RNA–Protein interactions for RNA: ENST00000515516.1

TCOF1-215, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 5

Gene TCOF1, Length 661 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-215ENST00000515516 PLRG1O43660 514 aaKnown RBP13.98□□□□□ -0.17
TCOF1-215ENST00000515516 PCDHGA12O60330 932 aa13.98□□□□□ -0.17
TCOF1-215ENST00000515516 MAGEC1O60732 1142 aa13.98□□□□□ -0.17
TCOF1-215ENST00000515516 UNGP13051 313 aaPredicted RBP13.98□□□□□ -0.17
TCOF1-215ENST00000515516 RRM1P23921 792 aa13.98□□□□□ -0.17
TCOF1-215ENST00000515516 MAT2AP31153 395 aaKnown RBP13.98□□□□□ -0.17
TCOF1-215ENST00000515516 ETFBP38117 255 aa13.98□□□□□ -0.17
TCOF1-215ENST00000515516 PTPN9P43378 593 aa13.98□□□□□ -0.17
TCOF1-215ENST00000515516 DNA2P51530 1060 aa13.98□□□□□ -0.17
TCOF1-215ENST00000515516 GNA12Q03113 381 aa13.98□□□□□ -0.17
TCOF1-215ENST00000515516 STAT4Q14765 748 aa13.98□□□□□ -0.17
TCOF1-215ENST00000515516 C15orf59Q2T9L4 293 aaPredicted RBP13.98□□□□□ -0.17
TCOF1-215ENST00000515516 SETMARQ53H47 684 aaPredicted RBP13.98□□□□□ -0.17
TCOF1-215ENST00000515516 NAPEPLDQ6IQ20 393 aa13.98□□□□□ -0.17
TCOF1-215ENST00000515516 LINGO4Q6UY18 593 aa13.98□□□□□ -0.17
TCOF1-215ENST00000515516 DBX2Q6ZNG2 339 aa13.98□□□□□ -0.17
TCOF1-215ENST00000515516 STRADAQ7RTN6 431 aa13.98□□□□□ -0.17
TCOF1-215ENST00000515516 RAB44Q7Z6P3 723 aaPredicted RBP13.98□□□□□ -0.17
TCOF1-215ENST00000515516 DRC7Q8IY82 874 aa13.98□□□□□ -0.17
TCOF1-215ENST00000515516 PNPLA1Q8N8W4 532 aa13.98□□□□□ -0.17
TCOF1-215ENST00000515516 TMIEQ8NEW7 156 aa13.98□□□□□ -0.17
TCOF1-215ENST00000515516 OR7D4Q8NG98 312 aa13.98□□□□□ -0.17
TCOF1-215ENST00000515516 ADAMTS14Q8WXS8 1223 aa13.98□□□□□ -0.17
TCOF1-215ENST00000515516 PPP1R16AQ96I34 528 aa13.98□□□□□ -0.17
TCOF1-215ENST00000515516 ERGIC2Q96RQ1 377 aa13.98□□□□□ -0.17
TCOF1-215ENST00000515516 PCDHB18PQ96TA0 734 aa13.98□□□□□ -0.17
TCOF1-215ENST00000515516 ELF4Q99607 663 aaPredicted RBP13.98□□□□□ -0.17
TCOF1-215ENST00000515516 AGPAT1Q99943 283 aa13.98□□□□□ -0.17
TCOF1-215ENST00000515516 OSBPL2Q9H1P3 480 aa13.98□□□□□ -0.17
TCOF1-215ENST00000515516 EBF2Q9HAK2 575 aa13.98□□□□□ -0.17
TCOF1-215ENST00000515516 PREBQ9HCU5 417 aa13.98□□□□□ -0.17
TCOF1-215ENST00000515516 KLK13Q9UKR3 277 aa13.98□□□□□ -0.17
TCOF1-215ENST00000515516 HPCAL4Q9UM19 191 aa13.98□□□□□ -0.17
TCOF1-215ENST00000515516 DMTF1Q9Y222 760 aa13.98□□□□□ -0.17
TCOF1-215ENST00000515516 ACACBO00763 2458 aa13.97□□□□□ -0.17
TCOF1-215ENST00000515516 A0A1B0GTQ1 180 aa13.97□□□□□ -0.17
TCOF1-215ENST00000515516 GOLGA8CPA6NN73 597 aa13.97□□□□□ -0.17
TCOF1-215ENST00000515516 TLR4O00206 839 aa13.97□□□□□ -0.17
TCOF1-215ENST00000515516 YKT6O15498 198 aa13.97□□□□□ -0.17
TCOF1-215ENST00000515516 KRT37O76014 449 aa13.97□□□□□ -0.17
TCOF1-215ENST00000515516 ITGAVP06756 1048 aa13.97□□□□□ -0.17
TCOF1-215ENST00000515516 FERP16591 822 aa13.97□□□□□ -0.17
TCOF1-215ENST00000515516 RHOQP17081 205 aa13.97□□□□□ -0.17
TCOF1-215ENST00000515516 GPD1P21695 349 aa13.97□□□□□ -0.17
TCOF1-215ENST00000515516 ARRB1P49407 418 aaPredicted RBP13.97□□□□□ -0.17
TCOF1-215ENST00000515516 METAP1P53582 386 aa13.97□□□□□ -0.17
TCOF1-215ENST00000515516 PPP2CBP62714 309 aa13.97□□□□□ -0.17
TCOF1-215ENST00000515516 PPP2CAP67775 309 aa13.97□□□□□ -0.17
TCOF1-215ENST00000515516 IL9RQ01113 521 aa13.97□□□□□ -0.17
TCOF1-215ENST00000515516 FILIP1LQ4L180 1135 aa13.97□□□□□ -0.17
TCOF1-215ENST00000515516 KCNT1Q5JUK3 1230 aa13.97□□□□□ -0.17
TCOF1-215ENST00000515516 DNAJC24Q6P3W2 148 aa13.97□□□□□ -0.17
TCOF1-215ENST00000515516 C22orf39Q6P5X5 142 aa13.97□□□□□ -0.17
TCOF1-215ENST00000515516 TRIM69Q86WT6 500 aa13.97□□□□□ -0.17
TCOF1-215ENST00000515516 PHF13Q86YI8 300 aaPredicted RBP13.97□□□□□ -0.17
TCOF1-215ENST00000515516 OXR1Q8N573 874 aa13.97□□□□□ -0.17
TCOF1-215ENST00000515516 MFSD2AQ8NA29 543 aa13.97□□□□□ -0.17
TCOF1-215ENST00000515516 OR2A12Q8NGT7 310 aa13.97□□□□□ -0.17
TCOF1-215ENST00000515516 JOSD2Q8TAC2 188 aa13.97□□□□□ -0.17
TCOF1-215ENST00000515516 FAM172AQ8WUF8 416 aa13.97□□□□□ -0.17
TCOF1-215ENST00000515516 CEP44Q9C0F1 390 aa13.97□□□□□ -0.17
TCOF1-215ENST00000515516 TNKS2Q9H2K2 1166 aa13.97□□□□□ -0.17
TCOF1-215ENST00000515516 IL36AQ9UHA7 158 aa13.97□□□□□ -0.17
TCOF1-215ENST00000515516 LAMA1P25391 3075 aa13.96□□□□□ -0.17
TCOF1-215ENST00000515516 A0A1W2PR77 199 aa13.96□□□□□ -0.17
TCOF1-215ENST00000515516 SIGLEC16A6NMB1 481 aa13.96□□□□□ -0.17
TCOF1-215ENST00000515516 PRAMEF26H0Y7S4 382 aa13.96□□□□□ -0.17
TCOF1-215ENST00000515516 SMAD6O43541 496 aaKnown RBP13.96□□□□□ -0.17
TCOF1-215ENST00000515516 TNFSF14O43557 240 aa13.96□□□□□ -0.17
TCOF1-215ENST00000515516 LATO43561 262 aa13.96□□□□□ -0.17
TCOF1-215ENST00000515516 GJB6O95452 261 aa13.96□□□□□ -0.17
TCOF1-215ENST00000515516 WNT1P04628 370 aa13.96□□□□□ -0.17
TCOF1-215ENST00000515516 PLEKP08567 350 aaPredicted RBP13.96□□□□□ -0.17
TCOF1-215ENST00000515516 GLDCP23378 1020 aa13.96□□□□□ -0.17
TCOF1-215ENST00000515516 MAPKAPK2P49137 400 aa13.96□□□□□ -0.17
TCOF1-215ENST00000515516 SERPINH1P50454 418 aaKnown RBP13.96□□□□□ -0.17
TCOF1-215ENST00000515516 GSCP56915 257 aaPredicted RBP13.96□□□□□ -0.17
TCOF1-215ENST00000515516 GEMIN4P57678 1058 aaKnown RBP13.96□□□□□ -0.17
TCOF1-215ENST00000515516 NRG1Q02297 640 aaPredicted RBP13.96□□□□□ -0.17
TCOF1-215ENST00000515516 C1QBPQ07021 282 aaKnown RBP13.96□□□□□ -0.17
TCOF1-215ENST00000515516 OVGP1Q12889 678 aa13.96□□□□□ -0.17
TCOF1-215ENST00000515516 NCAPHQ15003 741 aa13.96□□□□□ -0.17
TCOF1-215ENST00000515516 ANO6Q4KMQ2 910 aa13.96□□□□□ -0.17
TCOF1-215ENST00000515516 ARSIQ5FYB1 569 aa13.96□□□□□ -0.17
TCOF1-215ENST00000515516 AGBL4Q5VU57 503 aa13.96□□□□□ -0.17
TCOF1-215ENST00000515516 PPP1R2P3Q6NXS1 205 aa13.96□□□□□ -0.17
TCOF1-215ENST00000515516 NEK5Q6P3R8 708 aa13.96□□□□□ -0.17
TCOF1-215ENST00000515516 SCYL2Q6P3W7 929 aa13.96□□□□□ -0.17
TCOF1-215ENST00000515516 PCDH20Q8N6Y1 951 aaKnown RBP13.96□□□□□ -0.17
TCOF1-215ENST00000515516 KDF1Q8NAX2 398 aaPredicted RBP13.96□□□□□ -0.17
TCOF1-215ENST00000515516 C3orf20Q8ND61 904 aa13.96□□□□□ -0.17
TCOF1-215ENST00000515516 GRIN3AQ8TCU5 1115 aa13.96□□□□□ -0.17
TCOF1-215ENST00000515516 GATA6Q92908 595 aa13.96□□□□□ -0.17
TCOF1-215ENST00000515516 FAM131CQ96AQ9 280 aa13.96□□□□□ -0.17
TCOF1-215ENST00000515516 TBC1D31Q96DN5 1066 aa13.96□□□□□ -0.17
TCOF1-215ENST00000515516 FTSJ1Q9UET6 329 aa13.96□□□□□ -0.17
TCOF1-215ENST00000515516 BTBD3Q9Y2F9 522 aa13.96□□□□□ -0.17
TCOF1-215ENST00000515516 TPRP12270 2363 aaKnown RBP13.96□□□□□ -0.18
TCOF1-215ENST00000515516 CEP192Q8TEP8 1941 aa13.96□□□□□ -0.18
TCOF1-215ENST00000515516 FAM221BA6H8Z2 402 aa13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 91.7 ms