RNA–Protein interactions for RNA: ENST00000512431.5

DDX41-215, Transcript of DEAD-box helicase 41, humanhuman

TSL 5

Gene DDX41, Length 904 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-215ENST00000512431 BTN2A2Q8WVV5 523 aa12.9□□□□□ -0.34
DDX41-215ENST00000512431 NAT6Q93015 286 aa12.9□□□□□ -0.34
DDX41-215ENST00000512431 EEF2KMTQ96G04 330 aa12.9□□□□□ -0.34
DDX41-215ENST00000512431 PAGE5Q96GU1 130 aa12.9□□□□□ -0.34
DDX41-215ENST00000512431 HSFY1Q96LI6 401 aa12.9□□□□□ -0.34
DDX41-215ENST00000512431 NOX5Q96PH1 765 aa12.9□□□□□ -0.34
DDX41-215ENST00000512431 SEMA3CQ99985 751 aa12.9□□□□□ -0.34
DDX41-215ENST00000512431 XPO7Q9UIA9 1087 aaKnown RBP12.9□□□□□ -0.34
DDX41-215ENST00000512431 COL12A1Q99715 3063 aa12.9□□□□□ -0.35
DDX41-215ENST00000512431 SPTY2D1-AS1A0A0U1RR47 76 aa12.89□□□□□ -0.35
DDX41-215ENST00000512431 TCAF2A6NFQ2 919 aa12.89□□□□□ -0.35
DDX41-215ENST00000512431 TMX2-CTNND1H3BSU7 103 aa12.89□□□□□ -0.35
DDX41-215ENST00000512431 M0QYV0 167 aa12.89□□□□□ -0.35
DDX41-215ENST00000512431 TPP1O14773 563 aa12.89□□□□□ -0.35
DDX41-215ENST00000512431 MUSKO15146 869 aa12.89□□□□□ -0.35
DDX41-215ENST00000512431 PPFIA2O75334 1257 aa12.89□□□□□ -0.35
DDX41-215ENST00000512431 MYL1P05976 194 aa12.89□□□□□ -0.35
DDX41-215ENST00000512431 FAM87AP0C7U9 286 aa12.89□□□□□ -0.35
DDX41-215ENST00000512431 NME1P15531 152 aaKnown RBP12.89□□□□□ -0.35
DDX41-215ENST00000512431 ITGB6P18564 788 aa12.89□□□□□ -0.35
DDX41-215ENST00000512431 SLC5A2P31639 672 aa12.89□□□□□ -0.35
DDX41-215ENST00000512431 TLE1Q04724 770 aa12.89□□□□□ -0.35
DDX41-215ENST00000512431 EIF3IQ13347 325 aaKnown RBP12.89□□□□□ -0.35
DDX41-215ENST00000512431 STILQ15468 1287 aa12.89□□□□□ -0.35
DDX41-215ENST00000512431 DEFB133Q30KQ1 61 aa12.89□□□□□ -0.35
DDX41-215ENST00000512431 RESP18Q5W5W9 173 aa12.89□□□□□ -0.35
DDX41-215ENST00000512431 FBXO39Q8N4B4 442 aa12.89□□□□□ -0.35
DDX41-215ENST00000512431 LMX1AQ8TE12 382 aa12.89□□□□□ -0.35
DDX41-215ENST00000512431 STRADBQ9C0K7 418 aa12.89□□□□□ -0.35
DDX41-215ENST00000512431 SLTMQ9NWH9 1034 aaKnown RBP eCLIP12.89□□□□□ -0.35
DDX41-215ENST00000512431 VPS28Q9UK41 221 aa12.89□□□□□ -0.35
DDX41-215ENST00000512431 NAALADL1Q9UQQ1 740 aa12.89□□□□□ -0.35
DDX41-215ENST00000512431 PCDHGA7Q9Y5G6 932 aa12.89□□□□□ -0.35
DDX41-215ENST00000512431 PMS2P1A4D2B8 440 aa12.88□□□□□ -0.35
DDX41-215ENST00000512431 PLD2O14939 933 aa12.88□□□□□ -0.35
DDX41-215ENST00000512431 PRNPP04156 253 aa12.88□□□□□ -0.35
DDX41-215ENST00000512431 FYNP06241 537 aa12.88□□□□□ -0.35
DDX41-215ENST00000512431 PAEPP09466 180 aa12.88□□□□□ -0.35
DDX41-215ENST00000512431 EPB41P11171 864 aaKnown RBP12.88□□□□□ -0.35
DDX41-215ENST00000512431 JUNDP17535 347 aa12.88□□□□□ -0.35
DDX41-215ENST00000512431 TBXAS1P24557 533 aaPredicted RBP12.88□□□□□ -0.35
DDX41-215ENST00000512431 CHRNA3P32297 505 aa12.88□□□□□ -0.35
DDX41-215ENST00000512431 RABIFP47224 123 aa12.88□□□□□ -0.35
DDX41-215ENST00000512431 MAPK8IP2Q13387 824 aaPredicted RBP12.88□□□□□ -0.35
DDX41-215ENST00000512431 FZD2Q14332 565 aa12.88□□□□□ -0.35
DDX41-215ENST00000512431 CNGA2Q16280 664 aa12.88□□□□□ -0.35
DDX41-215ENST00000512431 ZC3H12AQ5D1E8 599 aaKnown RBP12.88□□□□□ -0.35
DDX41-215ENST00000512431 MANEAQ5SRI9 462 aa12.88□□□□□ -0.35
DDX41-215ENST00000512431 TCERG1LQ5VWI1 586 aa12.88□□□□□ -0.35
DDX41-215ENST00000512431 ERICH6BQ5W0A0 696 aa12.88□□□□□ -0.35
DDX41-215ENST00000512431 ESRP1Q6NXG1 681 aaKnown RBP12.88□□□□□ -0.35
DDX41-215ENST00000512431 KYAT3Q6YP21 454 aaKnown RBP12.88□□□□□ -0.35
DDX41-215ENST00000512431 ERN2Q76MJ5 926 aaKnown RBP12.88□□□□□ -0.35
DDX41-215ENST00000512431 RAB11FIP2Q7L804 512 aa12.88□□□□□ -0.35
DDX41-215ENST00000512431 TAC4Q86UU9 113 aa12.88□□□□□ -0.35
DDX41-215ENST00000512431 CIR1Q86X95 450 aaPredicted RBP12.88□□□□□ -0.35
DDX41-215ENST00000512431 SH2D3CQ8N5H7 860 aa12.88□□□□□ -0.35
DDX41-215ENST00000512431 ATP11CQ8NB49 1132 aa12.88□□□□□ -0.35
DDX41-215ENST00000512431 TMIEQ8NEW7 156 aa12.88□□□□□ -0.35
DDX41-215ENST00000512431 LIN37Q96GY3 246 aaPredicted RBP12.88□□□□□ -0.35
DDX41-215ENST00000512431 PPP1R16AQ96I34 528 aa12.88□□□□□ -0.35
DDX41-215ENST00000512431 FEM1CQ96JP0 617 aa12.88□□□□□ -0.35
DDX41-215ENST00000512431 BMFQ96LC9 184 aa12.88□□□□□ -0.35
DDX41-215ENST00000512431 SLC17A9Q9BYT1 436 aa12.88□□□□□ -0.35
DDX41-215ENST00000512431 CAAP1Q9H8G2 361 aa12.88□□□□□ -0.35
DDX41-215ENST00000512431 SPASTQ9UBP0 616 aa12.88□□□□□ -0.35
DDX41-215ENST00000512431 PCDHA7Q9UN72 937 aa12.88□□□□□ -0.35
DDX41-215ENST00000512431 ZFR2Q9UPR6 939 aaKnown RBP12.88□□□□□ -0.35
DDX41-215ENST00000512431 MAPK8IP1Q9UQF2 711 aa12.88□□□□□ -0.35
DDX41-215ENST00000512431 KCNU1A8MYU2 1149 aa12.87□□□□□ -0.35
DDX41-215ENST00000512431 FPGTO14772 594 aa12.87□□□□□ -0.35
DDX41-215ENST00000512431 GABBR2O75899 941 aa12.87□□□□□ -0.35
DDX41-215ENST00000512431 PAK4O96013 591 aaPredicted RBP12.87□□□□□ -0.35
DDX41-215ENST00000512431 JMJD7P0C870 316 aa12.87□□□□□ -0.35
DDX41-215ENST00000512431 LIPCP11150 499 aa12.87□□□□□ -0.35
DDX41-215ENST00000512431 RPS21P63220 83 aaKnown RBP12.87□□□□□ -0.35
DDX41-215ENST00000512431 KRT83P78385 493 aa12.87□□□□□ -0.35
DDX41-215ENST00000512431 SGCGQ13326 291 aa12.87□□□□□ -0.35
DDX41-215ENST00000512431 PDE1CQ14123 709 aaPredicted RBP12.87□□□□□ -0.35
DDX41-215ENST00000512431 TGIF1Q15583 401 aa12.87□□□□□ -0.35
DDX41-215ENST00000512431 DCAF17Q5H9S7 520 aaPredicted RBP12.87□□□□□ -0.35
DDX41-215ENST00000512431 PERM1Q5SV97 790 aa12.87□□□□□ -0.35
DDX41-215ENST00000512431 SEL1L3Q68CR1 1132 aa12.87□□□□□ -0.35
DDX41-215ENST00000512431 KIAA1161Q6NSJ0 714 aa12.87□□□□□ -0.35
DDX41-215ENST00000512431 TMEM270Q6UE05 265 aa12.87□□□□□ -0.35
DDX41-215ENST00000512431 BEND5Q7L4P6 421 aa12.87□□□□□ -0.35
DDX41-215ENST00000512431 INTS4Q96HW7 963 aaKnown RBP12.87□□□□□ -0.35
DDX41-215ENST00000512431 RPRD1AQ96P16 312 aaPredicted RBP12.87□□□□□ -0.35
DDX41-215ENST00000512431 CCDC3Q9BQI4 270 aa12.87□□□□□ -0.35
DDX41-215ENST00000512431 FEM1AQ9BSK4 669 aa12.87□□□□□ -0.35
DDX41-215ENST00000512431 SLC25A18Q9H1K4 315 aa12.87□□□□□ -0.35
DDX41-215ENST00000512431 EPB41L5Q9HCM4 733 aa12.87□□□□□ -0.35
DDX41-215ENST00000512431 ST7Q9NRC1 585 aa12.87□□□□□ -0.35
DDX41-215ENST00000512431 PCDHB11Q9Y5F2 797 aa12.87□□□□□ -0.35
DDX41-215ENST00000512431 PIEZO2Q9H5I5 2752 aa12.87□□□□□ -0.35
DDX41-215ENST00000512431 NYNRINQ9P2P1 1898 aaKnown RBP12.87□□□□□ -0.35
DDX41-215ENST00000512431 UBR5O95071 2799 aaPredicted RBP12.86□□□□□ -0.35
DDX41-215ENST00000512431 POM121BA6NF01 834 aa12.86□□□□□ -0.35
DDX41-215ENST00000512431 CETN3O15182 167 aa12.86□□□□□ -0.35
DDX41-215ENST00000512431 ACTN4O43707 911 aaKnown RBP12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms