RNA–Protein interactions for RNA: ENST00000511332.1

COL6A6-203, Transcript of collagen type VI alpha 6 chain, humanhuman

TSL 5

Gene COL6A6, Length 778 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A6-203ENST00000511332 AMPD1P23109 780 aa13.13□□□□□ -0.31
COL6A6-203ENST00000511332 GLDCP23378 1020 aa13.13□□□□□ -0.31
COL6A6-203ENST00000511332 FNTBP49356 437 aa13.13□□□□□ -0.31
COL6A6-203ENST00000511332 MMRN1Q13201 1228 aa13.13□□□□□ -0.31
COL6A6-203ENST00000511332 ELAVL3Q14576 367 aaKnown RBP13.13□□□□□ -0.31
COL6A6-203ENST00000511332 ACCSLQ4AC99 568 aa13.13□□□□□ -0.31
COL6A6-203ENST00000511332 HEATR6Q6AI08 1181 aaKnown RBP13.13□□□□□ -0.31
COL6A6-203ENST00000511332 C22orf39Q6P5X5 142 aa13.13□□□□□ -0.31
COL6A6-203ENST00000511332 LINGO4Q6UY18 593 aa13.13□□□□□ -0.31
COL6A6-203ENST00000511332 PEX26Q7Z412 305 aa13.13□□□□□ -0.31
COL6A6-203ENST00000511332 DSG4Q86SJ6 1040 aa13.13□□□□□ -0.31
COL6A6-203ENST00000511332 ARHGAP12Q8IWW6 846 aa13.13□□□□□ -0.31
COL6A6-203ENST00000511332 PGBD3Q8N328 593 aa13.13□□□□□ -0.31
COL6A6-203ENST00000511332 UBL4BQ8N7F7 174 aa13.13□□□□□ -0.31
COL6A6-203ENST00000511332 OR2T3Q8NH03 318 aa13.13□□□□□ -0.31
COL6A6-203ENST00000511332 UBE2Q2Q8WVN8 375 aa13.13□□□□□ -0.31
COL6A6-203ENST00000511332 ATRIPQ8WXE1 791 aa13.13□□□□□ -0.31
COL6A6-203ENST00000511332 RAPGEF5Q92565 580 aa13.13□□□□□ -0.31
COL6A6-203ENST00000511332 SPACA7Q96KW9 195 aa13.13□□□□□ -0.31
COL6A6-203ENST00000511332 ALS2CR12Q96Q35 445 aa13.13□□□□□ -0.31
COL6A6-203ENST00000511332 KLC2Q9H0B6 622 aa13.13□□□□□ -0.31
COL6A6-203ENST00000511332 SP110Q9HB58 689 aa13.13□□□□□ -0.31
COL6A6-203ENST00000511332 SLCO3A1Q9UIG8 710 aa13.13□□□□□ -0.31
COL6A6-203ENST00000511332 AMFRQ9UKV5 643 aa13.13□□□□□ -0.31
COL6A6-203ENST00000511332 GUCA1BQ9UMX6 200 aa13.13□□□□□ -0.31
COL6A6-203ENST00000511332 PPP2R2CQ9Y2T4 447 aa13.13□□□□□ -0.31
COL6A6-203ENST00000511332 CAPN6Q9Y6Q1 641 aa13.13□□□□□ -0.31
COL6A6-203ENST00000511332 WDFY4Q6ZS81 3184 aa13.13□□□□□ -0.31
COL6A6-203ENST00000511332 MUC6Q6W4X9 2439 aa13.12□□□□□ -0.31
COL6A6-203ENST00000511332 C3orf70A6NLC5 250 aaPredicted RBP13.12□□□□□ -0.31
COL6A6-203ENST00000511332 ALOX15BO15296 676 aa13.12□□□□□ -0.31
COL6A6-203ENST00000511332 MFSD11O43934 449 aa13.12□□□□□ -0.31
COL6A6-203ENST00000511332 SIN3BO75182 1162 aa13.12□□□□□ -0.31
COL6A6-203ENST00000511332 ZFXP17010 805 aaPredicted RBP13.12□□□□□ -0.31
COL6A6-203ENST00000511332 IL4RP24394 825 aa13.12□□□□□ -0.31
COL6A6-203ENST00000511332 CTNNA2P26232 953 aa13.12□□□□□ -0.31
COL6A6-203ENST00000511332 CNR2P34972 360 aa13.12□□□□□ -0.31
COL6A6-203ENST00000511332 RECQLP46063 649 aaPredicted RBP13.12□□□□□ -0.31
COL6A6-203ENST00000511332 COPAP53621 1224 aa13.12□□□□□ -0.31
COL6A6-203ENST00000511332 DMWDQ09019 674 aa13.12□□□□□ -0.31
COL6A6-203ENST00000511332 BYSLQ13895 437 aaKnown RBP13.12□□□□□ -0.31
COL6A6-203ENST00000511332 PAFAH1B3Q15102 231 aaKnown RBP13.12□□□□□ -0.31
COL6A6-203ENST00000511332 DLG2Q15700 870 aa13.12□□□□□ -0.31
COL6A6-203ENST00000511332 ZNF776Q68DI1 518 aaPredicted RBP13.12□□□□□ -0.31
COL6A6-203ENST00000511332 NCBP2-AS2Q69YL0 99 aa13.12□□□□□ -0.31
COL6A6-203ENST00000511332 KIAA1324Q6UXG2 1013 aaKnown RBP13.12□□□□□ -0.31
COL6A6-203ENST00000511332 Q6ZVU0 165 aa13.12□□□□□ -0.31
COL6A6-203ENST00000511332 NT5DC3Q86UY8 548 aa13.12□□□□□ -0.31
COL6A6-203ENST00000511332 CCDC50Q8IVM0 306 aa13.12□□□□□ -0.31
COL6A6-203ENST00000511332 ATPAF2Q8N5M1 289 aa13.12□□□□□ -0.31
COL6A6-203ENST00000511332 PCDH20Q8N6Y1 951 aaKnown RBP13.12□□□□□ -0.31
COL6A6-203ENST00000511332 ZBTB44Q8NCP5 570 aa13.12□□□□□ -0.31
COL6A6-203ENST00000511332 EXD1Q8NHP7 514 aa13.12□□□□□ -0.31
COL6A6-203ENST00000511332 PCDH19Q8TAB3 1148 aa13.12□□□□□ -0.31
COL6A6-203ENST00000511332 FRS2Q8WU20 508 aa13.12□□□□□ -0.31
COL6A6-203ENST00000511332 PRCCQ92733 491 aaPredicted RBP13.12□□□□□ -0.31
COL6A6-203ENST00000511332 MRGPRX1Q96LB2 322 aa13.12□□□□□ -0.31
COL6A6-203ENST00000511332 ZNF830Q96NB3 372 aaPredicted RBP13.12□□□□□ -0.31
COL6A6-203ENST00000511332 RNF157Q96PX1 679 aa13.12□□□□□ -0.31
COL6A6-203ENST00000511332 MAK16Q9BXY0 300 aaKnown RBP13.12□□□□□ -0.31
COL6A6-203ENST00000511332 TPSD1Q9BZJ3 242 aa13.12□□□□□ -0.31
COL6A6-203ENST00000511332 SLC39A8Q9C0K1 460 aa13.12□□□□□ -0.31
COL6A6-203ENST00000511332 KCNF1Q9H3M0 494 aa13.12□□□□□ -0.31
COL6A6-203ENST00000511332 LZTFL1Q9NQ48 299 aa13.12□□□□□ -0.31
COL6A6-203ENST00000511332 PRSS16Q9NQE7 514 aa13.12□□□□□ -0.31
COL6A6-203ENST00000511332 ETNK2Q9NVF9 386 aa13.12□□□□□ -0.31
COL6A6-203ENST00000511332 FARP1Q9Y4F1 1045 aaPredicted RBP13.12□□□□□ -0.31
COL6A6-203ENST00000511332 PCDHA3Q9Y5H8 950 aa13.12□□□□□ -0.31
COL6A6-203ENST00000511332 TNRC6BQ9UPQ9 1833 aaKnown RBP13.11□□□□□ -0.31
COL6A6-203ENST00000511332 THADAQ6YHU6 1953 aa13.11□□□□□ -0.31
COL6A6-203ENST00000511332 APOL1O14791 398 aa13.11□□□□□ -0.31
COL6A6-203ENST00000511332 ZSCAN12O43309 604 aa13.11□□□□□ -0.31
COL6A6-203ENST00000511332 PRAMEF11O60813 436 aa13.11□□□□□ -0.31
COL6A6-203ENST00000511332 ZNF217O75362 1048 aa13.11□□□□□ -0.31
COL6A6-203ENST00000511332 ZRANB2O95218 330 aaKnown RBP eCLIP13.11□□□□□ -0.31
COL6A6-203ENST00000511332 MT-CO1P00395 513 aa13.11□□□□□ -0.31
COL6A6-203ENST00000511332 ACADMP11310 421 aa13.11□□□□□ -0.31
COL6A6-203ENST00000511332 CETN2P41208 172 aa13.11□□□□□ -0.31
COL6A6-203ENST00000511332 CDKN2BP42772 138 aa13.11□□□□□ -0.31
COL6A6-203ENST00000511332 MARCKSL1P49006 195 aa13.11□□□□□ -0.31
COL6A6-203ENST00000511332 PXNP49023 591 aaPredicted RBP13.11□□□□□ -0.31
COL6A6-203ENST00000511332 PAPOLAP51003 745 aaKnown RBP13.11□□□□□ -0.31
COL6A6-203ENST00000511332 RWDD2BP57060 319 aa13.11□□□□□ -0.31
COL6A6-203ENST00000511332 COPS2P61201 443 aa13.11□□□□□ -0.31
COL6A6-203ENST00000511332 ZBTB16Q05516 673 aa13.11□□□□□ -0.31
COL6A6-203ENST00000511332 IL10RBQ08334 325 aa13.11□□□□□ -0.31
COL6A6-203ENST00000511332 TFDP2Q14188 446 aa13.11□□□□□ -0.31
COL6A6-203ENST00000511332 TTC31Q49AM3 519 aaPredicted RBP13.11□□□□□ -0.31
COL6A6-203ENST00000511332 USP39Q53GS9 565 aaKnown RBP13.11□□□□□ -0.31
COL6A6-203ENST00000511332 INO80DQ53TQ3 878 aaPredicted RBP13.11□□□□□ -0.31
COL6A6-203ENST00000511332 TFDP3Q5H9I0 405 aa13.11□□□□□ -0.31
COL6A6-203ENST00000511332 C9orf64Q5T6V5 341 aa13.11□□□□□ -0.31
COL6A6-203ENST00000511332 SPOCD1Q6ZMY3 1216 aa13.11□□□□□ -0.31
COL6A6-203ENST00000511332 C11orf74Q86VG3 221 aa13.11□□□□□ -0.31
COL6A6-203ENST00000511332 RFX6Q8HWS3 928 aa13.11□□□□□ -0.31
COL6A6-203ENST00000511332 TMPRSS6Q8IU80 811 aa13.11□□□□□ -0.31
COL6A6-203ENST00000511332 LRRC49Q8IUZ0 686 aa13.11□□□□□ -0.31
COL6A6-203ENST00000511332 RCOR2Q8IZ40 523 aa13.11□□□□□ -0.31
COL6A6-203ENST00000511332 OR8D1Q8WZ84 308 aa13.11□□□□□ -0.31
COL6A6-203ENST00000511332 KRT35Q92764 455 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms