 528 aa17.87■□□□□ 0.45
DDX41-217ENST00000515562 OSBPL2Q9H1P3 480 aa17.87■□□□□ 0.45
DDX41-217ENST00000515562 ERVMER34-1Q9H9K5 563 aa17.87■□□□□ 0.45
DDX41-217ENST00000515562 ARHGAP20Q9P2F6 1191 aa17.87■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms