RNA–Protein interactions for RNA: ENST00000515311.5

LSM6-207, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 4

Gene LSM6, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-207ENST00000515311 ZNF687Q8N1G0 1237 aa21.41■■□□□ 1.02
LSM6-207ENST00000515311 PRELID2Q8N945 189 aa21.41■■□□□ 1.02
LSM6-207ENST00000515311 CASKIN2Q8WXE0 1202 aa21.41■■□□□ 1.02
LSM6-207ENST00000515311 ERVW-1Q9UQF0 538 aa21.41■■□□□ 1.02
LSM6-207ENST00000515311 VCANP13611 3396 aa21.4■■□□□ 1.02
LSM6-207ENST00000515311 KANSL1LA0AUZ9 987 aa21.4■■□□□ 1.02
LSM6-207ENST00000515311 MATN3O15232 486 aa21.4■■□□□ 1.02
LSM6-207ENST00000515311 MTSS1O43312 755 aa21.4■■□□□ 1.02
LSM6-207ENST00000515311 PEX11BO96011 259 aa21.4■■□□□ 1.02
LSM6-207ENST00000515311 RBP3P10745 1247 aa21.4■■□□□ 1.02
LSM6-207ENST00000515311 CHRM1P11229 460 aaPredicted RBP21.4■■□□□ 1.02
LSM6-207ENST00000515311 CD72P21854 359 aa21.4■■□□□ 1.02
LSM6-207ENST00000515311 CTSOP43234 321 aaPredicted RBP21.4■■□□□ 1.02
LSM6-207ENST00000515311 SERPINH1P50454 418 aaKnown RBP21.4■■□□□ 1.02
LSM6-207ENST00000515311 CLCN6P51797 869 aa21.4■■□□□ 1.02
LSM6-207ENST00000515311 SIGLEC14Q08ET2 396 aa21.4■■□□□ 1.02
LSM6-207ENST00000515311 RFTN1Q14699 578 aaPredicted RBP21.4■■□□□ 1.02
LSM6-207ENST00000515311 CYP1B1Q16678 543 aa21.4■■□□□ 1.02
LSM6-207ENST00000515311 PTPRNQ16849 979 aa21.4■■□□□ 1.02
LSM6-207ENST00000515311 WHAMMP3Q1A5X7 153 aa21.4■■□□□ 1.02
LSM6-207ENST00000515311 INO80DQ53TQ3 878 aaPredicted RBP21.4■■□□□ 1.02
LSM6-207ENST00000515311 TMCO4Q5TGY1 634 aa21.4■■□□□ 1.02
LSM6-207ENST00000515311 CCDC13Q8IYE1 715 aa21.4■■□□□ 1.02
LSM6-207ENST00000515311 C12orf50Q8NA57 414 aaPredicted RBP21.4■■□□□ 1.02
LSM6-207ENST00000515311 C1orf54Q8WWF1 131 aa21.4■■□□□ 1.02
LSM6-207ENST00000515311 ATG4AQ8WYN0 398 aa21.4■■□□□ 1.02
LSM6-207ENST00000515311 MAML1Q92585 1016 aa21.4■■□□□ 1.02
LSM6-207ENST00000515311 MRGPRX3Q96LB0 322 aa21.4■■□□□ 1.02
LSM6-207ENST00000515311 FAM118BQ9BPY3 351 aa21.4■■□□□ 1.02
LSM6-207ENST00000515311 AP1M1Q9BXS5 423 aa21.4■■□□□ 1.02
LSM6-207ENST00000515311 UBA2Q9UBT2 640 aaPredicted RBP21.4■■□□□ 1.02
LSM6-207ENST00000515311 DNPEPQ9ULA0 475 aa21.4■■□□□ 1.02
LSM6-207ENST00000515311 PLA2G4CQ9UP65 541 aa21.4■■□□□ 1.02
LSM6-207ENST00000515311 BCLAF3A2AJT9 711 aaKnown RBP21.39■■□□□ 1.01
LSM6-207ENST00000515311 H7C0C1 242 aa21.39■■□□□ 1.01
LSM6-207ENST00000515311 PDE2AO00408 941 aaPredicted RBP21.39■■□□□ 1.01
LSM6-207ENST00000515311 HNRNPLP14866 589 aaKnown RBP eCLIP21.39■■□□□ 1.01
LSM6-207ENST00000515311 KIR2DL1P43626 348 aaPredicted RBP21.39■■□□□ 1.01
LSM6-207ENST00000515311 ATP5OP48047 213 aa21.39■■□□□ 1.01
LSM6-207ENST00000515311 NUMBP49757 651 aa21.39■■□□□ 1.01
LSM6-207ENST00000515311 CKAP4Q07065 602 aaKnown RBP21.39■■□□□ 1.01
LSM6-207ENST00000515311 AP1B1Q10567 949 aa21.39■■□□□ 1.01
LSM6-207ENST00000515311 BYSLQ13895 437 aaKnown RBP21.39■■□□□ 1.01
LSM6-207ENST00000515311 HNRNPDQ14103 355 aaKnown RBP21.39■■□□□ 1.01
LSM6-207ENST00000515311 OASLQ15646 514 aaKnown RBP21.39■■□□□ 1.01
LSM6-207ENST00000515311 DGKKQ5KSL6 1271 aa21.39■■□□□ 1.01
LSM6-207ENST00000515311 LINGO4Q6UY18 593 aa21.39■■□□□ 1.01
LSM6-207ENST00000515311 SH2D3CQ8N5H7 860 aa21.39■■□□□ 1.01
LSM6-207ENST00000515311 CYB5D2Q8WUJ1 264 aa21.39■■□□□ 1.01
LSM6-207ENST00000515311 NSMCE1Q8WV22 266 aa21.39■■□□□ 1.01
LSM6-207ENST00000515311 SORCS1Q8WY21 1168 aa21.39■■□□□ 1.01
LSM6-207ENST00000515311 LTB4R2Q9NPC1 389 aa21.39■■□□□ 1.01
LSM6-207ENST00000515311 THAP10Q9P2Z0 257 aaPredicted RBP21.39■■□□□ 1.01
LSM6-207ENST00000515311 NDRG2Q9UN36 371 aaKnown RBP21.39■■□□□ 1.01
LSM6-207ENST00000515311 MRFAP1Q9Y605 127 aa21.39■■□□□ 1.01
LSM6-207ENST00000515311 CD160O95971 181 aa21.38■■□□□ 1.01
LSM6-207ENST00000515311 ITGAVP06756 1048 aa21.38■■□□□ 1.01
LSM6-207ENST00000515311 ALADP13716 330 aa21.38■■□□□ 1.01
LSM6-207ENST00000515311 NNMTP40261 264 aa21.38■■□□□ 1.01
LSM6-207ENST00000515311 STK19P49842 368 aaPredicted RBP21.38■■□□□ 1.01
LSM6-207ENST00000515311 ST8SIA6P61647 398 aa21.38■■□□□ 1.01
LSM6-207ENST00000515311 IFI35P80217 286 aaPredicted RBP21.38■■□□□ 1.01
LSM6-207ENST00000515311 LRRC32Q14392 662 aa21.38■■□□□ 1.01
LSM6-207ENST00000515311 HEATR6Q6AI08 1181 aaKnown RBP21.38■■□□□ 1.01
LSM6-207ENST00000515311 DARS2Q6PI48 645 aaKnown RBP21.38■■□□□ 1.01
LSM6-207ENST00000515311 ZNF572Q7Z3I7 529 aaPredicted RBP21.38■■□□□ 1.01
LSM6-207ENST00000515311 SYNPOQ8N3V7 929 aa21.38■■□□□ 1.01
LSM6-207ENST00000515311 ATP11CQ8NB49 1132 aa21.38■■□□□ 1.01
LSM6-207ENST00000515311 MYO19Q96H55 970 aa21.38■■□□□ 1.01
LSM6-207ENST00000515311 RPL10LQ96L21 214 aaKnown RBP21.38■■□□□ 1.01
LSM6-207ENST00000515311 FERMT1Q9BQL6 677 aa21.38■■□□□ 1.01
LSM6-207ENST00000515311 OSBPL6Q9BZF3 934 aa21.38■■□□□ 1.01
LSM6-207ENST00000515311 CEP44Q9C0F1 390 aa21.38■■□□□ 1.01
LSM6-207ENST00000515311 TBC1D17Q9HA65 648 aa21.38■■□□□ 1.01
LSM6-207ENST00000515311 HCN2Q9UL51 889 aa21.38■■□□□ 1.01
LSM6-207ENST00000515311 TTC28Q96AY4 2481 aa21.38■■□□□ 1.01
LSM6-207ENST00000515311 CFAP69A5D8W1 941 aa21.37■■□□□ 1.01
LSM6-207ENST00000515311 ATP9BO43861 1147 aa21.37■■□□□ 1.01
LSM6-207ENST00000515311 PHF2O75151 1096 aa21.37■■□□□ 1.01
LSM6-207ENST00000515311 MT-CO1P00395 513 aa21.37■■□□□ 1.01
LSM6-207ENST00000515311 CHRNB1P11230 501 aa21.37■■□□□ 1.01
LSM6-207ENST00000515311 SRCP12931 536 aa21.37■■□□□ 1.01
LSM6-207ENST00000515311 CCNB1P14635 433 aa21.37■■□□□ 1.01
LSM6-207ENST00000515311 VAV1P15498 845 aa21.37■■□□□ 1.01
LSM6-207ENST00000515311 TARSP26639 723 aaKnown RBP21.37■■□□□ 1.01
LSM6-207ENST00000515311 RENBPP51606 427 aa21.37■■□□□ 1.01
LSM6-207ENST00000515311 MRPS21P82921 87 aaKnown RBP21.37■■□□□ 1.01
LSM6-207ENST00000515311 ENPP2Q13822 863 aa21.37■■□□□ 1.01
LSM6-207ENST00000515311 ZNF234Q14588 700 aa21.37■■□□□ 1.01
LSM6-207ENST00000515311 LBRQ14739 615 aaKnown RBP21.37■■□□□ 1.01
LSM6-207ENST00000515311 DNTTIP2Q5QJE6 756 aaKnown RBP21.37■■□□□ 1.01
LSM6-207ENST00000515311 EGFLAMQ63HQ2 1017 aa21.37■■□□□ 1.01
LSM6-207ENST00000515311 TRMT11Q7Z4G4 463 aaKnown RBP21.37■■□□□ 1.01
LSM6-207ENST00000515311 TEX26Q8N6G2 289 aa21.37■■□□□ 1.01
LSM6-207ENST00000515311 ZNF513Q8N8E2 541 aaPredicted RBP21.37■■□□□ 1.01
LSM6-207ENST00000515311 LRRN4Q8WUT4 740 aa21.37■■□□□ 1.01
LSM6-207ENST00000515311 HTR3CQ8WXA8 447 aa21.37■■□□□ 1.01
LSM6-207ENST00000515311 ISG20Q96AZ6 181 aaKnown RBP21.37■■□□□ 1.01
LSM6-207ENST00000515311 AMACRQ9UHK6 382 aa21.37■■□□□ 1.01
LSM6-207ENST00000515311 SLC8A2Q9UPR5 921 aa21.37■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms