RNA–Protein interactions for RNA: ENST00000514987.5

NUP54-217, Transcript of nucleoporin 54, humanhuman

TSL 2 BASIC

Gene NUP54, Length 1,563 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-217ENST00000514987 STMN2Q93045 179 aa15.11■□□□□ 0.01
NUP54-217ENST00000514987 FUBP3Q96I24 572 aaKnown RBP eCLIP15.11■□□□□ 0.01
NUP54-217ENST00000514987 VPS39Q96JC1 886 aa15.11■□□□□ 0.01
NUP54-217ENST00000514987 AGAP2Q99490 1192 aa15.11■□□□□ 0.01
NUP54-217ENST00000514987 FBXO44Q9H4M3 255 aa15.11■□□□□ 0.01
NUP54-217ENST00000514987 NMRAL1Q9HBL8 299 aa15.11■□□□□ 0.01
NUP54-217ENST00000514987 IARS2Q9NSE4 1012 aaKnown RBP15.11■□□□□ 0.01
NUP54-217ENST00000514987 NKX1-2Q9UD57 310 aaPredicted RBP15.11■□□□□ 0.01
NUP54-217ENST00000514987 SHROOM3Q8TF72 1996 aa15.11■□□□□ 0.01
NUP54-217ENST00000514987 UTRNP46939 3433 aa15.11■□□□□ 0.01
NUP54-217ENST00000514987 ITM2AO43736 263 aa15.11■□□□□ 0.01
NUP54-217ENST00000514987 MAFKO60675 156 aa15.11■□□□□ 0.01
NUP54-217ENST00000514987 TRIM13O60858 407 aa15.11■□□□□ 0.01
NUP54-217ENST00000514987 ENTPD5O75356 428 aa15.11■□□□□ 0.01
NUP54-217ENST00000514987 OAZ2O95190 189 aa15.11■□□□□ 0.01
NUP54-217ENST00000514987 C2P06681 752 aa15.11■□□□□ 0.01
NUP54-217ENST00000514987 FLT3LGP49771 235 aa15.11■□□□□ 0.01
NUP54-217ENST00000514987 ASPHQ12797 758 aa15.11■□□□□ 0.01
NUP54-217ENST00000514987 TUBB3Q13509 450 aa15.11■□□□□ 0.01
NUP54-217ENST00000514987 OLIG2Q13516 323 aa15.11■□□□□ 0.01
NUP54-217ENST00000514987 FSCBQ5H9T9 825 aa15.11■□□□□ 0.01
NUP54-217ENST00000514987 MSANTD2Q6P1R3 559 aa15.11■□□□□ 0.01
NUP54-217ENST00000514987 NET1Q7Z628 596 aaPredicted RBP15.11■□□□□ 0.01
NUP54-217ENST00000514987 CMC1Q7Z7K0 106 aa15.11■□□□□ 0.01
NUP54-217ENST00000514987 MON1AQ86VX9 555 aa15.11■□□□□ 0.01
NUP54-217ENST00000514987 TREML1Q86YW5 311 aa15.11■□□□□ 0.01
NUP54-217ENST00000514987 CNTN4Q8IWV2 1026 aa15.11■□□□□ 0.01
NUP54-217ENST00000514987 RTL3Q8N8U3 475 aaKnown RBP15.11■□□□□ 0.01
NUP54-217ENST00000514987 MAB21L3Q8N8X9 362 aa15.11■□□□□ 0.01
NUP54-217ENST00000514987 SCAMP5Q8TAC9 235 aa15.11■□□□□ 0.01
NUP54-217ENST00000514987 N4BP2L2Q92802 583 aaPredicted RBP15.11■□□□□ 0.01
NUP54-217ENST00000514987 FCRL2Q96LA5 508 aaPredicted RBP15.11■□□□□ 0.01
NUP54-217ENST00000514987 C8orf48Q96LL4 319 aa15.11■□□□□ 0.01
NUP54-217ENST00000514987 ZNF778Q96MU6 729 aa15.11■□□□□ 0.01
NUP54-217ENST00000514987 SORT1Q99523 831 aa15.11■□□□□ 0.01
NUP54-217ENST00000514987 PRKD2Q9BZL6 878 aa15.11■□□□□ 0.01
NUP54-217ENST00000514987 UBE2OQ9C0C9 1292 aaKnown RBP15.11■□□□□ 0.01
NUP54-217ENST00000514987 RGS18Q9NS28 235 aa15.11■□□□□ 0.01
NUP54-217ENST00000514987 TBC1D13Q9NVG8 400 aa15.11■□□□□ 0.01
NUP54-217ENST00000514987 SCML2Q9UQR0 700 aa15.11■□□□□ 0.01
NUP54-217ENST00000514987 KCNU1A8MYU2 1149 aa15.1■□□□□ 0.01
NUP54-217ENST00000514987 LYPLA1O75608 230 aaPredicted RBP15.1■□□□□ 0.01
NUP54-217ENST00000514987 NEBLO76041 1014 aa15.1■□□□□ 0.01
NUP54-217ENST00000514987 TM7SF2O76062 418 aa15.1■□□□□ 0.01
NUP54-217ENST00000514987 SNUPNO95149 360 aaKnown RBP15.1■□□□□ 0.01
NUP54-217ENST00000514987 HSPA4LO95757 839 aa15.1■□□□□ 0.01
NUP54-217ENST00000514987 TPH1P17752 444 aa15.1■□□□□ 0.01
NUP54-217ENST00000514987 NMBRP28336 390 aa15.1■□□□□ 0.01
NUP54-217ENST00000514987 IDH3AP50213 366 aa15.1■□□□□ 0.01
NUP54-217ENST00000514987 CSRP3P50461 194 aa15.1■□□□□ 0.01
NUP54-217ENST00000514987 CACNB2Q08289 660 aaPredicted RBP15.1■□□□□ 0.01
NUP54-217ENST00000514987 ILF2Q12905 390 aaKnown RBP15.1■□□□□ 0.01
NUP54-217ENST00000514987 ITGA9Q13797 1035 aa15.1■□□□□ 0.01
NUP54-217ENST00000514987 CCDC6Q16204 474 aa15.1■□□□□ 0.01
NUP54-217ENST00000514987 TRIM71Q2Q1W2 868 aaKnown RBP15.1■□□□□ 0.01
NUP54-217ENST00000514987 TSNAXIP1Q2TAA8 658 aa15.1■□□□□ 0.01
NUP54-217ENST00000514987 TRMT5Q32P41 509 aaKnown RBP15.1■□□□□ 0.01
NUP54-217ENST00000514987 RABGAP1LQ5R372 815 aa15.1■□□□□ 0.01
NUP54-217ENST00000514987 CCSAPQ6IQ19 270 aaPredicted RBP15.1■□□□□ 0.01
NUP54-217ENST00000514987 RFWD3Q6PCD5 774 aa15.1■□□□□ 0.01
NUP54-217ENST00000514987 OTOP3Q7RTS5 596 aa15.1■□□□□ 0.01
NUP54-217ENST00000514987 ZC3HC1Q86WB0 502 aaKnown RBP15.1■□□□□ 0.01
NUP54-217ENST00000514987 SCUBE1Q8IWY4 988 aa15.1■□□□□ 0.01
NUP54-217ENST00000514987 TTC8Q8TAM2 541 aa15.1■□□□□ 0.01
NUP54-217ENST00000514987 TMEM209Q96SK2 561 aa15.1■□□□□ 0.01
NUP54-217ENST00000514987 MYCBPQ99417 103 aaPredicted RBP15.1■□□□□ 0.01
NUP54-217ENST00000514987 APOL2Q9BQE5 337 aa15.1■□□□□ 0.01
NUP54-217ENST00000514987 SLC39A8Q9C0K1 460 aa15.1■□□□□ 0.01
NUP54-217ENST00000514987 ZCWPW1Q9H0M4 648 aa15.1■□□□□ 0.01
NUP54-217ENST00000514987 IL1RAPL1Q9NZN1 696 aa15.1■□□□□ 0.01
NUP54-217ENST00000514987 TLR6Q9Y2C9 796 aa15.1■□□□□ 0.01
NUP54-217ENST00000514987 PRR5-ARHGAP8B1AHC4 643 aa15.09■□□□□ 0.01
NUP54-217ENST00000514987 G3V2L1 256 aa15.09■□□□□ 0.01
NUP54-217ENST00000514987 SIN3BO75182 1162 aa15.09■□□□□ 0.01
NUP54-217ENST00000514987 ALDH1A1P00352 501 aa15.09■□□□□ 0.01
NUP54-217ENST00000514987 RPSAP08865 295 aaKnown RBP15.09■□□□□ 0.01
NUP54-217ENST00000514987 YY1P25490 414 aa15.09■□□□□ 0.01
NUP54-217ENST00000514987 CRABP2P29373 138 aa15.09■□□□□ 0.01
NUP54-217ENST00000514987 PRDX6P30041 224 aa15.09■□□□□ 0.01
NUP54-217ENST00000514987 TUBP50607 506 aa15.09■□□□□ 0.01
NUP54-217ENST00000514987 KPNA2P52292 529 aaKnown RBP15.09■□□□□ 0.01
NUP54-217ENST00000514987 NDST2P52849 883 aa15.09■□□□□ 0.01
NUP54-217ENST00000514987 MLLT6P55198 1093 aaPredicted RBP15.09■□□□□ 0.01
NUP54-217ENST00000514987 ARHGAP8P85298 464 aa15.09■□□□□ 0.01
NUP54-217ENST00000514987 SLC12A1Q13621 1099 aa15.09■□□□□ 0.01
NUP54-217ENST00000514987 RCN2Q14257 317 aa15.09■□□□□ 0.01
NUP54-217ENST00000514987 KPNB1Q14974 876 aaKnown RBP15.09■□□□□ 0.01
NUP54-217ENST00000514987 TAF11Q15544 211 aa15.09■□□□□ 0.01
NUP54-217ENST00000514987 KHDC1Q4VXA5 237 aaKnown RBP15.09■□□□□ 0.01
NUP54-217ENST00000514987 CFAP157Q5JU67 520 aa15.09■□□□□ 0.01
NUP54-217ENST00000514987 ZYG11AQ6WRX3 759 aa15.09■□□□□ 0.01
NUP54-217ENST00000514987 RAPH1Q70E73 1250 aa15.09■□□□□ 0.01
NUP54-217ENST00000514987 SCD5Q86SK9 330 aa15.09■□□□□ 0.01
NUP54-217ENST00000514987 NUP93Q8N1F7 819 aa15.09■□□□□ 0.01
NUP54-217ENST00000514987 RBM15BQ8NDT2 890 aaKnown RBP15.09■□□□□ 0.01
NUP54-217ENST00000514987 USP33Q8TEY7 942 aa15.09■□□□□ 0.01
NUP54-217ENST00000514987 HASPINQ8TF76 798 aa15.09■□□□□ 0.01
NUP54-217ENST00000514987 CASP10Q92851 521 aa15.09■□□□□ 0.01
NUP54-217ENST00000514987 CMTM5Q96DZ9 223 aa15.09■□□□□ 0.01
NUP54-217ENST00000514987 EBF4Q9BQW3 602 aa15.09■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms