RNA–Protein interactions for RNA: ENST00000513284.5

RNF4-218, Transcript of ring finger protein 4, humanhuman

TSL 4

Gene RNF4, Length 517 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-218ENST00000513284 BOCQ9BWV1 1114 aa11.5□□□□□ -0.57
RNF4-218ENST00000513284 TCEAL2Q9H3H9 227 aaPredicted RBP11.5□□□□□ -0.57
RNF4-218ENST00000513284 CNGB3Q9NQW8 809 aa11.5□□□□□ -0.57
RNF4-218ENST00000513284 RABGEF1Q9UJ41 708 aa11.5□□□□□ -0.57
RNF4-218ENST00000513284 CEP83Q9Y592 693 aa11.5□□□□□ -0.57
RNF4-218ENST00000513284 ZFC3H1O60293 1989 aaKnown RBP11.5□□□□□ -0.57
RNF4-218ENST00000513284 PDXKO00764 312 aa11.49□□□□□ -0.57
RNF4-218ENST00000513284 TPP1O14773 563 aa11.49□□□□□ -0.57
RNF4-218ENST00000513284 AQP9O43315 295 aa11.49□□□□□ -0.57
RNF4-218ENST00000513284 PDGFRAP16234 1089 aa11.49□□□□□ -0.57
RNF4-218ENST00000513284 AKT2P31751 481 aa11.49□□□□□ -0.57
RNF4-218ENST00000513284 NNMTP40261 264 aa11.49□□□□□ -0.57
RNF4-218ENST00000513284 BST2Q10589 180 aaKnown RBP11.49□□□□□ -0.57
RNF4-218ENST00000513284 EIF2B5Q13144 721 aaKnown RBP11.49□□□□□ -0.57
RNF4-218ENST00000513284 MAPK8IP2Q13387 824 aaPredicted RBP11.49□□□□□ -0.57
RNF4-218ENST00000513284 NR0B2Q15466 257 aa11.49□□□□□ -0.57
RNF4-218ENST00000513284 CXorf57Q6NSI4 855 aaKnown RBP11.49□□□□□ -0.57
RNF4-218ENST00000513284 Q6ZVU0 165 aa11.49□□□□□ -0.57
RNF4-218ENST00000513284 RAB11FIP2Q7L804 512 aa11.49□□□□□ -0.57
RNF4-218ENST00000513284 DTX1Q86Y01 620 aa11.49□□□□□ -0.57
RNF4-218ENST00000513284 DCP2Q8IU60 420 aaKnown RBP11.49□□□□□ -0.57
RNF4-218ENST00000513284 GRAMD1CQ8IYS0 662 aa11.49□□□□□ -0.57
RNF4-218ENST00000513284 LGI2Q8N0V4 545 aa11.49□□□□□ -0.57
RNF4-218ENST00000513284 ZNF564Q8TBZ8 553 aaPredicted RBP11.49□□□□□ -0.57
RNF4-218ENST00000513284 EEF2KMTQ96G04 330 aa11.49□□□□□ -0.57
RNF4-218ENST00000513284 KLF6Q99612 283 aaPredicted RBP11.49□□□□□ -0.57
RNF4-218ENST00000513284 CCDC3Q9BQI4 270 aa11.49□□□□□ -0.57
RNF4-218ENST00000513284 IMPG2Q9BZV3 1241 aa11.49□□□□□ -0.57
RNF4-218ENST00000513284 EXOC1Q9NV70 894 aa11.49□□□□□ -0.57
RNF4-218ENST00000513284 EVA1BQ9NVM1 165 aa11.49□□□□□ -0.57
RNF4-218ENST00000513284 OR51B4Q9Y5P0 310 aa11.49□□□□□ -0.57
RNF4-218ENST00000513284 CREBBPQ92793 2442 aa11.49□□□□□ -0.57
RNF4-218ENST00000513284 SCN8AQ9UQD0 1980 aa11.48□□□□□ -0.57
RNF4-218ENST00000513284 ICE1Q9Y2F5 2266 aa11.48□□□□□ -0.57
RNF4-218ENST00000513284 SPENQ96T58 3664 aaKnown RBP11.48□□□□□ -0.57
RNF4-218ENST00000513284 ALOX15BO15296 676 aa11.48□□□□□ -0.57
RNF4-218ENST00000513284 NVLO15381 856 aaKnown RBP11.48□□□□□ -0.57
RNF4-218ENST00000513284 PAK4O96013 591 aaPredicted RBP11.48□□□□□ -0.57
RNF4-218ENST00000513284 MT-CO1P00395 513 aa11.48□□□□□ -0.57
RNF4-218ENST00000513284 MYL1P05976 194 aa11.48□□□□□ -0.57
RNF4-218ENST00000513284 LIPCP11150 499 aa11.48□□□□□ -0.57
RNF4-218ENST00000513284 AFMP43652 599 aa11.48□□□□□ -0.57
RNF4-218ENST00000513284 RGS7P49802 495 aa11.48□□□□□ -0.57
RNF4-218ENST00000513284 SLC8A3P57103 927 aa11.48□□□□□ -0.57
RNF4-218ENST00000513284 C1orf61Q13536 156 aa11.48□□□□□ -0.57
RNF4-218ENST00000513284 MORC3Q14149 939 aa11.48□□□□□ -0.57
RNF4-218ENST00000513284 ACCSLQ4AC99 568 aa11.48□□□□□ -0.57
RNF4-218ENST00000513284 SYPL2Q5VXT5 272 aa11.48□□□□□ -0.57
RNF4-218ENST00000513284 RAP1GAP2Q684P5 730 aa11.48□□□□□ -0.57
RNF4-218ENST00000513284 DSG4Q86SJ6 1040 aa11.48□□□□□ -0.57
RNF4-218ENST00000513284 CIR1Q86X95 450 aaPredicted RBP11.48□□□□□ -0.57
RNF4-218ENST00000513284 ZFAND4Q86XD8 727 aa11.48□□□□□ -0.57
RNF4-218ENST00000513284 JAMLQ86YT9 394 aa11.48□□□□□ -0.57
RNF4-218ENST00000513284 CCAR2Q8N163 923 aaKnown RBP11.48□□□□□ -0.57
RNF4-218ENST00000513284 SIX6OS1Q8N1H7 587 aa11.48□□□□□ -0.57
RNF4-218ENST00000513284 LMX1AQ8TE12 382 aa11.48□□□□□ -0.57
RNF4-218ENST00000513284 DQX1Q8TE96 717 aaKnown RBP11.48□□□□□ -0.57
RNF4-218ENST00000513284 IRGQQ8WZA9 623 aa11.48□□□□□ -0.57
RNF4-218ENST00000513284 TFAP2BQ92481 460 aa11.48□□□□□ -0.57
RNF4-218ENST00000513284 SNX21Q969T3 373 aa11.48□□□□□ -0.57
RNF4-218ENST00000513284 FAXDC2Q96IV6 333 aa11.48□□□□□ -0.57
RNF4-218ENST00000513284 PRMT1Q99873 361 aaKnown RBP11.48□□□□□ -0.57
RNF4-218ENST00000513284 DDX50Q9BQ39 737 aaKnown RBP11.48□□□□□ -0.57
RNF4-218ENST00000513284 ZSWIM1Q9BR11 485 aa11.48□□□□□ -0.57
RNF4-218ENST00000513284 FEM1AQ9BSK4 669 aa11.48□□□□□ -0.57
RNF4-218ENST00000513284 FOXP3Q9BZS1 431 aa11.48□□□□□ -0.57
RNF4-218ENST00000513284 CLPBQ9H078 707 aa11.48□□□□□ -0.57
RNF4-218ENST00000513284 MMRN2Q9H8L6 949 aa11.48□□□□□ -0.57
RNF4-218ENST00000513284 NAALADL1Q9UQQ1 740 aa11.48□□□□□ -0.57
RNF4-218ENST00000513284 TLR6Q9Y2C9 796 aa11.48□□□□□ -0.57
RNF4-218ENST00000513284 FRMD4BQ9Y2L6 1034 aa11.48□□□□□ -0.57
RNF4-218ENST00000513284 ANKRD17O75179 2603 aaKnown RBP11.47□□□□□ -0.57
RNF4-218ENST00000513284 A0A1W2PQM1 296 aa11.47□□□□□ -0.57
RNF4-218ENST00000513284 A6NNZ2 444 aa11.47□□□□□ -0.57
RNF4-218ENST00000513284 C1QTNF3-AMACRE9PGA6 284 aa11.47□□□□□ -0.57
RNF4-218ENST00000513284 O00370 1275 aa11.47□□□□□ -0.57
RNF4-218ENST00000513284 MAPK13O15264 365 aa11.47□□□□□ -0.57
RNF4-218ENST00000513284 YY2O15391 372 aa11.47□□□□□ -0.57
RNF4-218ENST00000513284 MOCS2O96007 188 aaPredicted RBP11.47□□□□□ -0.57
RNF4-218ENST00000513284 F13A1P00488 732 aa11.47□□□□□ -0.57
RNF4-218ENST00000513284 LTFP02788 710 aa11.47□□□□□ -0.57
RNF4-218ENST00000513284 ZSCAN22P10073 491 aaPredicted RBP11.47□□□□□ -0.57
RNF4-218ENST00000513284 ZNF18P17022 549 aa11.47□□□□□ -0.57
RNF4-218ENST00000513284 JUNDP17535 347 aa11.47□□□□□ -0.57
RNF4-218ENST00000513284 TACR2P21452 398 aa11.47□□□□□ -0.57
RNF4-218ENST00000513284 ETV5P41161 510 aa11.47□□□□□ -0.57
RNF4-218ENST00000513284 CASRP41180 1078 aa11.47□□□□□ -0.57
RNF4-218ENST00000513284 IRAK1P51617 712 aa11.47□□□□□ -0.57
RNF4-218ENST00000513284 SULT2A1Q06520 285 aa11.47□□□□□ -0.57
RNF4-218ENST00000513284 EIF4EBP2Q13542 120 aaPredicted RBP11.47□□□□□ -0.57
RNF4-218ENST00000513284 SLC12A1Q13621 1099 aa11.47□□□□□ -0.57
RNF4-218ENST00000513284 PTAR1Q7Z6K3 402 aaPredicted RBP11.47□□□□□ -0.57
RNF4-218ENST00000513284 RBFAQ8N0V3 343 aa11.47□□□□□ -0.57
RNF4-218ENST00000513284 FAM26EQ8N5C1 309 aa11.47□□□□□ -0.57
RNF4-218ENST00000513284 CHST14Q8NCH0 376 aa11.47□□□□□ -0.57
RNF4-218ENST00000513284 CCDC150Q8NCX0 1101 aa11.47□□□□□ -0.57
RNF4-218ENST00000513284 OR2A12Q8NGT7 310 aa11.47□□□□□ -0.57
RNF4-218ENST00000513284 ERCC4Q92889 916 aaPredicted RBP11.47□□□□□ -0.57
RNF4-218ENST00000513284 PPP1R13BQ96KQ4 1090 aa11.47□□□□□ -0.57
RNF4-218ENST00000513284 SLC12A9Q9BXP2 914 aa11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 67.7 ms