RNA–Protein interactions for RNA: ENST00000510541.5

CLDND1-221, Transcript of claudin domain containing 1, humanhuman

TSL 4

Gene CLDND1, Length 573 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-221ENST00000510541 MAGEA1P43355 309 aa17.64■□□□□ 0.41
CLDND1-221ENST00000510541 ARF5P84085 180 aa17.64■□□□□ 0.41
CLDND1-221ENST00000510541 FAM46CQ5VWP2 391 aa17.64■□□□□ 0.41
CLDND1-221ENST00000510541 RABEPKQ7Z6M1 372 aa17.64■□□□□ 0.41
CLDND1-221ENST00000510541 TMEM139Q8IV31 216 aa17.64■□□□□ 0.41
CLDND1-221ENST00000510541 MAP7D3Q8IWC1 876 aa17.64■□□□□ 0.41
CLDND1-221ENST00000510541 PGBD3Q8N328 593 aa17.64■□□□□ 0.41
CLDND1-221ENST00000510541 TXLNBQ8N3L3 684 aa17.64■□□□□ 0.41
CLDND1-221ENST00000510541 FAF2Q96CS3 445 aa17.64■□□□□ 0.41
CLDND1-221ENST00000510541 RPL10LQ96L21 214 aaKnown RBP17.64■□□□□ 0.41
CLDND1-221ENST00000510541 KCTD15Q96SI1 283 aaPredicted RBP17.64■□□□□ 0.41
CLDND1-221ENST00000510541 ZNF670Q9BS34 389 aa17.64■□□□□ 0.41
CLDND1-221ENST00000510541 MAGEB5Q9BZ81 275 aa17.64■□□□□ 0.41
CLDND1-221ENST00000510541 TPSD1Q9BZJ3 242 aa17.64■□□□□ 0.41
CLDND1-221ENST00000510541 SGK2Q9HBY8 427 aa17.64■□□□□ 0.41
CLDND1-221ENST00000510541 CWC15Q9P013 229 aaKnown RBP17.64■□□□□ 0.41
CLDND1-221ENST00000510541 MBD1Q9UIS9 605 aaPredicted RBP17.64■□□□□ 0.41
CLDND1-221ENST00000510541 PPM1HQ9ULR3 514 aa17.64■□□□□ 0.41
CLDND1-221ENST00000510541 ABCA7Q8IZY2 2146 aa17.63■□□□□ 0.41
CLDND1-221ENST00000510541 ZNF821O75541 412 aaPredicted RBP17.63■□□□□ 0.41
CLDND1-221ENST00000510541 IPO7O95373 1038 aaKnown RBP17.63■□□□□ 0.41
CLDND1-221ENST00000510541 DNTTP04053 509 aa17.63■□□□□ 0.41
CLDND1-221ENST00000510541 ERCC2P18074 760 aa17.63■□□□□ 0.41
CLDND1-221ENST00000510541 TGM1P22735 817 aa17.63■□□□□ 0.41
CLDND1-221ENST00000510541 CCDC15Q0P6D6 951 aa17.63■□□□□ 0.41
CLDND1-221ENST00000510541 RFTN1Q14699 578 aaPredicted RBP17.63■□□□□ 0.41
CLDND1-221ENST00000510541 CST6Q15828 149 aa17.63■□□□□ 0.41
CLDND1-221ENST00000510541 CA9Q16790 459 aa17.63■□□□□ 0.41
CLDND1-221ENST00000510541 OR7D4Q8NG98 312 aa17.63■□□□□ 0.41
CLDND1-221ENST00000510541 OR2A12Q8NGT7 310 aa17.63■□□□□ 0.41
CLDND1-221ENST00000510541 DNASE2BQ8WZ79 361 aa17.63■□□□□ 0.41
CLDND1-221ENST00000510541 OR8D1Q8WZ84 308 aa17.63■□□□□ 0.41
CLDND1-221ENST00000510541 FATE1Q969F0 183 aa17.63■□□□□ 0.41
CLDND1-221ENST00000510541 PABPC3Q9H361 631 aaKnown RBP17.63■□□□□ 0.41
CLDND1-221ENST00000510541 OSGEPQ9NPF4 335 aa17.63■□□□□ 0.41
CLDND1-221ENST00000510541 MFHAS1Q9Y4C4 1052 aa17.63■□□□□ 0.41
CLDND1-221ENST00000510541 PCDHA13Q9Y5I0 950 aa17.63■□□□□ 0.41
CLDND1-221ENST00000510541 NYNRINQ9P2P1 1898 aaKnown RBP17.63■□□□□ 0.41
CLDND1-221ENST00000510541 BCLAF3A2AJT9 711 aaKnown RBP17.62■□□□□ 0.41
CLDND1-221ENST00000510541 ARHGAP42A6NI28 874 aa17.62■□□□□ 0.41
CLDND1-221ENST00000510541 RASA4BC9J798 803 aa17.62■□□□□ 0.41
CLDND1-221ENST00000510541 DCLK1O15075 740 aa17.62■□□□□ 0.41
CLDND1-221ENST00000510541 PJA2O43164 708 aa17.62■□□□□ 0.41
CLDND1-221ENST00000510541 RASA4O43374 803 aa17.62■□□□□ 0.41
CLDND1-221ENST00000510541 SNAP91O60641 907 aa17.62■□□□□ 0.41
CLDND1-221ENST00000510541 GSRP00390 522 aa17.62■□□□□ 0.41
CLDND1-221ENST00000510541 MT-CO1P00395 513 aa17.62■□□□□ 0.41
CLDND1-221ENST00000510541 ZNF806P0C7X5 589 aa17.62■□□□□ 0.41
CLDND1-221ENST00000510541 GOT1P17174 413 aa17.62■□□□□ 0.41
CLDND1-221ENST00000510541 IL4RP24394 825 aa17.62■□□□□ 0.41
CLDND1-221ENST00000510541 SERPINB6P35237 376 aa17.62■□□□□ 0.41
CLDND1-221ENST00000510541 STK19P49842 368 aaPredicted RBP17.62■□□□□ 0.41
CLDND1-221ENST00000510541 SRSF5Q13243 272 aaKnown RBP17.62■□□□□ 0.41
CLDND1-221ENST00000510541 CSRP2Q16527 193 aa17.62■□□□□ 0.41
CLDND1-221ENST00000510541 IL31Q6EBC2 164 aa17.62■□□□□ 0.41
CLDND1-221ENST00000510541 C22orf39Q6P5X5 142 aa17.62■□□□□ 0.41
CLDND1-221ENST00000510541 ZSCAN30Q86W11 494 aa17.62■□□□□ 0.41
CLDND1-221ENST00000510541 ATP11CQ8NB49 1132 aa17.62■□□□□ 0.41
CLDND1-221ENST00000510541 ZNF599Q96NL3 588 aa17.62■□□□□ 0.41
CLDND1-221ENST00000510541 CSPG4P5Q96PW8 444 aa17.62■□□□□ 0.41
CLDND1-221ENST00000510541 BAG1Q99933 345 aaPredicted RBP17.62■□□□□ 0.41
CLDND1-221ENST00000510541 PCDH18Q9HCL0 1135 aa17.62■□□□□ 0.41
CLDND1-221ENST00000510541 STAU2Q9NUL3 570 aaKnown RBP eCLIP17.62■□□□□ 0.41
CLDND1-221ENST00000510541 EVLQ9UI08 416 aaPredicted RBP17.62■□□□□ 0.41
CLDND1-221ENST00000510541 DNAI1Q9UI46 699 aa17.62■□□□□ 0.41
CLDND1-221ENST00000510541 TNRC6BQ9UPQ9 1833 aaKnown RBP17.61■□□□□ 0.41
CLDND1-221ENST00000510541 C1QTNF3-AMACRE9PGA6 284 aa17.61■□□□□ 0.41
CLDND1-221ENST00000510541 CBX4O00257 560 aa17.61■□□□□ 0.41
CLDND1-221ENST00000510541 PRNPP04156 253 aa17.61■□□□□ 0.41
CLDND1-221ENST00000510541 NUDT1P36639 197 aa17.61■□□□□ 0.41
CLDND1-221ENST00000510541 CSNK1DP48730 415 aa17.61■□□□□ 0.41
CLDND1-221ENST00000510541 GRM3Q14832 879 aa17.61■□□□□ 0.41
CLDND1-221ENST00000510541 C11orf63Q6NUN7 778 aa17.61■□□□□ 0.41
CLDND1-221ENST00000510541 PRR23BQ6ZRT6 265 aa17.61■□□□□ 0.41
CLDND1-221ENST00000510541 ARHGAP12Q8IWW6 846 aa17.61■□□□□ 0.41
CLDND1-221ENST00000510541 CEP76Q8TAP6 659 aa17.61■□□□□ 0.41
CLDND1-221ENST00000510541 HCAR2Q8TDS4 363 aa17.61■□□□□ 0.41
CLDND1-221ENST00000510541 BTBD6Q96KE9 485 aa17.61■□□□□ 0.41
CLDND1-221ENST00000510541 PDFQ9HBH1 243 aa17.61■□□□□ 0.41
CLDND1-221ENST00000510541 VPS45Q9NRW7 570 aa17.61■□□□□ 0.41
CLDND1-221ENST00000510541 NCDNQ9UBB6 729 aa17.61■□□□□ 0.41
CLDND1-221ENST00000510541 NCKAP1Q9Y2A7 1128 aa17.61■□□□□ 0.41
CLDND1-221ENST00000510541 THADAQ6YHU6 1953 aa17.6■□□□□ 0.41
CLDND1-221ENST00000510541 NUP205Q92621 2012 aa17.6■□□□□ 0.41
CLDND1-221ENST00000510541 METTL12A8MUP2 240 aa17.6■□□□□ 0.41
CLDND1-221ENST00000510541 DAPK3O43293 454 aa17.6■□□□□ 0.41
CLDND1-221ENST00000510541 PRAMEF11O60813 436 aa17.6■□□□□ 0.41
CLDND1-221ENST00000510541 TCF4P15884 667 aa17.6■□□□□ 0.41
CLDND1-221ENST00000510541 BCKDHBP21953 392 aa17.6■□□□□ 0.41
CLDND1-221ENST00000510541 ACVRL1P37023 503 aa17.6■□□□□ 0.41
CLDND1-221ENST00000510541 NSUN2Q08J23 767 aaKnown RBP eCLIP17.6■□□□□ 0.41
CLDND1-221ENST00000510541 NEK5Q6P3R8 708 aa17.6■□□□□ 0.41
CLDND1-221ENST00000510541 KIAA1324Q6UXG2 1013 aaKnown RBP17.6■□□□□ 0.41
CLDND1-221ENST00000510541 ALYREFQ86V81 257 aaKnown RBP17.6■□□□□ 0.41
CLDND1-221ENST00000510541 SYT12Q8IV01 421 aa17.6■□□□□ 0.41
CLDND1-221ENST00000510541 CCDC112Q8NEF3 446 aa17.6■□□□□ 0.41
CLDND1-221ENST00000510541 SPOCK2Q92563 424 aa17.6■□□□□ 0.41
CLDND1-221ENST00000510541 TOE1Q96GM8 510 aaKnown RBP17.6■□□□□ 0.41
CLDND1-221ENST00000510541 SPON2Q9BUD6 331 aa17.6■□□□□ 0.41
CLDND1-221ENST00000510541 HDAC8Q9BY41 377 aa17.6■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 61.8 ms