RNA–Protein interactions for RNA: ENST00000508740.5

NR1I3-226, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best) BASIC

Gene NR1I3, Length 977 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-226ENST00000508740 RAP1GAP2Q684P5 730 aa8.12□□□□□ -1.11
NR1I3-226ENST00000508740 STEAP4Q687X5 459 aa8.12□□□□□ -1.11
NR1I3-226ENST00000508740 KCTD11Q693B1 232 aa8.12□□□□□ -1.11
NR1I3-226ENST00000508740 NADSYN1Q6IA69 706 aa8.12□□□□□ -1.11
NR1I3-226ENST00000508740 TIGD7Q6NT04 549 aaPredicted RBP8.12□□□□□ -1.11
NR1I3-226ENST00000508740 OTOP3Q7RTS5 596 aa8.12□□□□□ -1.11
NR1I3-226ENST00000508740 DNAJB7Q7Z6W7 309 aaPredicted RBP8.12□□□□□ -1.11
NR1I3-226ENST00000508740 PRPF39Q86UA1 669 aaKnown RBP8.12□□□□□ -1.11
NR1I3-226ENST00000508740 CCNJLQ8IV13 435 aa8.12□□□□□ -1.11
NR1I3-226ENST00000508740 KLHDC8BQ8IXV7 354 aa8.12□□□□□ -1.11
NR1I3-226ENST00000508740 SRRM1Q8IYB3 904 aaKnown RBP8.12□□□□□ -1.11
NR1I3-226ENST00000508740 TCEAL8Q8IYN2 117 aa8.12□□□□□ -1.11
NR1I3-226ENST00000508740 FIBCD1Q8N539 461 aa8.12□□□□□ -1.11
NR1I3-226ENST00000508740 CNTD1Q8N815 330 aa8.12□□□□□ -1.11
NR1I3-226ENST00000508740 BCAS4Q8TDM0 211 aa8.12□□□□□ -1.11
NR1I3-226ENST00000508740 USP33Q8TEY7 942 aa8.12□□□□□ -1.11
NR1I3-226ENST00000508740 AUTS2Q8WXX7 1259 aa8.12□□□□□ -1.11
NR1I3-226ENST00000508740 FATE1Q969F0 183 aa8.12□□□□□ -1.11
NR1I3-226ENST00000508740 AZIN2Q96A70 460 aa8.12□□□□□ -1.11
NR1I3-226ENST00000508740 STAMBPL1Q96FJ0 436 aa8.12□□□□□ -1.11
NR1I3-226ENST00000508740 TRMT2BQ96GJ1 504 aaKnown RBP8.12□□□□□ -1.11
NR1I3-226ENST00000508740 FCRL5Q96RD9 977 aa8.12□□□□□ -1.11
NR1I3-226ENST00000508740 NAT9Q9BTE0 207 aa8.12□□□□□ -1.11
NR1I3-226ENST00000508740 MLPHQ9BV36 600 aaPredicted RBP8.12□□□□□ -1.11
NR1I3-226ENST00000508740 TRABDQ9H4I3 376 aa8.12□□□□□ -1.11
NR1I3-226ENST00000508740 CCDC134Q9H6E4 229 aa8.12□□□□□ -1.11
NR1I3-226ENST00000508740 NOL6Q9H6R4 1146 aaKnown RBP8.12□□□□□ -1.11
NR1I3-226ENST00000508740 PPANQ9NQ55 473 aaKnown RBP8.12□□□□□ -1.11
NR1I3-226ENST00000508740 CASS4Q9NQ75 786 aa8.12□□□□□ -1.11
NR1I3-226ENST00000508740 IPO11Q9UI26 975 aaKnown RBP8.12□□□□□ -1.11
NR1I3-226ENST00000508740 SSX2IPQ9Y2D8 614 aa8.12□□□□□ -1.11
NR1I3-226ENST00000508740 MYO9BQ13459 2157 aa8.11□□□□□ -1.11
NR1I3-226ENST00000508740 IQANK1A0A1B0GTG1 560 aa8.11□□□□□ -1.11
NR1I3-226ENST00000508740 GOLGA6L7A0A1B0GV03 622 aa8.11□□□□□ -1.11
NR1I3-226ENST00000508740 A0A1W2PPM1 405 aa8.11□□□□□ -1.11
NR1I3-226ENST00000508740 FAM47DPA6NHR8 397 aa8.11□□□□□ -1.11
NR1I3-226ENST00000508740 FAM159BA6NKW6 160 aa8.11□□□□□ -1.11
NR1I3-226ENST00000508740 ZBBXA8MT70 800 aa8.11□□□□□ -1.11
NR1I3-226ENST00000508740 CXorf49A8MYA2 514 aaPredicted RBP8.11□□□□□ -1.11
NR1I3-226ENST00000508740 PRRG1O14668 218 aa8.11□□□□□ -1.11
NR1I3-226ENST00000508740 TEX28O15482 410 aa8.11□□□□□ -1.11
NR1I3-226ENST00000508740 PRPF4O43172 522 aaKnown RBP eCLIP8.11□□□□□ -1.11
NR1I3-226ENST00000508740 COCHO43405 550 aa8.11□□□□□ -1.11
NR1I3-226ENST00000508740 ACSL4O60488 711 aa8.11□□□□□ -1.11
NR1I3-226ENST00000508740 FGF18O76093 207 aa8.11□□□□□ -1.11
NR1I3-226ENST00000508740 ALDH1A2O94788 518 aa8.11□□□□□ -1.11
NR1I3-226ENST00000508740 INHBAP08476 426 aa8.11□□□□□ -1.11
NR1I3-226ENST00000508740 CTSAP10619 480 aa8.11□□□□□ -1.11
NR1I3-226ENST00000508740 PGAM1P18669 254 aa8.11□□□□□ -1.11
NR1I3-226ENST00000508740 TACR2P21452 398 aa8.11□□□□□ -1.11
NR1I3-226ENST00000508740 NPY2RP49146 381 aa8.11□□□□□ -1.11
NR1I3-226ENST00000508740 HARS2P49590 506 aaKnown RBP8.11□□□□□ -1.11
NR1I3-226ENST00000508740 SEC24CP53992 1094 aa8.11□□□□□ -1.11
NR1I3-226ENST00000508740 EPHB3P54753 998 aa8.11□□□□□ -1.11
NR1I3-226ENST00000508740 CREMQ03060 361 aa8.11□□□□□ -1.11
NR1I3-226ENST00000508740 TWF1Q12792 350 aa8.11□□□□□ -1.11
NR1I3-226ENST00000508740 PLD1Q13393 1074 aa8.11□□□□□ -1.11
NR1I3-226ENST00000508740 GRIN2CQ14957 1233 aa8.11□□□□□ -1.11
NR1I3-226ENST00000508740 VEPH1Q14D04 833 aa8.11□□□□□ -1.11
NR1I3-226ENST00000508740 ANO4Q32M45 955 aa8.11□□□□□ -1.11
NR1I3-226ENST00000508740 CASC4Q6P4E1 433 aa8.11□□□□□ -1.11
NR1I3-226ENST00000508740 PSRC1Q6PGN9 363 aaPredicted RBP8.11□□□□□ -1.11
NR1I3-226ENST00000508740 TFAP2DQ7Z6R9 452 aa8.11□□□□□ -1.11
NR1I3-226ENST00000508740 SLC26A11Q86WA9 606 aa8.11□□□□□ -1.11
NR1I3-226ENST00000508740 LRRC6Q86X45 466 aa8.11□□□□□ -1.11
NR1I3-226ENST00000508740 CHSY1Q86X52 802 aa8.11□□□□□ -1.11
NR1I3-226ENST00000508740 CTAGE3PQ8IX95 158 aa8.11□□□□□ -1.11
NR1I3-226ENST00000508740 PPM1NQ8N819 430 aa8.11□□□□□ -1.11
NR1I3-226ENST00000508740 OR52K1Q8NGK4 314 aa8.11□□□□□ -1.11
NR1I3-226ENST00000508740 ADAMTS19Q8TE59 1207 aa8.11□□□□□ -1.11
NR1I3-226ENST00000508740 MZB1Q8WU39 189 aa8.11□□□□□ -1.11
NR1I3-226ENST00000508740 ARNTL2Q8WYA1 636 aa8.11□□□□□ -1.11
NR1I3-226ENST00000508740 PLD4Q96BZ4 506 aa8.11□□□□□ -1.11
NR1I3-226ENST00000508740 THAP11Q96EK4 314 aa8.11□□□□□ -1.11
NR1I3-226ENST00000508740 MYEOVQ96EZ4 313 aa8.11□□□□□ -1.11
NR1I3-226ENST00000508740 HMCESQ96FZ2 354 aa8.11□□□□□ -1.11
NR1I3-226ENST00000508740 OXNAD1Q96HP4 312 aaPredicted RBP8.11□□□□□ -1.11
NR1I3-226ENST00000508740 RPRD1AQ96P16 312 aaPredicted RBP8.11□□□□□ -1.11
NR1I3-226ENST00000508740 PPP1R2P1Q96PQ5 205 aa8.11□□□□□ -1.11
NR1I3-226ENST00000508740 SMC6Q96SB8 1091 aa8.11□□□□□ -1.11
NR1I3-226ENST00000508740 CCT8L2Q96SF2 557 aa8.11□□□□□ -1.11
NR1I3-226ENST00000508740 UHRF1Q96T88 793 aaPredicted RBP8.11□□□□□ -1.11
NR1I3-226ENST00000508740 NACA2Q9H009 215 aa8.11□□□□□ -1.11
NR1I3-226ENST00000508740 ZBP1Q9H171 429 aa8.11□□□□□ -1.11
NR1I3-226ENST00000508740 RABEP2Q9H5N1 569 aa8.11□□□□□ -1.11
NR1I3-226ENST00000508740 RETREG1Q9H6L5 497 aa8.11□□□□□ -1.11
NR1I3-226ENST00000508740 LRRC40Q9H9A6 602 aa8.11□□□□□ -1.11
NR1I3-226ENST00000508740 GLOD4Q9HC38 313 aa8.11□□□□□ -1.11
NR1I3-226ENST00000508740 SSU72Q9NP77 194 aaKnown RBP8.11□□□□□ -1.11
NR1I3-226ENST00000508740 SMYD2Q9NRG4 433 aa8.11□□□□□ -1.11
NR1I3-226ENST00000508740 RBM22Q9NW64 420 aaKnown RBP eCLIP8.11□□□□□ -1.11
NR1I3-226ENST00000508740 SYBUQ9NX95 663 aa8.11□□□□□ -1.11
NR1I3-226ENST00000508740 NKIRAS1Q9NYS0 192 aa8.11□□□□□ -1.11
NR1I3-226ENST00000508740 MOCS1Q9NZB8 636 aa8.11□□□□□ -1.11
NR1I3-226ENST00000508740 BFARQ9NZS9 450 aa8.11□□□□□ -1.11
NR1I3-226ENST00000508740 ZNF212Q9UDV6 495 aa8.11□□□□□ -1.11
NR1I3-226ENST00000508740 MSRAQ9UJ68 235 aa8.11□□□□□ -1.11
NR1I3-226ENST00000508740 ZNF180Q9UJW8 692 aa8.11□□□□□ -1.11
NR1I3-226ENST00000508740 SMG5Q9UPR3 1016 aaKnown RBP8.11□□□□□ -1.11
NR1I3-226ENST00000508740 AAR2Q9Y312 384 aaKnown RBP8.11□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms