RNA–Protein interactions for RNA: ENST00000509333.5

PDLIM5-212, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2

Gene PDLIM5, Length 743 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-212ENST00000509333 TTC31Q49AM3 519 aaPredicted RBP16.5■□□□□ 0.23
PDLIM5-212ENST00000509333 CCDC122Q5T0U0 273 aa16.5■□□□□ 0.23
PDLIM5-212ENST00000509333 ERMARDQ5T6L9 678 aa16.5■□□□□ 0.23
PDLIM5-212ENST00000509333 RETSATQ6NUM9 610 aa16.5■□□□□ 0.23
PDLIM5-212ENST00000509333 Q6ZVU0 165 aa16.5■□□□□ 0.23
PDLIM5-212ENST00000509333 DGLUCYQ7Z3D6 616 aa16.5■□□□□ 0.23
PDLIM5-212ENST00000509333 HDDC3Q8N4P3 179 aa16.5■□□□□ 0.23
PDLIM5-212ENST00000509333 OR2A12Q8NGT7 310 aa16.5■□□□□ 0.23
PDLIM5-212ENST00000509333 GANCQ8TET4 914 aa16.5■□□□□ 0.23
PDLIM5-212ENST00000509333 TRIM11Q96F44 468 aa16.5■□□□□ 0.23
PDLIM5-212ENST00000509333 DNAJC7Q99615 494 aa16.5■□□□□ 0.23
PDLIM5-212ENST00000509333 NUSAP1Q9BXS6 441 aaKnown RBP16.5■□□□□ 0.23
PDLIM5-212ENST00000509333 ATP13A1Q9HD20 1204 aa16.5■□□□□ 0.23
PDLIM5-212ENST00000509333 PCSK1NQ9UHG2 260 aa16.5■□□□□ 0.23
PDLIM5-212ENST00000509333 EIF2B4Q9UI10 523 aaKnown RBP16.5■□□□□ 0.23
PDLIM5-212ENST00000509333 ATXN2Q99700 1313 aaKnown RBP16.49■□□□□ 0.23
PDLIM5-212ENST00000509333 CACNA1AO00555 2505 aa16.49■□□□□ 0.23
PDLIM5-212ENST00000509333 KDELR3O43731 214 aa16.49■□□□□ 0.23
PDLIM5-212ENST00000509333 CREB3O43889 395 aa16.49■□□□□ 0.23
PDLIM5-212ENST00000509333 RNF8O76064 485 aa16.49■□□□□ 0.23
PDLIM5-212ENST00000509333 CYP1A2P05177 515 aa16.49■□□□□ 0.23
PDLIM5-212ENST00000509333 EPHB2P29323 1055 aa16.49■□□□□ 0.23
PDLIM5-212ENST00000509333 CLCN6P51797 869 aa16.49■□□□□ 0.23
PDLIM5-212ENST00000509333 METAP1P53582 386 aa16.49■□□□□ 0.23
PDLIM5-212ENST00000509333 ACAP1Q15027 740 aa16.49■□□□□ 0.23
PDLIM5-212ENST00000509333 CACNA1EQ15878 2313 aa16.49■□□□□ 0.23
PDLIM5-212ENST00000509333 CA9Q16790 459 aa16.49■□□□□ 0.23
PDLIM5-212ENST00000509333 IL31Q6EBC2 164 aa16.49■□□□□ 0.23
PDLIM5-212ENST00000509333 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP16.49■□□□□ 0.23
PDLIM5-212ENST00000509333 CYP4V2Q6ZWL3 525 aaPredicted RBP16.49■□□□□ 0.23
PDLIM5-212ENST00000509333 ERMP1Q7Z2K6 904 aa16.49■□□□□ 0.23
PDLIM5-212ENST00000509333 RTL3Q8N8U3 475 aaKnown RBP16.49■□□□□ 0.23
PDLIM5-212ENST00000509333 TMIEQ8NEW7 156 aa16.49■□□□□ 0.23
PDLIM5-212ENST00000509333 OR8D1Q8WZ84 308 aa16.49■□□□□ 0.23
PDLIM5-212ENST00000509333 FAM131CQ96AQ9 280 aa16.49■□□□□ 0.23
PDLIM5-212ENST00000509333 PEBP4Q96S96 227 aa16.49■□□□□ 0.23
PDLIM5-212ENST00000509333 OMDQ99983 421 aa16.49■□□□□ 0.23
PDLIM5-212ENST00000509333 ORAI3Q9BRQ5 295 aa16.49■□□□□ 0.23
PDLIM5-212ENST00000509333 EDEM2Q9BV94 578 aa16.49■□□□□ 0.23
PDLIM5-212ENST00000509333 THAP2Q9H0W7 228 aa16.49■□□□□ 0.23
PDLIM5-212ENST00000509333 FSCN3Q9NQT6 498 aa16.49■□□□□ 0.23
PDLIM5-212ENST00000509333 GPATCH2LQ9NWQ4 482 aa16.49■□□□□ 0.23
PDLIM5-212ENST00000509333 FZD4Q9ULV1 537 aa16.49■□□□□ 0.23
PDLIM5-212ENST00000509333 ZBTB32Q9Y2Y4 487 aaPredicted RBP16.49■□□□□ 0.23
PDLIM5-212ENST00000509333 ACTL7AQ9Y615 435 aa16.49■□□□□ 0.23
PDLIM5-212ENST00000509333 SCINQ9Y6U3 715 aa16.49■□□□□ 0.23
PDLIM5-212ENST00000509333 TNRC6BQ9UPQ9 1833 aaKnown RBP16.49■□□□□ 0.23
PDLIM5-212ENST00000509333 ASCC3Q8N3C0 2202 aaKnown RBP16.48■□□□□ 0.23
PDLIM5-212ENST00000509333 RNF103O00237 685 aa16.48■□□□□ 0.23
PDLIM5-212ENST00000509333 ALOX15BO15296 676 aa16.48■□□□□ 0.23
PDLIM5-212ENST00000509333 RNASEH2AO75792 299 aaKnown RBP16.48■□□□□ 0.23
PDLIM5-212ENST00000509333 ADH1BP00325 375 aa16.48■□□□□ 0.23
PDLIM5-212ENST00000509333 CFIP05156 583 aa16.48■□□□□ 0.23
PDLIM5-212ENST00000509333 GNSP15586 552 aa16.48■□□□□ 0.23
PDLIM5-212ENST00000509333 ENGP17813 658 aa16.48■□□□□ 0.23
PDLIM5-212ENST00000509333 CHRNA3P32297 505 aa16.48■□□□□ 0.23
PDLIM5-212ENST00000509333 DRD3P35462 400 aa16.48■□□□□ 0.23
PDLIM5-212ENST00000509333 ETFBP38117 255 aa16.48■□□□□ 0.23
PDLIM5-212ENST00000509333 PSMD8P48556 350 aa16.48■□□□□ 0.23
PDLIM5-212ENST00000509333 YBEYP58557 167 aaPredicted RBP16.48■□□□□ 0.23
PDLIM5-212ENST00000509333 GFPT1Q06210 699 aaPredicted RBP16.48■□□□□ 0.23
PDLIM5-212ENST00000509333 POLD3Q15054 466 aaPredicted RBP16.48■□□□□ 0.23
PDLIM5-212ENST00000509333 FAM46CQ5VWP2 391 aa16.48■□□□□ 0.23
PDLIM5-212ENST00000509333 RABEPKQ7Z6M1 372 aa16.48■□□□□ 0.23
PDLIM5-212ENST00000509333 DSG4Q86SJ6 1040 aa16.48■□□□□ 0.23
PDLIM5-212ENST00000509333 PLPP6Q8IY26 295 aa16.48■□□□□ 0.23
PDLIM5-212ENST00000509333 UMODL1-AS1Q8N2C9 162 aa16.48■□□□□ 0.23
PDLIM5-212ENST00000509333 CHST14Q8NCH0 376 aa16.48■□□□□ 0.23
PDLIM5-212ENST00000509333 PIP4K2CQ8TBX8 421 aa16.48■□□□□ 0.23
PDLIM5-212ENST00000509333 BIRC7Q96CA5 298 aa16.48■□□□□ 0.23
PDLIM5-212ENST00000509333 CHP1Q99653 195 aa16.48■□□□□ 0.23
PDLIM5-212ENST00000509333 EPAS1Q99814 870 aa16.48■□□□□ 0.23
PDLIM5-212ENST00000509333 NCAPGQ9BPX3 1015 aa16.48■□□□□ 0.23
PDLIM5-212ENST00000509333 TMEM9BQ9NQ34 198 aa16.48■□□□□ 0.23
PDLIM5-212ENST00000509333 SUSD2Q9UGT4 822 aa16.48■□□□□ 0.23
PDLIM5-212ENST00000509333 SLCO1B1Q9Y6L6 691 aa16.48■□□□□ 0.23
PDLIM5-212ENST00000509333 PCNX2A6NKB5 2137 aa16.48■□□□□ 0.23
PDLIM5-212ENST00000509333 A0A1B0GTW7 788 aa16.47■□□□□ 0.23
PDLIM5-212ENST00000509333 MEI4A8MW99 385 aa16.47■□□□□ 0.23
PDLIM5-212ENST00000509333 EIF3CLB5ME19 914 aaKnown RBP16.47■□□□□ 0.23
PDLIM5-212ENST00000509333 PLK4O00444 970 aa16.47■□□□□ 0.23
PDLIM5-212ENST00000509333 ARHGAP33O14559 1287 aa16.47■□□□□ 0.23
PDLIM5-212ENST00000509333 BCAT2O15382 392 aaPredicted RBP16.47■□□□□ 0.23
PDLIM5-212ENST00000509333 BNIP3LO60238 219 aa16.47■□□□□ 0.23
PDLIM5-212ENST00000509333 RAMP2O60895 175 aa16.47■□□□□ 0.23
PDLIM5-212ENST00000509333 LRCH4O75427 683 aa16.47■□□□□ 0.23
PDLIM5-212ENST00000509333 IGHV4-34P06331 123 aa16.47■□□□□ 0.23
PDLIM5-212ENST00000509333 CTSLP07711 333 aa16.47■□□□□ 0.23
PDLIM5-212ENST00000509333 DESP17661 470 aa16.47■□□□□ 0.23
PDLIM5-212ENST00000509333 HTR7P34969 479 aa16.47■□□□□ 0.23
PDLIM5-212ENST00000509333 PCK1P35558 622 aa16.47■□□□□ 0.23
PDLIM5-212ENST00000509333 HCAR3P49019 387 aa16.47■□□□□ 0.23
PDLIM5-212ENST00000509333 SERPINH1P50454 418 aaKnown RBP16.47■□□□□ 0.23
PDLIM5-212ENST00000509333 ADKP55263 362 aaKnown RBP16.47■□□□□ 0.23
PDLIM5-212ENST00000509333 TBX2Q13207 712 aaPredicted RBP16.47■□□□□ 0.23
PDLIM5-212ENST00000509333 TRIM14Q14142 442 aa16.47■□□□□ 0.23
PDLIM5-212ENST00000509333 BOLA3Q53S33 107 aa16.47■□□□□ 0.23
PDLIM5-212ENST00000509333 CARD16Q5EG05 197 aa16.47■□□□□ 0.23
PDLIM5-212ENST00000509333 KIAA0895LQ68EN5 471 aa16.47■□□□□ 0.23
PDLIM5-212ENST00000509333 NCEH1Q6PIU2 408 aa16.47■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms