RNA–Protein interactions for RNA: ENST00000511586.5

PDLIM5-215, Transcript of PDZ and LIM domain 5, humanhuman

TSL 4

Gene PDLIM5, Length 547 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-215ENST00000511586 RASA4BC9J798 803 aa7.3□□□□□ -1.24
PDLIM5-215ENST00000511586 MCF2LO15068 1137 aa7.3□□□□□ -1.24
PDLIM5-215ENST00000511586 ALOX15BO15296 676 aa7.3□□□□□ -1.24
PDLIM5-215ENST00000511586 RASA4O43374 803 aa7.3□□□□□ -1.24
PDLIM5-215ENST00000511586 SMAD6O43541 496 aaKnown RBP7.3□□□□□ -1.24
PDLIM5-215ENST00000511586 BUB1O43683 1085 aa7.3□□□□□ -1.24
PDLIM5-215ENST00000511586 NDUFS2O75306 463 aa7.3□□□□□ -1.24
PDLIM5-215ENST00000511586 IGLV3-19P01714 112 aa7.3□□□□□ -1.24
PDLIM5-215ENST00000511586 RETP07949 1114 aa7.3□□□□□ -1.24
PDLIM5-215ENST00000511586 VAV1P15498 845 aa7.3□□□□□ -1.24
PDLIM5-215ENST00000511586 BCKDHBP21953 392 aa7.3□□□□□ -1.24
PDLIM5-215ENST00000511586 CD6P30203 668 aa7.3□□□□□ -1.24
PDLIM5-215ENST00000511586 GJC1P36383 396 aa7.3□□□□□ -1.24
PDLIM5-215ENST00000511586 RECQLP46063 649 aaPredicted RBP7.3□□□□□ -1.24
PDLIM5-215ENST00000511586 SERPINH1P50454 418 aaKnown RBP7.3□□□□□ -1.24
PDLIM5-215ENST00000511586 TPMTP51580 245 aa7.3□□□□□ -1.24
PDLIM5-215ENST00000511586 CDH6P55285 790 aa7.3□□□□□ -1.24
PDLIM5-215ENST00000511586 TAS2R40P59535 323 aa7.3□□□□□ -1.24
PDLIM5-215ENST00000511586 ARF5P84085 180 aa7.3□□□□□ -1.24
PDLIM5-215ENST00000511586 SERINC3Q13530 473 aa7.3□□□□□ -1.24
PDLIM5-215ENST00000511586 DPYSQ14117 519 aa7.3□□□□□ -1.24
PDLIM5-215ENST00000511586 PDK2Q15119 407 aa7.3□□□□□ -1.24
PDLIM5-215ENST00000511586 CST6Q15828 149 aa7.3□□□□□ -1.24
PDLIM5-215ENST00000511586 TTC31Q49AM3 519 aaPredicted RBP7.3□□□□□ -1.24
PDLIM5-215ENST00000511586 ATP13A4Q4VNC1 1196 aa7.3□□□□□ -1.24
PDLIM5-215ENST00000511586 SPDYCQ5MJ68 293 aa7.3□□□□□ -1.24
PDLIM5-215ENST00000511586 ZFYVE27Q5T4F4 411 aa7.3□□□□□ -1.24
PDLIM5-215ENST00000511586 LRRC38Q5VT99 294 aa7.3□□□□□ -1.24
PDLIM5-215ENST00000511586 FAM46CQ5VWP2 391 aa7.3□□□□□ -1.24
PDLIM5-215ENST00000511586 PMS2CLQ68D20 193 aa7.3□□□□□ -1.24
PDLIM5-215ENST00000511586 TMCO3Q6UWJ1 677 aa7.3□□□□□ -1.24
PDLIM5-215ENST00000511586 Q6ZVU0 165 aa7.3□□□□□ -1.24
PDLIM5-215ENST00000511586 CACUL1Q86Y37 369 aa7.3□□□□□ -1.24
PDLIM5-215ENST00000511586 CPNE8Q86YQ8 564 aa7.3□□□□□ -1.24
PDLIM5-215ENST00000511586 TMEM139Q8IV31 216 aa7.3□□□□□ -1.24
PDLIM5-215ENST00000511586 MMAAQ8IVH4 418 aaKnown RBP7.3□□□□□ -1.24
PDLIM5-215ENST00000511586 HOMEZQ8IX15 550 aa7.3□□□□□ -1.24
PDLIM5-215ENST00000511586 STK40Q8N2I9 435 aa7.3□□□□□ -1.24
PDLIM5-215ENST00000511586 TXLNBQ8N3L3 684 aa7.3□□□□□ -1.24
PDLIM5-215ENST00000511586 LZTR1Q8N653 840 aa7.3□□□□□ -1.24
PDLIM5-215ENST00000511586 PCDH20Q8N6Y1 951 aaKnown RBP7.3□□□□□ -1.24
PDLIM5-215ENST00000511586 FRMD1Q8N878 549 aa7.3□□□□□ -1.24
PDLIM5-215ENST00000511586 KCTD6Q8NC69 237 aa7.3□□□□□ -1.24
PDLIM5-215ENST00000511586 FAM71BQ8TC56 605 aa7.3□□□□□ -1.24
PDLIM5-215ENST00000511586 GANCQ8TET4 914 aa7.3□□□□□ -1.24
PDLIM5-215ENST00000511586 OR8D1Q8WZ84 308 aa7.3□□□□□ -1.24
PDLIM5-215ENST00000511586 ISG20Q96AZ6 181 aaKnown RBP7.3□□□□□ -1.24
PDLIM5-215ENST00000511586 HMCESQ96FZ2 354 aa7.3□□□□□ -1.24
PDLIM5-215ENST00000511586 CALR3Q96L12 384 aaKnown RBP7.3□□□□□ -1.24
PDLIM5-215ENST00000511586 ZNF830Q96NB3 372 aaPredicted RBP7.3□□□□□ -1.24
PDLIM5-215ENST00000511586 CSPG4P5Q96PW8 444 aa7.3□□□□□ -1.24
PDLIM5-215ENST00000511586 HINFPQ9BQA5 517 aa7.3□□□□□ -1.24
PDLIM5-215ENST00000511586 CEP44Q9C0F1 390 aa7.3□□□□□ -1.24
PDLIM5-215ENST00000511586 SLC39A8Q9C0K1 460 aa7.3□□□□□ -1.24
PDLIM5-215ENST00000511586 KCNF1Q9H3M0 494 aa7.3□□□□□ -1.24
PDLIM5-215ENST00000511586 PCDH18Q9HCL0 1135 aa7.3□□□□□ -1.24
PDLIM5-215ENST00000511586 RCOR3Q9P2K3 495 aaPredicted RBP7.3□□□□□ -1.24
PDLIM5-215ENST00000511586 MBD1Q9UIS9 605 aaPredicted RBP7.3□□□□□ -1.24
PDLIM5-215ENST00000511586 CYP8B1Q9UNU6 501 aa7.3□□□□□ -1.24
PDLIM5-215ENST00000511586 NCKAP1Q9Y2A7 1128 aa7.3□□□□□ -1.24
PDLIM5-215ENST00000511586 FANCMQ8IYD8 2048 aa7.29□□□□□ -1.24
PDLIM5-215ENST00000511586 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa7.29□□□□□ -1.24
PDLIM5-215ENST00000511586 BTNL10A8MVZ5 291 aa7.29□□□□□ -1.24
PDLIM5-215ENST00000511586 C1QTNF3-AMACRE9PGA6 284 aa7.29□□□□□ -1.24
PDLIM5-215ENST00000511586 MID1O15344 667 aa7.29□□□□□ -1.24
PDLIM5-215ENST00000511586 SPOPO43791 374 aa7.29□□□□□ -1.24
PDLIM5-215ENST00000511586 BNIP3LO60238 219 aa7.29□□□□□ -1.24
PDLIM5-215ENST00000511586 BUB1BO60566 1050 aaPredicted RBP7.29□□□□□ -1.24
PDLIM5-215ENST00000511586 CD160O95971 181 aa7.29□□□□□ -1.24
PDLIM5-215ENST00000511586 ADH1BP00325 375 aa7.29□□□□□ -1.24
PDLIM5-215ENST00000511586 IL1BP01584 269 aa7.29□□□□□ -1.24
PDLIM5-215ENST00000511586 C5AR1P21730 350 aa7.29□□□□□ -1.24
PDLIM5-215ENST00000511586 COMTP21964 271 aa7.29□□□□□ -1.24
PDLIM5-215ENST00000511586 AMPD1P23109 780 aa7.29□□□□□ -1.24
PDLIM5-215ENST00000511586 IL4RP24394 825 aa7.29□□□□□ -1.24
PDLIM5-215ENST00000511586 SLC8A1P32418 973 aa7.29□□□□□ -1.24
PDLIM5-215ENST00000511586 PAPOLAP51003 745 aaKnown RBP7.29□□□□□ -1.24
PDLIM5-215ENST00000511586 DNA2P51530 1060 aa7.29□□□□□ -1.24
PDLIM5-215ENST00000511586 ARSEP51690 589 aa7.29□□□□□ -1.24
PDLIM5-215ENST00000511586 RPL6Q02878 288 aaKnown RBP7.29□□□□□ -1.24
PDLIM5-215ENST00000511586 INO80DQ53TQ3 878 aaPredicted RBP7.29□□□□□ -1.24
PDLIM5-215ENST00000511586 ODF2Q5BJF6 829 aa7.29□□□□□ -1.24
PDLIM5-215ENST00000511586 CARD16Q5EG05 197 aa7.29□□□□□ -1.24
PDLIM5-215ENST00000511586 AFMIDQ63HM1 303 aa7.29□□□□□ -1.24
PDLIM5-215ENST00000511586 C22orf39Q6P5X5 142 aa7.29□□□□□ -1.24
PDLIM5-215ENST00000511586 LEKR1Q6ZMV7 388 aa7.29□□□□□ -1.24
PDLIM5-215ENST00000511586 USP30Q70CQ3 517 aa7.29□□□□□ -1.24
PDLIM5-215ENST00000511586 KIAA1328Q86T90 577 aa7.29□□□□□ -1.24
PDLIM5-215ENST00000511586 FAM124AQ86V42 546 aa7.29□□□□□ -1.24
PDLIM5-215ENST00000511586 ARHGAP12Q8IWW6 846 aa7.29□□□□□ -1.24
PDLIM5-215ENST00000511586 RHOT1Q8IXI2 618 aa7.29□□□□□ -1.24
PDLIM5-215ENST00000511586 PLPP6Q8IY26 295 aa7.29□□□□□ -1.24
PDLIM5-215ENST00000511586 TMEFF1Q8IYR6 380 aa7.29□□□□□ -1.24
PDLIM5-215ENST00000511586 GPR161Q8N6U8 529 aaKnown RBP7.29□□□□□ -1.24
PDLIM5-215ENST00000511586 NPWQ8N729 165 aa7.29□□□□□ -1.24
PDLIM5-215ENST00000511586 CADM4Q8NFZ8 388 aa7.29□□□□□ -1.24
PDLIM5-215ENST00000511586 OR2A12Q8NGT7 310 aa7.29□□□□□ -1.24
PDLIM5-215ENST00000511586 CASKIN2Q8WXE0 1202 aa7.29□□□□□ -1.24
PDLIM5-215ENST00000511586 TSC1Q92574 1164 aa7.29□□□□□ -1.24
PDLIM5-215ENST00000511586 FOXJ1Q92949 421 aa7.29□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms