RNA–Protein interactions for RNA: ENST00000513868.6

PVT1-203, Transcript of Pvt1 oncogene, humanhuman

TSL 1 (best) BASIC

Gene PVT1, Length 1,699 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-203ENST00000513868 KBTBD12Q3ZCT8 623 aa13.09□□□□□ -0.31
PVT1-203ENST00000513868 TTC19Q6DKK2 380 aaPredicted RBP13.09□□□□□ -0.31
PVT1-203ENST00000513868 TRMT10BQ6PF06 316 aaKnown RBP13.09□□□□□ -0.31
PVT1-203ENST00000513868 MAB21L3Q8N8X9 362 aa13.09□□□□□ -0.31
PVT1-203ENST00000513868 MZB1Q8WU39 189 aa13.09□□□□□ -0.31
PVT1-203ENST00000513868 STAMBPL1Q96FJ0 436 aa13.09□□□□□ -0.31
PVT1-203ENST00000513868 CYTH2Q99418 400 aa13.09□□□□□ -0.31
PVT1-203ENST00000513868 PAFAH2Q99487 392 aa13.09□□□□□ -0.31
PVT1-203ENST00000513868 CAPS2Q9BXY5 557 aa13.09□□□□□ -0.31
PVT1-203ENST00000513868 PDFQ9HBH1 243 aa13.09□□□□□ -0.31
PVT1-203ENST00000513868 SMYD2Q9NRG4 433 aa13.09□□□□□ -0.31
PVT1-203ENST00000513868 HCFC1R1Q9NWW0 138 aa13.09□□□□□ -0.31
PVT1-203ENST00000513868 SYBUQ9NX95 663 aa13.09□□□□□ -0.31
PVT1-203ENST00000513868 MOCS1Q9NZB8 636 aa13.09□□□□□ -0.31
PVT1-203ENST00000513868 CPQQ9Y646 472 aa13.09□□□□□ -0.31
PVT1-203ENST00000513868 MAD1L1Q9Y6D9 718 aa13.09□□□□□ -0.31
PVT1-203ENST00000513868 C2orf16Q68DN1 1984 aa13.09□□□□□ -0.31
PVT1-203ENST00000513868 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP13.08□□□□□ -0.31
PVT1-203ENST00000513868 A0A1W2PRU2 124 aa13.08□□□□□ -0.31
PVT1-203ENST00000513868 CXorf49A8MYA2 514 aaPredicted RBP13.08□□□□□ -0.31
PVT1-203ENST00000513868 PRAMEF11O60813 436 aa13.08□□□□□ -0.31
PVT1-203ENST00000513868 ALDH1A2O94788 518 aa13.08□□□□□ -0.31
PVT1-203ENST00000513868 HOXD9P28356 352 aaPredicted RBP13.08□□□□□ -0.31
PVT1-203ENST00000513868 ATP5DP30049 168 aa13.08□□□□□ -0.31
PVT1-203ENST00000513868 ADRA1AP35348 466 aa13.08□□□□□ -0.31
PVT1-203ENST00000513868 RENBPP51606 427 aa13.08□□□□□ -0.31
PVT1-203ENST00000513868 EPHA5P54756 1037 aa13.08□□□□□ -0.31
PVT1-203ENST00000513868 SLC7A9P82251 487 aa13.08□□□□□ -0.31
PVT1-203ENST00000513868 PRPSAP1Q14558 356 aa13.08□□□□□ -0.31
PVT1-203ENST00000513868 TMED2Q15363 201 aa13.08□□□□□ -0.31
PVT1-203ENST00000513868 RABGAP1LQ5R372 815 aa13.08□□□□□ -0.31
PVT1-203ENST00000513868 STXBP5Q5T5C0 1151 aa13.08□□□□□ -0.31
PVT1-203ENST00000513868 CYS1Q717R9 158 aa13.08□□□□□ -0.31
PVT1-203ENST00000513868 CHST9Q7L1S5 443 aa13.08□□□□□ -0.31
PVT1-203ENST00000513868 TRABD2AQ86V40 505 aa13.08□□□□□ -0.31
PVT1-203ENST00000513868 FAM217AQ8IXS0 508 aa13.08□□□□□ -0.31
PVT1-203ENST00000513868 PGBD5Q8N414 524 aa13.08□□□□□ -0.31
PVT1-203ENST00000513868 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP13.08□□□□□ -0.31
PVT1-203ENST00000513868 GSDMBQ8TAX9 411 aa13.08□□□□□ -0.31
PVT1-203ENST00000513868 MDM1Q8TC05 714 aa13.08□□□□□ -0.31
PVT1-203ENST00000513868 SLC44A1Q8WWI5 657 aa13.08□□□□□ -0.31
PVT1-203ENST00000513868 MRPS31Q92665 395 aaKnown RBP13.08□□□□□ -0.31
PVT1-203ENST00000513868 MRRFQ96E11 262 aaKnown RBP13.08□□□□□ -0.31
PVT1-203ENST00000513868 LRRC40Q9H9A6 602 aa13.08□□□□□ -0.31
PVT1-203ENST00000513868 SP110Q9HB58 689 aa13.08□□□□□ -0.31
PVT1-203ENST00000513868 AAR2Q9Y312 384 aaKnown RBP13.08□□□□□ -0.31
PVT1-203ENST00000513868 FAM159BA6NKW6 160 aa13.08□□□□□ -0.32
PVT1-203ENST00000513868 SCAMP3O14828 347 aaKnown RBP13.08□□□□□ -0.32
PVT1-203ENST00000513868 PSMD3O43242 534 aa13.08□□□□□ -0.32
PVT1-203ENST00000513868 TSPAN3O60637 253 aa13.08□□□□□ -0.32
PVT1-203ENST00000513868 CLASP2O75122 1294 aaKnown RBP13.08□□□□□ -0.32
PVT1-203ENST00000513868 CLDN11O75508 207 aa13.08□□□□□ -0.32
PVT1-203ENST00000513868 RFPL2O75678 378 aa13.08□□□□□ -0.32
PVT1-203ENST00000513868 ANXA9O76027 345 aa13.08□□□□□ -0.32
PVT1-203ENST00000513868 C1RP00736 705 aa13.08□□□□□ -0.32
PVT1-203ENST00000513868 CA3P07451 260 aa13.08□□□□□ -0.32
PVT1-203ENST00000513868 STX2P32856 288 aa13.08□□□□□ -0.32
PVT1-203ENST00000513868 GNA12Q03113 381 aa13.08□□□□□ -0.32
PVT1-203ENST00000513868 SHHQ15465 462 aa13.08□□□□□ -0.32
PVT1-203ENST00000513868 PPM1LQ5SGD2 360 aa13.08□□□□□ -0.32
PVT1-203ENST00000513868 MARC1Q5VT66 337 aa13.08□□□□□ -0.32
PVT1-203ENST00000513868 DENND5AQ6IQ26 1287 aa13.08□□□□□ -0.32
PVT1-203ENST00000513868 RTL10Q7L3V2 364 aa13.08□□□□□ -0.32
PVT1-203ENST00000513868 TAOK1Q7L7X3 1001 aa13.08□□□□□ -0.32
PVT1-203ENST00000513868 ELMOD1Q8N336 334 aa13.08□□□□□ -0.32
PVT1-203ENST00000513868 OR7D4Q8NG98 312 aa13.08□□□□□ -0.32
PVT1-203ENST00000513868 MICAL1Q8TDZ2 1067 aa13.08□□□□□ -0.32
PVT1-203ENST00000513868 APOL2Q9BQE5 337 aa13.08□□□□□ -0.32
PVT1-203ENST00000513868 CORO1BQ9BR76 489 aa13.08□□□□□ -0.32
PVT1-203ENST00000513868 SLC46A2Q9BY10 475 aa13.08□□□□□ -0.32
PVT1-203ENST00000513868 SLC25A51Q9H1U9 297 aa13.08□□□□□ -0.32
PVT1-203ENST00000513868 MAGEH1Q9H213 219 aa13.08□□□□□ -0.32
PVT1-203ENST00000513868 ATXN3LQ9H3M9 355 aa13.08□□□□□ -0.32
PVT1-203ENST00000513868 CNOT10Q9H9A5 744 aaKnown RBP13.08□□□□□ -0.32
PVT1-203ENST00000513868 PSMC3IPQ9P2W1 217 aaPredicted RBP13.08□□□□□ -0.32
PVT1-203ENST00000513868 TBC1D30Q9Y2I9 924 aa13.08□□□□□ -0.32
PVT1-203ENST00000513868 BPTFQ12830 3046 aa13.08□□□□□ -0.32
PVT1-203ENST00000513868 A0A1B0GVM2 712 aa13.07□□□□□ -0.32
PVT1-203ENST00000513868 TCAF2A6NFQ2 919 aa13.07□□□□□ -0.32
PVT1-203ENST00000513868 MOSPD3O75425 235 aa13.07□□□□□ -0.32
PVT1-203ENST00000513868 MMP2P08253 660 aa13.07□□□□□ -0.32
PVT1-203ENST00000513868 MYL4P12829 197 aa13.07□□□□□ -0.32
PVT1-203ENST00000513868 EPCAMP16422 314 aa13.07□□□□□ -0.32
PVT1-203ENST00000513868 PGAM1P18669 254 aa13.07□□□□□ -0.32
PVT1-203ENST00000513868 CDC25CP30307 473 aa13.07□□□□□ -0.32
PVT1-203ENST00000513868 MSH2P43246 934 aa13.07□□□□□ -0.32
PVT1-203ENST00000513868 NPY2RP49146 381 aa13.07□□□□□ -0.32
PVT1-203ENST00000513868 GNGT1P63211 74 aa13.07□□□□□ -0.32
PVT1-203ENST00000513868 NIPAL4Q0D2K0 466 aa13.07□□□□□ -0.32
PVT1-203ENST00000513868 NR1H3Q13133 447 aa13.07□□□□□ -0.32
PVT1-203ENST00000513868 MPP2Q14168 576 aa13.07□□□□□ -0.32
PVT1-203ENST00000513868 CERCAMQ5T4B2 595 aa13.07□□□□□ -0.32
PVT1-203ENST00000513868 NAPEPLDQ6IQ20 393 aa13.07□□□□□ -0.32
PVT1-203ENST00000513868 CXorf57Q6NSI4 855 aaKnown RBP13.07□□□□□ -0.32
PVT1-203ENST00000513868 KDELC1Q6UW63 502 aa13.07□□□□□ -0.32
PVT1-203ENST00000513868 CCNJLQ8IV13 435 aa13.07□□□□□ -0.32
PVT1-203ENST00000513868 UNC5BQ8IZJ1 945 aa13.07□□□□□ -0.32
PVT1-203ENST00000513868 TADA1Q96BN2 335 aa13.07□□□□□ -0.32
PVT1-203ENST00000513868 PABPC5Q96DU9 382 aaKnown RBP13.07□□□□□ -0.32
PVT1-203ENST00000513868 IMP4Q96G21 291 aaKnown RBP13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms