RNA–Protein interactions for RNA: ENST00000511653.1

COPS4-209, Transcript of COP9 signalosome subunit 4, humanhuman

TSL 1 (best) BASIC

Gene COPS4, Length 1,695 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS4-209ENST00000511653 WASH3PC4AMC7 463 aa6.99□□□□□ -1.29
COPS4-209ENST00000511653 NEDD8-MDP1E9PL57 170 aa6.99□□□□□ -1.29
COPS4-209ENST00000511653 AURKAO14965 403 aa6.99□□□□□ -1.29
COPS4-209ENST00000511653 MDM4O15151 490 aa6.99□□□□□ -1.29
COPS4-209ENST00000511653 OPHN1O60890 802 aa6.99□□□□□ -1.29
COPS4-209ENST00000511653 PLXNA2O75051 1894 aa6.99□□□□□ -1.29
COPS4-209ENST00000511653 GJB3O75712 270 aa6.99□□□□□ -1.29
COPS4-209ENST00000511653 UBE4BO95155 1302 aa6.99□□□□□ -1.29
COPS4-209ENST00000511653 VNN1O95497 513 aa6.99□□□□□ -1.29
COPS4-209ENST00000511653 THBDP07204 575 aa6.99□□□□□ -1.29
COPS4-209ENST00000511653 PDCP20941 246 aa6.99□□□□□ -1.29
COPS4-209ENST00000511653 MASP1P48740 699 aa6.99□□□□□ -1.29
COPS4-209ENST00000511653 TUBP50607 506 aa6.99□□□□□ -1.29
COPS4-209ENST00000511653 ATXN3P54252 364 aaPredicted RBP6.99□□□□□ -1.29
COPS4-209ENST00000511653 GFPT1Q06210 699 aaPredicted RBP6.99□□□□□ -1.29
COPS4-209ENST00000511653 TRPC3Q13507 836 aa6.99□□□□□ -1.29
COPS4-209ENST00000511653 ZNF699Q32M78 642 aa6.99□□□□□ -1.29
COPS4-209ENST00000511653 BTBD8Q5XKL5 378 aa6.99□□□□□ -1.29
COPS4-209ENST00000511653 GRAMD4Q6IC98 578 aa6.99□□□□□ -1.29
COPS4-209ENST00000511653 POMZP3Q6PJE2 187 aa6.99□□□□□ -1.29
COPS4-209ENST00000511653 TPGS1Q6ZTW0 290 aa6.99□□□□□ -1.29
COPS4-209ENST00000511653 STXBP4Q6ZWJ1 553 aa6.99□□□□□ -1.29
COPS4-209ENST00000511653 ACOT1Q86TX2 421 aa6.99□□□□□ -1.29
COPS4-209ENST00000511653 CHPFQ8IZ52 775 aa6.99□□□□□ -1.29
COPS4-209ENST00000511653 HDDC3Q8N4P3 179 aa6.99□□□□□ -1.29
COPS4-209ENST00000511653 PNPLA1Q8N8W4 532 aa6.99□□□□□ -1.29
COPS4-209ENST00000511653 C12orf29Q8N999 325 aa6.99□□□□□ -1.29
COPS4-209ENST00000511653 TRIML1Q8N9V2 468 aa6.99□□□□□ -1.29
COPS4-209ENST00000511653 SLC2A14Q8TDB8 520 aa6.99□□□□□ -1.29
COPS4-209ENST00000511653 IPO4Q8TEX9 1081 aaKnown RBP6.99□□□□□ -1.29
COPS4-209ENST00000511653 FRS2Q8WU20 508 aa6.99□□□□□ -1.29
COPS4-209ENST00000511653 OTUB2Q96DC9 234 aa6.99□□□□□ -1.29
COPS4-209ENST00000511653 SMARCD1Q96GM5 515 aa6.99□□□□□ -1.29
COPS4-209ENST00000511653 MED10Q9BTT4 135 aa6.99□□□□□ -1.29
COPS4-209ENST00000511653 BLZF1Q9H2G9 400 aa6.99□□□□□ -1.29
COPS4-209ENST00000511653 NMUR1Q9HB89 426 aa6.99□□□□□ -1.29
COPS4-209ENST00000511653 ATP13A1Q9HD20 1204 aa6.99□□□□□ -1.29
COPS4-209ENST00000511653 FAM49BQ9NUQ9 324 aa6.99□□□□□ -1.29
COPS4-209ENST00000511653 NYNRINQ9P2P1 1898 aaKnown RBP6.99□□□□□ -1.29
COPS4-209ENST00000511653 TRAF6Q9Y4K3 522 aa6.99□□□□□ -1.29
COPS4-209ENST00000511653 CYP26A1O43174 497 aa6.98□□□□□ -1.29
COPS4-209ENST00000511653 SH3BP5O60239 455 aa6.98□□□□□ -1.29
COPS4-209ENST00000511653 CACNG3O60359 315 aa6.98□□□□□ -1.29
COPS4-209ENST00000511653 CLSTN1O94985 981 aa6.98□□□□□ -1.29
COPS4-209ENST00000511653 SCG5P05408 212 aa6.98□□□□□ -1.29
COPS4-209ENST00000511653 GSNP06396 782 aa6.98□□□□□ -1.29
COPS4-209ENST00000511653 FAM163BP0C2L3 166 aa6.98□□□□□ -1.29
COPS4-209ENST00000511653 TYRP14679 529 aa6.98□□□□□ -1.29
COPS4-209ENST00000511653 VAV1P15498 845 aa6.98□□□□□ -1.29
COPS4-209ENST00000511653 ITGB7P26010 798 aa6.98□□□□□ -1.29
COPS4-209ENST00000511653 ATICP31939 592 aa6.98□□□□□ -1.29
COPS4-209ENST00000511653 DPP6P42658 865 aa6.98□□□□□ -1.29
COPS4-209ENST00000511653 MAP3K7CLP57077 242 aa6.98□□□□□ -1.29
COPS4-209ENST00000511653 BIRC3Q13489 604 aa6.98□□□□□ -1.29
COPS4-209ENST00000511653 BYSLQ13895 437 aaKnown RBP6.98□□□□□ -1.29
COPS4-209ENST00000511653 STK38Q15208 465 aa6.98□□□□□ -1.29
COPS4-209ENST00000511653 BMT2Q1RMZ1 405 aa6.98□□□□□ -1.29
COPS4-209ENST00000511653 SPOPLQ6IQ16 392 aa6.98□□□□□ -1.29
COPS4-209ENST00000511653 CNNM4Q6P4Q7 775 aa6.98□□□□□ -1.29
COPS4-209ENST00000511653 SHC4Q6S5L8 630 aa6.98□□□□□ -1.29
COPS4-209ENST00000511653 LRSAM1Q6UWE0 723 aa6.98□□□□□ -1.29
COPS4-209ENST00000511653 SLC36A4Q6YBV0 504 aa6.98□□□□□ -1.29
COPS4-209ENST00000511653 TRMT11Q7Z4G4 463 aaKnown RBP6.98□□□□□ -1.29
COPS4-209ENST00000511653 FGD2Q7Z6J4 655 aa6.98□□□□□ -1.29
COPS4-209ENST00000511653 PROSER1Q86XN7 944 aa6.98□□□□□ -1.29
COPS4-209ENST00000511653 CCDC103Q8IW40 242 aa6.98□□□□□ -1.29
COPS4-209ENST00000511653 LINC00301Q8NCQ3 95 aa6.98□□□□□ -1.29
COPS4-209ENST00000511653 CEP76Q8TAP6 659 aa6.98□□□□□ -1.29
COPS4-209ENST00000511653 SYAP1Q96A49 352 aaPredicted RBP6.98□□□□□ -1.29
COPS4-209ENST00000511653 JAKMIP2Q96AA8 810 aa6.98□□□□□ -1.29
COPS4-209ENST00000511653 MRGPRX1Q96LB2 322 aa6.98□□□□□ -1.29
COPS4-209ENST00000511653 TWNKQ96RR1 684 aa6.98□□□□□ -1.29
COPS4-209ENST00000511653 GABRG3Q99928 467 aa6.98□□□□□ -1.29
COPS4-209ENST00000511653 BBS2Q9BXC9 721 aa6.98□□□□□ -1.29
COPS4-209ENST00000511653 NACA2Q9H009 215 aa6.98□□□□□ -1.29
COPS4-209ENST00000511653 SLC39A2Q9NP94 309 aa6.98□□□□□ -1.29
COPS4-209ENST00000511653 PLK2Q9NYY3 685 aa6.98□□□□□ -1.29
COPS4-209ENST00000511653 NUDT5Q9UKK9 219 aa6.98□□□□□ -1.29
COPS4-209ENST00000511653 SF3B6Q9Y3B4 125 aaKnown RBP6.98□□□□□ -1.29
COPS4-209ENST00000511653 SPTA1P02549 2419 aa6.98□□□□□ -1.29
COPS4-209ENST00000511653 DOCK9Q9BZ29 2069 aa6.98□□□□□ -1.29
COPS4-209ENST00000511653 SHROOM3Q8TF72 1996 aa6.98□□□□□ -1.29
COPS4-209ENST00000511653 ATP8B3O60423 1300 aa6.97□□□□□ -1.29
COPS4-209ENST00000511653 MYLKQ15746 1914 aa6.97□□□□□ -1.29
COPS4-209ENST00000511653 A0A1W2PQD8 194 aa6.97□□□□□ -1.29
COPS4-209ENST00000511653 SPTLC2O15270 562 aa6.97□□□□□ -1.29
COPS4-209ENST00000511653 EXOC3O60645 756 aa6.97□□□□□ -1.29
COPS4-209ENST00000511653 ESR1P03372 595 aa6.97□□□□□ -1.29
COPS4-209ENST00000511653 C4BPAP04003 597 aaKnown RBP6.97□□□□□ -1.29
COPS4-209ENST00000511653 SYPP08247 313 aa6.97□□□□□ -1.29
COPS4-209ENST00000511653 FURINP09958 794 aa6.97□□□□□ -1.29
COPS4-209ENST00000511653 CISD3P0C7P0 127 aa6.97□□□□□ -1.29
COPS4-209ENST00000511653 FTH1P19P0C7X4 201 aa6.97□□□□□ -1.29
COPS4-209ENST00000511653 ADORA2BP29275 332 aa6.97□□□□□ -1.29
COPS4-209ENST00000511653 HOXC12P31275 282 aa6.97□□□□□ -1.29
COPS4-209ENST00000511653 NDST1P52848 882 aa6.97□□□□□ -1.29
COPS4-209ENST00000511653 SUMO1P63165 101 aaKnown RBP6.97□□□□□ -1.29
COPS4-209ENST00000511653 DLG4P78352 724 aa6.97□□□□□ -1.29
COPS4-209ENST00000511653 GRIK2Q13002 908 aa6.97□□□□□ -1.29
COPS4-209ENST00000511653 CUL4BQ13620 913 aa6.97□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 140.4 ms