RNA–Protein interactions for RNA: ENST00000513318.1

HMGXB3-204, Transcript of HMG-box containing 3, humanhuman

TSL 3

Gene HMGXB3, Length 749 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-204ENST00000513318 CIPCQ9C0C6 399 aa7.76□□□□□ -1.17
HMGXB3-204ENST00000513318 KLC2Q9H0B6 622 aa7.76□□□□□ -1.17
HMGXB3-204ENST00000513318 NOL6Q9H6R4 1146 aaKnown RBP7.76□□□□□ -1.17
HMGXB3-204ENST00000513318 LRRC19Q9H756 370 aa7.76□□□□□ -1.17
HMGXB3-204ENST00000513318 FBRSL1Q9HCM7 1045 aaKnown RBP7.76□□□□□ -1.17
HMGXB3-204ENST00000513318 ATP13A1Q9HD20 1204 aa7.76□□□□□ -1.17
HMGXB3-204ENST00000513318 ETNK2Q9NVF9 386 aa7.76□□□□□ -1.17
HMGXB3-204ENST00000513318 ELOVL2Q9NXB9 296 aa7.76□□□□□ -1.17
HMGXB3-204ENST00000513318 SLC25A13Q9UJS0 675 aa7.76□□□□□ -1.17
HMGXB3-204ENST00000513318 HPCAL4Q9UM19 191 aa7.76□□□□□ -1.17
HMGXB3-204ENST00000513318 STARD13Q9Y3M8 1113 aa7.76□□□□□ -1.17
HMGXB3-204ENST00000513318 MFHAS1Q9Y4C4 1052 aa7.76□□□□□ -1.17
HMGXB3-204ENST00000513318 OR51B4Q9Y5P0 310 aa7.76□□□□□ -1.17
HMGXB3-204ENST00000513318 RAD54BQ9Y620 910 aa7.76□□□□□ -1.17
HMGXB3-204ENST00000513318 THADAQ6YHU6 1953 aa7.76□□□□□ -1.17
HMGXB3-204ENST00000513318 NUMA1Q14980 2115 aa7.76□□□□□ -1.17
HMGXB3-204ENST00000513318 RALGAPA1Q6GYQ0 2036 aa7.76□□□□□ -1.17
HMGXB3-204ENST00000513318 TMEM221A6NGB7 291 aa7.75□□□□□ -1.17
HMGXB3-204ENST00000513318 FAM170BA6NMN3 283 aa7.75□□□□□ -1.17
HMGXB3-204ENST00000513318 K7EQS6 105 aa7.75□□□□□ -1.17
HMGXB3-204ENST00000513318 APOC4-APOC2K7ER74 178 aa7.75□□□□□ -1.17
HMGXB3-204ENST00000513318 M0R296 226 aa7.75□□□□□ -1.17
HMGXB3-204ENST00000513318 KCNK3O14649 394 aa7.75□□□□□ -1.17
HMGXB3-204ENST00000513318 ENC1O14682 589 aa7.75□□□□□ -1.17
HMGXB3-204ENST00000513318 CST8O60676 142 aa7.75□□□□□ -1.17
HMGXB3-204ENST00000513318 TJP3O95049 919 aa7.75□□□□□ -1.17
HMGXB3-204ENST00000513318 APOC2P02655 101 aa7.75□□□□□ -1.17
HMGXB3-204ENST00000513318 ATP1A1P05023 1023 aaKnown RBP7.75□□□□□ -1.17
HMGXB3-204ENST00000513318 SRPRAP08240 638 aaKnown RBP7.75□□□□□ -1.17
HMGXB3-204ENST00000513318 KRT10P13645 584 aa7.75□□□□□ -1.17
HMGXB3-204ENST00000513318 HNRNPLP14866 589 aaKnown RBP eCLIP7.75□□□□□ -1.17
HMGXB3-204ENST00000513318 MX2P20592 715 aa7.75□□□□□ -1.17
HMGXB3-204ENST00000513318 ACVRL1P37023 503 aa7.75□□□□□ -1.17
HMGXB3-204ENST00000513318 NNMTP40261 264 aa7.75□□□□□ -1.17
HMGXB3-204ENST00000513318 KIR2DL1P43626 348 aaPredicted RBP7.75□□□□□ -1.17
HMGXB3-204ENST00000513318 RPS9P46781 194 aaKnown RBP7.75□□□□□ -1.17
HMGXB3-204ENST00000513318 ST8SIA6P61647 398 aa7.75□□□□□ -1.17
HMGXB3-204ENST00000513318 ETF1P62495 437 aaKnown RBP7.75□□□□□ -1.17
HMGXB3-204ENST00000513318 DYNLT1P63172 113 aa7.75□□□□□ -1.17
HMGXB3-204ENST00000513318 ECT2LQ008S8 904 aa7.75□□□□□ -1.17
HMGXB3-204ENST00000513318 GALNT2Q10471 571 aa7.75□□□□□ -1.17
HMGXB3-204ENST00000513318 ZNF211Q13398 564 aaPredicted RBP7.75□□□□□ -1.17
HMGXB3-204ENST00000513318 SERINC3Q13530 473 aa7.75□□□□□ -1.17
HMGXB3-204ENST00000513318 IL31Q6EBC2 164 aa7.75□□□□□ -1.17
HMGXB3-204ENST00000513318 RETSATQ6NUM9 610 aa7.75□□□□□ -1.17
HMGXB3-204ENST00000513318 BZW1Q7L1Q6 419 aaKnown RBP7.75□□□□□ -1.17
HMGXB3-204ENST00000513318 ZSCAN30Q86W11 494 aa7.75□□□□□ -1.17
HMGXB3-204ENST00000513318 LRRC49Q8IUZ0 686 aa7.75□□□□□ -1.17
HMGXB3-204ENST00000513318 SFTPA1Q8IWL2 248 aa7.75□□□□□ -1.17
HMGXB3-204ENST00000513318 CCDC105Q8IYK2 499 aa7.75□□□□□ -1.17
HMGXB3-204ENST00000513318 ATPAF2Q8N5M1 289 aa7.75□□□□□ -1.17
HMGXB3-204ENST00000513318 KDM1BQ8NB78 822 aa7.75□□□□□ -1.17
HMGXB3-204ENST00000513318 FLCNQ8NFG4 579 aa7.75□□□□□ -1.17
HMGXB3-204ENST00000513318 PRR7Q8TB68 274 aa7.75□□□□□ -1.17
HMGXB3-204ENST00000513318 P3H4Q92791 437 aa7.75□□□□□ -1.17
HMGXB3-204ENST00000513318 TTC17Q96AE7 1141 aa7.75□□□□□ -1.17
HMGXB3-204ENST00000513318 HDAC11Q96DB2 347 aa7.75□□□□□ -1.17
HMGXB3-204ENST00000513318 HMCESQ96FZ2 354 aa7.75□□□□□ -1.17
HMGXB3-204ENST00000513318 CELF6Q96J87 481 aaKnown RBP7.75□□□□□ -1.17
HMGXB3-204ENST00000513318 PBKQ96KB5 322 aa7.75□□□□□ -1.17
HMGXB3-204ENST00000513318 WDR24Q96S15 920 aa7.75□□□□□ -1.17
HMGXB3-204ENST00000513318 NAPGQ99747 312 aaPredicted RBP7.75□□□□□ -1.17
HMGXB3-204ENST00000513318 IER2Q9BTL4 223 aa7.75□□□□□ -1.17
HMGXB3-204ENST00000513318 SPON2Q9BUD6 331 aa7.75□□□□□ -1.17
HMGXB3-204ENST00000513318 SLC39A8Q9C0K1 460 aa7.75□□□□□ -1.17
HMGXB3-204ENST00000513318 SP110Q9HB58 689 aa7.75□□□□□ -1.17
HMGXB3-204ENST00000513318 RBM12Q9NTZ6 932 aaKnown RBP7.75□□□□□ -1.17
HMGXB3-204ENST00000513318 DTLQ9NZJ0 730 aa7.75□□□□□ -1.17
HMGXB3-204ENST00000513318 VPS51Q9UID3 782 aa7.75□□□□□ -1.17
HMGXB3-204ENST00000513318 PLA2G4CQ9UP65 541 aa7.75□□□□□ -1.17
HMGXB3-204ENST00000513318 HS3ST2Q9Y278 367 aa7.75□□□□□ -1.17
HMGXB3-204ENST00000513318 SIT1Q9Y3P8 196 aa7.75□□□□□ -1.17
HMGXB3-204ENST00000513318 MYLKQ15746 1914 aa7.75□□□□□ -1.17
HMGXB3-204ENST00000513318 SCN8AQ9UQD0 1980 aa7.75□□□□□ -1.17
HMGXB3-204ENST00000513318 CTAGE9A4FU28 777 aa7.74□□□□□ -1.17
HMGXB3-204ENST00000513318 CHURC1-FNTBB4DL54 471 aa7.74□□□□□ -1.17
HMGXB3-204ENST00000513318 CFAP99D6REC4 459 aa7.74□□□□□ -1.17
HMGXB3-204ENST00000513318 RNF223E7ERA6 249 aa7.74□□□□□ -1.17
HMGXB3-204ENST00000513318 KIF2AO00139 706 aaPredicted RBP7.74□□□□□ -1.17
HMGXB3-204ENST00000513318 CBX4O00257 560 aa7.74□□□□□ -1.17
HMGXB3-204ENST00000513318 DFFAO00273 331 aa7.74□□□□□ -1.17
HMGXB3-204ENST00000513318 CES2O00748 559 aa7.74□□□□□ -1.17
HMGXB3-204ENST00000513318 PPP1R12AO14974 1030 aaPredicted RBP7.74□□□□□ -1.17
HMGXB3-204ENST00000513318 KDELR3O43731 214 aa7.74□□□□□ -1.17
HMGXB3-204ENST00000513318 SNAP91O60641 907 aa7.74□□□□□ -1.17
HMGXB3-204ENST00000513318 ZMPSTE24O75844 475 aa7.74□□□□□ -1.17
HMGXB3-204ENST00000513318 PDGFBP01127 241 aaPredicted RBP7.74□□□□□ -1.17
HMGXB3-204ENST00000513318 TUBB4AP04350 444 aa7.74□□□□□ -1.17
HMGXB3-204ENST00000513318 TCP1P17987 556 aaKnown RBP7.74□□□□□ -1.17
HMGXB3-204ENST00000513318 AOC1P19801 751 aa7.74□□□□□ -1.17
HMGXB3-204ENST00000513318 GLDCP23378 1020 aa7.74□□□□□ -1.17
HMGXB3-204ENST00000513318 NTSR1P30989 418 aa7.74□□□□□ -1.17
HMGXB3-204ENST00000513318 CXCR5P32302 372 aa7.74□□□□□ -1.17
HMGXB3-204ENST00000513318 GARSP41250 739 aaKnown RBP7.74□□□□□ -1.17
HMGXB3-204ENST00000513318 PI4KAP42356 2102 aa7.74□□□□□ -1.17
HMGXB3-204ENST00000513318 PAPOLAP51003 745 aaKnown RBP7.74□□□□□ -1.17
HMGXB3-204ENST00000513318 MMP16P51512 607 aa7.74□□□□□ -1.17
HMGXB3-204ENST00000513318 CLCN5P51795 746 aa7.74□□□□□ -1.17
HMGXB3-204ENST00000513318 SEC13P55735 322 aa7.74□□□□□ -1.17
HMGXB3-204ENST00000513318 ARF5P84085 180 aa7.74□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms