RNA–Protein interactions for RNA: ENST00000514344.5

CHD1-211, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 5

Gene CHD1, Length 2,955 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-211ENST00000514344 ANKUB1A6NFN9 424 aa3.35□□□□□ -1.87
CHD1-211ENST00000514344 LRRTM2O43300 516 aa3.35□□□□□ -1.87
CHD1-211ENST00000514344 TBL1XO60907 577 aa3.35□□□□□ -1.87
CHD1-211ENST00000514344 CST3P01034 146 aaPredicted RBP3.35□□□□□ -1.87
CHD1-211ENST00000514344 FURINP09958 794 aa3.35□□□□□ -1.87
CHD1-211ENST00000514344 FGF3P11487 239 aaPredicted RBP3.35□□□□□ -1.87
CHD1-211ENST00000514344 TSHRP16473 764 aa3.35□□□□□ -1.87
CHD1-211ENST00000514344 ADORA2BP29275 332 aa3.35□□□□□ -1.87
CHD1-211ENST00000514344 PRRC2AP48634 2157 aaKnown RBP3.35□□□□□ -1.87
CHD1-211ENST00000514344 EVCP57679 992 aa3.35□□□□□ -1.87
CHD1-211ENST00000514344 TNNC1P63316 161 aa3.35□□□□□ -1.87
CHD1-211ENST00000514344 ZFP36L1Q07352 338 aaKnown RBP3.35□□□□□ -1.87
CHD1-211ENST00000514344 ELOAQ14241 798 aaKnown RBP3.35□□□□□ -1.87
CHD1-211ENST00000514344 BMT2Q1RMZ1 405 aa3.35□□□□□ -1.87
CHD1-211ENST00000514344 AMZ1Q400G9 498 aa3.35□□□□□ -1.87
CHD1-211ENST00000514344 ACCSLQ4AC99 568 aa3.35□□□□□ -1.87
CHD1-211ENST00000514344 ARSHQ5FYA8 562 aa3.35□□□□□ -1.87
CHD1-211ENST00000514344 RNF219Q5W0B1 726 aaPredicted RBP3.35□□□□□ -1.87
CHD1-211ENST00000514344 SLFN12LQ6IEE8 588 aa3.35□□□□□ -1.87
CHD1-211ENST00000514344 KLHDC10Q6PID8 442 aa3.35□□□□□ -1.87
CHD1-211ENST00000514344 SCARA5Q6ZMJ2 495 aa3.35□□□□□ -1.87
CHD1-211ENST00000514344 CCNJLQ8IV13 435 aa3.35□□□□□ -1.87
CHD1-211ENST00000514344 BRSK2Q8IWQ3 736 aa3.35□□□□□ -1.87
CHD1-211ENST00000514344 NRSN1Q8IZ57 195 aa3.35□□□□□ -1.87
CHD1-211ENST00000514344 CPXM2Q8N436 756 aa3.35□□□□□ -1.87
CHD1-211ENST00000514344 ANKRD36BP1Q96IX9 119 aa3.35□□□□□ -1.87
CHD1-211ENST00000514344 MRGPRX3Q96LB0 322 aa3.35□□□□□ -1.87
CHD1-211ENST00000514344 LRRC61Q9BV99 259 aa3.35□□□□□ -1.87
CHD1-211ENST00000514344 TIPINQ9BVW5 301 aa3.35□□□□□ -1.87
CHD1-211ENST00000514344 TRIM55Q9BYV6 548 aa3.35□□□□□ -1.87
CHD1-211ENST00000514344 DCLK3Q9C098 648 aa3.35□□□□□ -1.87
CHD1-211ENST00000514344 GSX1Q9H4S2 264 aaPredicted RBP3.35□□□□□ -1.87
CHD1-211ENST00000514344 PARVGQ9HBI0 331 aa3.35□□□□□ -1.87
CHD1-211ENST00000514344 PNMA8BQ9ULN7 279 aaPredicted RBP3.35□□□□□ -1.87
CHD1-211ENST00000514344 PCDHB3Q9Y5E6 796 aa3.35□□□□□ -1.87
CHD1-211ENST00000514344 CSNK1G3Q9Y6M4 447 aa3.35□□□□□ -1.87
CHD1-211ENST00000514344 ATP8B3O60423 1300 aa3.35□□□□□ -1.87
CHD1-211ENST00000514344 MYO7BQ6PIF6 2116 aa3.35□□□□□ -1.87
CHD1-211ENST00000514344 TMEM200CA6NKL6 621 aa3.35□□□□□ -1.87
CHD1-211ENST00000514344 LMO7DNF2Z398 122 aa3.35□□□□□ -1.87
CHD1-211ENST00000514344 TPP1O14773 563 aa3.35□□□□□ -1.87
CHD1-211ENST00000514344 RFPL1O75677 317 aa3.35□□□□□ -1.87
CHD1-211ENST00000514344 CDKL5O76039 1030 aa3.35□□□□□ -1.87
CHD1-211ENST00000514344 SORBS2O94875 1100 aaKnown RBP3.35□□□□□ -1.87
CHD1-211ENST00000514344 KRT18P05783 430 aaKnown RBP3.35□□□□□ -1.87
CHD1-211ENST00000514344 CD99P14209 185 aa3.35□□□□□ -1.87
CHD1-211ENST00000514344 MPSTP25325 297 aa3.35□□□□□ -1.87
CHD1-211ENST00000514344 NUDT1P36639 197 aa3.35□□□□□ -1.87
CHD1-211ENST00000514344 NDST1P52848 882 aa3.35□□□□□ -1.87
CHD1-211ENST00000514344 SLC12A3P55017 1021 aa3.35□□□□□ -1.87
CHD1-211ENST00000514344 RNASE9P60153 205 aaKnown RBP3.35□□□□□ -1.87
CHD1-211ENST00000514344 CDK18Q07002 472 aa3.35□□□□□ -1.87
CHD1-211ENST00000514344 ZNF284Q2VY69 593 aa3.35□□□□□ -1.87
CHD1-211ENST00000514344 FSCBQ5H9T9 825 aa3.35□□□□□ -1.87
CHD1-211ENST00000514344 LIMS2Q7Z4I7 341 aa3.35□□□□□ -1.87
CHD1-211ENST00000514344 ABI3BPQ7Z7G0 1075 aa3.35□□□□□ -1.87
CHD1-211ENST00000514344 SCD5Q86SK9 330 aa3.35□□□□□ -1.87
CHD1-211ENST00000514344 CDH24Q86UP0 819 aa3.35□□□□□ -1.87
CHD1-211ENST00000514344 SFTPA2Q8IWL1 248 aa3.35□□□□□ -1.87
CHD1-211ENST00000514344 ARL10Q8N8L6 244 aa3.35□□□□□ -1.87
CHD1-211ENST00000514344 LRRN4CLQ8ND94 238 aa3.35□□□□□ -1.87
CHD1-211ENST00000514344 IFT43Q96FT9 208 aa3.35□□□□□ -1.87
CHD1-211ENST00000514344 CTRCQ99895 268 aa3.35□□□□□ -1.87
CHD1-211ENST00000514344 SLC13A1Q9BZW2 595 aa3.35□□□□□ -1.87
CHD1-211ENST00000514344 CLPBQ9H078 707 aa3.35□□□□□ -1.87
CHD1-211ENST00000514344 ASF1BQ9NVP2 202 aa3.35□□□□□ -1.87
CHD1-211ENST00000514344 AKAP7Q9P0M2 348 aaPredicted RBP3.35□□□□□ -1.87
CHD1-211ENST00000514344 RCOR3Q9P2K3 495 aaPredicted RBP3.35□□□□□ -1.87
CHD1-211ENST00000514344 SPASTQ9UBP0 616 aa3.35□□□□□ -1.87
CHD1-211ENST00000514344 PILRAQ9UKJ1 303 aa3.35□□□□□ -1.87
CHD1-211ENST00000514344 ERVW-1Q9UQF0 538 aa3.35□□□□□ -1.87
CHD1-211ENST00000514344 SCML2Q9UQR0 700 aa3.35□□□□□ -1.87
CHD1-211ENST00000514344 KIF3AQ9Y496 699 aa3.35□□□□□ -1.87
CHD1-211ENST00000514344 NYNRINQ9P2P1 1898 aaKnown RBP3.35□□□□□ -1.87
CHD1-211ENST00000514344 ITIH6Q6UXX5 1313 aa3.34□□□□□ -1.87
CHD1-211ENST00000514344 AKAP6Q13023 2319 aa3.34□□□□□ -1.87
CHD1-211ENST00000514344 GOLGA6L7A0A1B0GV03 622 aa3.34□□□□□ -1.87
CHD1-211ENST00000514344 HEATR9A2RTY3 570 aa3.34□□□□□ -1.87
CHD1-211ENST00000514344 KIAA1324LA8MWY0 1029 aaPredicted RBP3.34□□□□□ -1.87
CHD1-211ENST00000514344 RAD51BO15315 384 aa3.34□□□□□ -1.87
CHD1-211ENST00000514344 CAPN5O15484 640 aaPredicted RBP3.34□□□□□ -1.87
CHD1-211ENST00000514344 PRICKLE3O43900 615 aaPredicted RBP3.34□□□□□ -1.87
CHD1-211ENST00000514344 CBX6O95503 412 aa3.34□□□□□ -1.87
CHD1-211ENST00000514344 TNNC2P02585 160 aa3.34□□□□□ -1.87
CHD1-211ENST00000514344 DLATP10515 647 aaKnown RBP3.34□□□□□ -1.87
CHD1-211ENST00000514344 RALAP11233 206 aa3.34□□□□□ -1.87
CHD1-211ENST00000514344 ZNF18P17022 549 aa3.34□□□□□ -1.87
CHD1-211ENST00000514344 FECHP22830 423 aa3.34□□□□□ -1.87
CHD1-211ENST00000514344 ECT2LQ008S8 904 aa3.34□□□□□ -1.87
CHD1-211ENST00000514344 CHAF1BQ13112 559 aa3.34□□□□□ -1.87
CHD1-211ENST00000514344 EIF2B5Q13144 721 aaKnown RBP3.34□□□□□ -1.87
CHD1-211ENST00000514344 CDH18Q13634 790 aa3.34□□□□□ -1.87
CHD1-211ENST00000514344 C14orf28Q4W4Y0 310 aa3.34□□□□□ -1.87
CHD1-211ENST00000514344 EFHC2Q5JST6 749 aa3.34□□□□□ -1.87
CHD1-211ENST00000514344 FAXCQ5TGI0 409 aa3.34□□□□□ -1.87
CHD1-211ENST00000514344 ANKS6Q68DC2 871 aa3.34□□□□□ -1.87
CHD1-211ENST00000514344 ZNF517Q6ZMY9 492 aaPredicted RBP3.34□□□□□ -1.87
CHD1-211ENST00000514344 RD3Q7Z3Z2 195 aa3.34□□□□□ -1.87
CHD1-211ENST00000514344 KIAA0907Q7Z7F0 614 aaPredicted RBP3.34□□□□□ -1.87
CHD1-211ENST00000514344 GPBP1Q86WP2 473 aa3.34□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms