RNA–Protein interactions for RNA: ENST00000509995.5

SNF8-207, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 3

Gene SNF8, Length 560 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-207ENST00000509995 YWHAGP61981 247 aaKnown RBP eCLIP11.1□□□□□ -0.63
SNF8-207ENST00000509995 CDH18Q13634 790 aa11.1□□□□□ -0.63
SNF8-207ENST00000509995 ALCAMQ13740 583 aa11.1□□□□□ -0.63
SNF8-207ENST00000509995 PDE1CQ14123 709 aaPredicted RBP11.1□□□□□ -0.63
SNF8-207ENST00000509995 DEFB109BQ30KR1 87 aa11.1□□□□□ -0.63
SNF8-207ENST00000509995 FAM133BQ5BKY9 247 aaKnown RBP11.1□□□□□ -0.63
SNF8-207ENST00000509995 PRRT3Q5FWE3 981 aa11.1□□□□□ -0.63
SNF8-207ENST00000509995 FSCBQ5H9T9 825 aa11.1□□□□□ -0.63
SNF8-207ENST00000509995 SEL1L3Q68CR1 1132 aa11.1□□□□□ -0.63
SNF8-207ENST00000509995 ASB18Q6ZVZ8 466 aa11.1□□□□□ -0.63
SNF8-207ENST00000509995 HJURPQ8NCD3 748 aaPredicted RBP11.1□□□□□ -0.63
SNF8-207ENST00000509995 FRS2Q8WU20 508 aa11.1□□□□□ -0.63
SNF8-207ENST00000509995 BTN2A2Q8WVV5 523 aa11.1□□□□□ -0.63
SNF8-207ENST00000509995 ELMO3Q96BJ8 720 aa11.1□□□□□ -0.63
SNF8-207ENST00000509995 PRICKLE1Q96MT3 831 aaPredicted RBP11.1□□□□□ -0.63
SNF8-207ENST00000509995 LRRC61Q9BV99 259 aa11.1□□□□□ -0.63
SNF8-207ENST00000509995 FGFBP2Q9BYJ0 223 aa11.1□□□□□ -0.63
SNF8-207ENST00000509995 TCEAL2Q9H3H9 227 aaPredicted RBP11.1□□□□□ -0.63
SNF8-207ENST00000509995 OLFML3Q9NRN5 406 aa11.1□□□□□ -0.63
SNF8-207ENST00000509995 OLA1Q9NTK5 396 aaKnown RBP11.1□□□□□ -0.63
SNF8-207ENST00000509995 PPM1HQ9ULR3 514 aa11.1□□□□□ -0.63
SNF8-207ENST00000509995 ZFR2Q9UPR6 939 aaKnown RBP11.1□□□□□ -0.63
SNF8-207ENST00000509995 DAAM1Q9Y4D1 1078 aa11.1□□□□□ -0.63
SNF8-207ENST00000509995 DIDO1Q9BTC0 2240 aaKnown RBP11.09□□□□□ -0.63
SNF8-207ENST00000509995 YY2O15391 372 aa11.09□□□□□ -0.63
SNF8-207ENST00000509995 SPINT1O43278 529 aa11.09□□□□□ -0.63
SNF8-207ENST00000509995 DIAPH2O60879 1101 aa11.09□□□□□ -0.63
SNF8-207ENST00000509995 MOCS3O95396 460 aa11.09□□□□□ -0.63
SNF8-207ENST00000509995 NNMTP40261 264 aa11.09□□□□□ -0.63
SNF8-207ENST00000509995 RECQLP46063 649 aaPredicted RBP11.09□□□□□ -0.63
SNF8-207ENST00000509995 EIF2B5Q13144 721 aaKnown RBP11.09□□□□□ -0.63
SNF8-207ENST00000509995 MRPL49Q13405 166 aaKnown RBP11.09□□□□□ -0.63
SNF8-207ENST00000509995 C1orf61Q13536 156 aa11.09□□□□□ -0.63
SNF8-207ENST00000509995 PSMD6Q15008 389 aa11.09□□□□□ -0.63
SNF8-207ENST00000509995 SNRNP35Q16560 246 aaKnown RBP11.09□□□□□ -0.63
SNF8-207ENST00000509995 TMEM259Q4ZIN3 620 aa11.09□□□□□ -0.63
SNF8-207ENST00000509995 TPRG1LQ5T0D9 272 aa11.09□□□□□ -0.63
SNF8-207ENST00000509995 ARL6IP4Q66PJ3 421 aaKnown RBP11.09□□□□□ -0.63
SNF8-207ENST00000509995 UNC93AQ86WB7 457 aa11.09□□□□□ -0.63
SNF8-207ENST00000509995 CCNJLQ8IV13 435 aa11.09□□□□□ -0.63
SNF8-207ENST00000509995 SLITRK4Q8IW52 837 aa11.09□□□□□ -0.63
SNF8-207ENST00000509995 CCDC13Q8IYE1 715 aa11.09□□□□□ -0.63
SNF8-207ENST00000509995 CACNA2D3Q8IZS8 1091 aa11.09□□□□□ -0.63
SNF8-207ENST00000509995 CARNMT1Q8N4J0 409 aa11.09□□□□□ -0.63
SNF8-207ENST00000509995 RASSF8Q8NHQ8 419 aa11.09□□□□□ -0.63
SNF8-207ENST00000509995 PRR7Q8TB68 274 aa11.09□□□□□ -0.63
SNF8-207ENST00000509995 ZNF516Q92618 1163 aa11.09□□□□□ -0.63
SNF8-207ENST00000509995 PMEPA1Q969W9 287 aa11.09□□□□□ -0.63
SNF8-207ENST00000509995 CCDC127Q96BQ5 260 aa11.09□□□□□ -0.63
SNF8-207ENST00000509995 CYFIP2Q96F07 1278 aa11.09□□□□□ -0.63
SNF8-207ENST00000509995 TBATAQ96M53 351 aa11.09□□□□□ -0.63
SNF8-207ENST00000509995 UNKQ9C0B0 810 aaKnown RBP11.09□□□□□ -0.63
SNF8-207ENST00000509995 KIAA1586Q9HCI6 787 aa11.09□□□□□ -0.63
SNF8-207ENST00000509995 GULP1Q9UBP9 304 aa11.09□□□□□ -0.63
SNF8-207ENST00000509995 SFMBT1Q9UHJ3 866 aa11.09□□□□□ -0.63
SNF8-207ENST00000509995 IPO11Q9UI26 975 aaKnown RBP11.09□□□□□ -0.63
SNF8-207ENST00000509995 GGT7Q9UJ14 662 aa11.09□□□□□ -0.63
SNF8-207ENST00000509995 NAALADL1Q9UQQ1 740 aa11.09□□□□□ -0.63
SNF8-207ENST00000509995 RNF215Q9Y6U7 377 aa11.09□□□□□ -0.63
SNF8-207ENST00000509995 TACC2O95359 2948 aa11.09□□□□□ -0.63
SNF8-207ENST00000509995 TNRC6AQ8NDV7 1962 aaKnown RBP11.08□□□□□ -0.64
SNF8-207ENST00000509995 GOLGA6L7A0A1B0GV03 622 aa11.08□□□□□ -0.64
SNF8-207ENST00000509995 ARHGAP10A1A4S6 786 aa11.08□□□□□ -0.64
SNF8-207ENST00000509995 TYW5A2RUC4 315 aaKnown RBP11.08□□□□□ -0.64
SNF8-207ENST00000509995 MKRN2OSH3BPM6 223 aa11.08□□□□□ -0.64
SNF8-207ENST00000509995 MSI1O43347 362 aaKnown RBP11.08□□□□□ -0.64
SNF8-207ENST00000509995 KIF20AO95235 890 aa11.08□□□□□ -0.64
SNF8-207ENST00000509995 TRIM21P19474 475 aaKnown RBP11.08□□□□□ -0.64
SNF8-207ENST00000509995 RPS24P62847 133 aaKnown RBP11.08□□□□□ -0.64
SNF8-207ENST00000509995 CYP24A1Q07973 514 aa11.08□□□□□ -0.64
SNF8-207ENST00000509995 C16orf72Q14CZ0 275 aa11.08□□□□□ -0.64
SNF8-207ENST00000509995 PHF19Q5T6S3 580 aa11.08□□□□□ -0.64
SNF8-207ENST00000509995 APCDD1Q8J025 514 aa11.08□□□□□ -0.64
SNF8-207ENST00000509995 TWNKQ96RR1 684 aa11.08□□□□□ -0.64
SNF8-207ENST00000509995 DUSP16Q9BY84 665 aa11.08□□□□□ -0.64
SNF8-207ENST00000509995 CLPBQ9H078 707 aa11.08□□□□□ -0.64
SNF8-207ENST00000509995 SIRPGQ9P1W8 387 aa11.08□□□□□ -0.64
SNF8-207ENST00000509995 MAP4K5Q9Y4K4 846 aa11.08□□□□□ -0.64
SNF8-207ENST00000509995 PCDHGA3Q9Y5H0 932 aa11.08□□□□□ -0.64
SNF8-207ENST00000509995 TCP11X1B4DZS4 312 aa11.07□□□□□ -0.64
SNF8-207ENST00000509995 ALOX15BO15296 676 aa11.07□□□□□ -0.64
SNF8-207ENST00000509995 RAD51BO15315 384 aa11.07□□□□□ -0.64
SNF8-207ENST00000509995 PHACTR2O75167 634 aa11.07□□□□□ -0.64
SNF8-207ENST00000509995 PCDH8O95206 1070 aa11.07□□□□□ -0.64
SNF8-207ENST00000509995 CCL4P13236 92 aa11.07□□□□□ -0.64
SNF8-207ENST00000509995 TSHRP16473 764 aa11.07□□□□□ -0.64
SNF8-207ENST00000509995 ZXDCQ2QGD7 858 aaPredicted RBP11.07□□□□□ -0.64
SNF8-207ENST00000509995 CCDC117Q8IWD4 279 aaPredicted RBP11.07□□□□□ -0.64
SNF8-207ENST00000509995 MCEMP1Q8IX19 187 aa11.07□□□□□ -0.64
SNF8-207ENST00000509995 PHACTR4Q8IZ21 702 aa11.07□□□□□ -0.64
SNF8-207ENST00000509995 PCDH19Q8TAB3 1148 aa11.07□□□□□ -0.64
SNF8-207ENST00000509995 MYEOVQ96EZ4 313 aa11.07□□□□□ -0.64
SNF8-207ENST00000509995 GPN2Q9H9Y4 310 aaPredicted RBP11.07□□□□□ -0.64
SNF8-207ENST00000509995 AKAP7Q9P0M2 348 aaPredicted RBP11.07□□□□□ -0.64
SNF8-207ENST00000509995 PNMA8BQ9ULN7 279 aaPredicted RBP11.07□□□□□ -0.64
SNF8-207ENST00000509995 PHTF1Q9UMS5 762 aa11.07□□□□□ -0.64
SNF8-207ENST00000509995 ENTPD4Q9Y227 616 aa11.07□□□□□ -0.64
SNF8-207ENST00000509995 KCTD3Q9Y597 815 aa11.07□□□□□ -0.64
SNF8-207ENST00000509995 CROCCQ5TZA2 2017 aa11.07□□□□□ -0.64
SNF8-207ENST00000509995 DCHS2Q6V1P9 2916 aa11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms