RNA–Protein interactions for RNA: ENST00000514610.1

HMGCS1-207, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 2

Gene HMGCS1, Length 555 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-207ENST00000514610 CD4P01730 458 aa5.55□□□□□ -1.52
HMGCS1-207ENST00000514610 FBLP22087 321 aaKnown RBP5.55□□□□□ -1.52
HMGCS1-207ENST00000514610 ABCD3P28288 659 aa5.55□□□□□ -1.52
HMGCS1-207ENST00000514610 C21orf58P58505 322 aa5.55□□□□□ -1.52
HMGCS1-207ENST00000514610 SSBP2P81877 361 aaPredicted RBP5.55□□□□□ -1.52
HMGCS1-207ENST00000514610 PMPCAQ10713 525 aa5.55□□□□□ -1.52
HMGCS1-207ENST00000514610 GPR68Q15743 365 aa5.55□□□□□ -1.52
HMGCS1-207ENST00000514610 RPE65Q16518 533 aa5.55□□□□□ -1.52
HMGCS1-207ENST00000514610 PRICKLE4Q2TBC4 344 aa5.55□□□□□ -1.52
HMGCS1-207ENST00000514610 ZNF667Q5HYK9 610 aa5.55□□□□□ -1.52
HMGCS1-207ENST00000514610 ENTPD8Q5MY95 495 aa5.55□□□□□ -1.52
HMGCS1-207ENST00000514610 TBC1D9BQ66K14 1250 aa5.55□□□□□ -1.52
HMGCS1-207ENST00000514610 TCP11L2Q8N4U5 519 aa5.55□□□□□ -1.52
HMGCS1-207ENST00000514610 CNOT9Q92600 299 aaKnown RBP5.55□□□□□ -1.52
HMGCS1-207ENST00000514610 SH3KBP1Q96B97 665 aa5.55□□□□□ -1.52
HMGCS1-207ENST00000514610 MSI2Q96DH6 328 aaKnown RBP5.55□□□□□ -1.52
HMGCS1-207ENST00000514610 APOPT1Q96IL0 206 aa5.55□□□□□ -1.52
HMGCS1-207ENST00000514610 CLMNQ96JQ2 1002 aa5.55□□□□□ -1.52
HMGCS1-207ENST00000514610 INTS2Q9H0H0 1204 aaKnown RBP5.55□□□□□ -1.52
HMGCS1-207ENST00000514610 THSD1Q9NS62 852 aa5.55□□□□□ -1.52
HMGCS1-207ENST00000514610 SLC25A10Q9UBX3 287 aaPredicted RBP5.55□□□□□ -1.52
HMGCS1-207ENST00000514610 TRBV5-7A0A0A0MS05 114 aa5.54□□□□□ -1.52
HMGCS1-207ENST00000514610 TMEM247A6NEH6 219 aa5.54□□□□□ -1.52
HMGCS1-207ENST00000514610 TLX3O43711 291 aaPredicted RBP5.54□□□□□ -1.52
HMGCS1-207ENST00000514610 STRNO43815 780 aa5.54□□□□□ -1.52
HMGCS1-207ENST00000514610 CBX6O95503 412 aa5.54□□□□□ -1.52
HMGCS1-207ENST00000514610 ADAP00813 363 aa5.54□□□□□ -1.52
HMGCS1-207ENST00000514610 URODP06132 367 aa5.54□□□□□ -1.52
HMGCS1-207ENST00000514610 CHRM4P08173 479 aa5.54□□□□□ -1.52
HMGCS1-207ENST00000514610 TNFAIP3P21580 790 aa5.54□□□□□ -1.52
HMGCS1-207ENST00000514610 ELF1P32519 619 aa5.54□□□□□ -1.52
HMGCS1-207ENST00000514610 RPP30P78346 268 aaKnown RBP5.54□□□□□ -1.52
HMGCS1-207ENST00000514610 SRSF7Q16629 238 aaKnown RBP eCLIP5.54□□□□□ -1.52
HMGCS1-207ENST00000514610 SMTNL2Q2TAL5 461 aa5.54□□□□□ -1.52
HMGCS1-207ENST00000514610 ZNF766Q5HY98 468 aa5.54□□□□□ -1.52
HMGCS1-207ENST00000514610 MTX3Q5HYI7 312 aa5.54□□□□□ -1.52
HMGCS1-207ENST00000514610 ISM2Q6H9L7 571 aa5.54□□□□□ -1.52
HMGCS1-207ENST00000514610 ACAD10Q6JQN1 1059 aa5.54□□□□□ -1.52
HMGCS1-207ENST00000514610 C17orf99Q6UX52 265 aa5.54□□□□□ -1.52
HMGCS1-207ENST00000514610 H1FNTQ75WM6 255 aaPredicted RBP5.54□□□□□ -1.52
HMGCS1-207ENST00000514610 KDELC2Q7Z4H8 507 aa5.54□□□□□ -1.52
HMGCS1-207ENST00000514610 TSPYL6Q8N831 410 aa5.54□□□□□ -1.52
HMGCS1-207ENST00000514610 HDAC7Q8WUI4 952 aa5.54□□□□□ -1.52
HMGCS1-207ENST00000514610 FAR1Q8WVX9 515 aa5.54□□□□□ -1.52
HMGCS1-207ENST00000514610 CUL5Q93034 780 aa5.54□□□□□ -1.52
HMGCS1-207ENST00000514610 ZNF419Q96HQ0 510 aaPredicted RBP5.54□□□□□ -1.52
HMGCS1-207ENST00000514610 SLC32A1Q9H598 525 aa5.54□□□□□ -1.52
HMGCS1-207ENST00000514610 ACTR5Q9H9F9 607 aaPredicted RBP5.54□□□□□ -1.52
HMGCS1-207ENST00000514610 JMJD4Q9H9V9 463 aa5.54□□□□□ -1.52
HMGCS1-207ENST00000514610 PREBQ9HCU5 417 aa5.54□□□□□ -1.52
HMGCS1-207ENST00000514610 ZDHHC7Q9NXF8 308 aa5.54□□□□□ -1.52
HMGCS1-207ENST00000514610 MSRB1Q9NZV6 116 aa5.54□□□□□ -1.52
HMGCS1-207ENST00000514610 ZSCAN21Q9Y5A6 473 aaPredicted RBP5.54□□□□□ -1.52
HMGCS1-207ENST00000514610 ZNF335Q9H4Z2 1342 aaPredicted RBP5.53□□□□□ -1.52
HMGCS1-207ENST00000514610 A6NNC1 897 aa5.53□□□□□ -1.52
HMGCS1-207ENST00000514610 ZNF814B7Z6K7 855 aa5.53□□□□□ -1.52
HMGCS1-207ENST00000514610 OVOL3O00110 214 aa5.53□□□□□ -1.52
HMGCS1-207ENST00000514610 TNPO2O14787 897 aaKnown RBP5.53□□□□□ -1.52
HMGCS1-207ENST00000514610 PPFIA2O75334 1257 aa5.53□□□□□ -1.52
HMGCS1-207ENST00000514610 GUCY1B2O75343 617 aa5.53□□□□□ -1.52
HMGCS1-207ENST00000514610 F9P00740 461 aa5.53□□□□□ -1.52
HMGCS1-207ENST00000514610 LCKP06239 509 aa5.53□□□□□ -1.52
HMGCS1-207ENST00000514610 GPD2P43304 727 aa5.53□□□□□ -1.52
HMGCS1-207ENST00000514610 CDH15P55291 814 aa5.53□□□□□ -1.52
HMGCS1-207ENST00000514610 EZH2Q15910 746 aaKnown RBP5.53□□□□□ -1.52
HMGCS1-207ENST00000514610 SYTL3Q4VX76 610 aa5.53□□□□□ -1.52
HMGCS1-207ENST00000514610 PIK3CD-AS1Q5SR53 167 aa5.53□□□□□ -1.52
HMGCS1-207ENST00000514610 TTC39AQ5SRH9 613 aa5.53□□□□□ -1.52
HMGCS1-207ENST00000514610 B4GALNT4Q76KP1 1039 aa5.53□□□□□ -1.52
HMGCS1-207ENST00000514610 PIP4P1Q86T03 277 aa5.53□□□□□ -1.52
HMGCS1-207ENST00000514610 WDR5BQ86VZ2 330 aa5.53□□□□□ -1.52
HMGCS1-207ENST00000514610 PLD5Q8N7P1 536 aa5.53□□□□□ -1.52
HMGCS1-207ENST00000514610 ZNF366Q8N895 744 aa5.53□□□□□ -1.52
HMGCS1-207ENST00000514610 CMASQ8NFW8 434 aaPredicted RBP5.53□□□□□ -1.52
HMGCS1-207ENST00000514610 HSPH1Q92598 858 aa5.53□□□□□ -1.52
HMGCS1-207ENST00000514610 COQ8BQ96D53 544 aa5.53□□□□□ -1.52
HMGCS1-207ENST00000514610 TEFMQ96QE5 360 aaKnown RBP5.53□□□□□ -1.52
HMGCS1-207ENST00000514610 MPHOSPH8Q99549 860 aa5.53□□□□□ -1.52
HMGCS1-207ENST00000514610 TUBB6Q9BUF5 446 aa5.53□□□□□ -1.52
HMGCS1-207ENST00000514610 IFT27Q9BW83 186 aa5.53□□□□□ -1.52
HMGCS1-207ENST00000514610 ATP8A2Q9NTI2 1148 aa5.53□□□□□ -1.52
HMGCS1-207ENST00000514610 BEX4Q9NWD9 120 aaPredicted RBP5.53□□□□□ -1.52
HMGCS1-207ENST00000514610 GRHL1Q9NZI5 618 aa5.53□□□□□ -1.52
HMGCS1-207ENST00000514610 PLEKHB1Q9UF11 243 aaPredicted RBP5.53□□□□□ -1.52
HMGCS1-207ENST00000514610 DHDHQ9UQ10 334 aa5.53□□□□□ -1.52
HMGCS1-207ENST00000514610 CLDN16Q9Y5I7 305 aa5.53□□□□□ -1.52
HMGCS1-207ENST00000514610 MST1RQ04912 1400 aa5.53□□□□□ -1.52
HMGCS1-207ENST00000514610 GOLGA6L10A0A0M3HER8 536 aa5.52□□□□□ -1.53
HMGCS1-207ENST00000514610 B4E171 279 aa5.52□□□□□ -1.53
HMGCS1-207ENST00000514610 PRPF4O43172 522 aaKnown RBP eCLIP5.52□□□□□ -1.53
HMGCS1-207ENST00000514610 CEP104O60308 925 aa5.52□□□□□ -1.53
HMGCS1-207ENST00000514610 MBD4O95243 580 aa5.52□□□□□ -1.53
HMGCS1-207ENST00000514610 TBX18O95935 607 aa5.52□□□□□ -1.53
HMGCS1-207ENST00000514610 TSPAN7P41732 249 aa5.52□□□□□ -1.53
HMGCS1-207ENST00000514610 SKIV2L2P42285 1042 aaKnown RBP5.52□□□□□ -1.53
HMGCS1-207ENST00000514610 DDX10Q13206 875 aaKnown RBP5.52□□□□□ -1.53
HMGCS1-207ENST00000514610 MTX1Q13505 466 aa5.52□□□□□ -1.53
HMGCS1-207ENST00000514610 CAMK1Q14012 370 aa5.52□□□□□ -1.53
HMGCS1-207ENST00000514610 ME3Q16798 604 aa5.52□□□□□ -1.53
HMGCS1-207ENST00000514610 ALG10Q5BKT4 473 aa5.52□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms