RNA–Protein interactions for RNA: ENST00000508683.5

CCHCR1-226, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 4

Gene CCHCR1, Length 567 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-226ENST00000508683 ZNF354CQ86Y25 554 aa20.42■□□□□ 0.86
CCHCR1-226ENST00000508683 ARHGAP12Q8IWW6 846 aa20.42■□□□□ 0.86
CCHCR1-226ENST00000508683 ZNF366Q8N895 744 aa20.42■□□□□ 0.86
CCHCR1-226ENST00000508683 OR2T3Q8NH03 318 aa20.42■□□□□ 0.86
CCHCR1-226ENST00000508683 PCDH19Q8TAB3 1148 aa20.42■□□□□ 0.86
CCHCR1-226ENST00000508683 RNF157Q96PX1 679 aa20.42■□□□□ 0.86
CCHCR1-226ENST00000508683 ETNK2Q9NVF9 386 aa20.42■□□□□ 0.86
CCHCR1-226ENST00000508683 GUCA1BQ9UMX6 200 aa20.42■□□□□ 0.86
CCHCR1-226ENST00000508683 PPP2R2CQ9Y2T4 447 aa20.42■□□□□ 0.86
CCHCR1-226ENST00000508683 PLXND1Q9Y4D7 1925 aa20.42■□□□□ 0.86
CCHCR1-226ENST00000508683 PALMO75781 387 aa20.41■□□□□ 0.86
CCHCR1-226ENST00000508683 TNNT1P13805 278 aa20.41■□□□□ 0.86
CCHCR1-226ENST00000508683 CTNNA2P26232 953 aa20.41■□□□□ 0.86
CCHCR1-226ENST00000508683 FNTBP49356 437 aa20.41■□□□□ 0.86
CCHCR1-226ENST00000508683 PAPOLAP51003 745 aaKnown RBP20.41■□□□□ 0.86
CCHCR1-226ENST00000508683 COPAP53621 1224 aa20.41■□□□□ 0.86
CCHCR1-226ENST00000508683 DMWDQ09019 674 aa20.41■□□□□ 0.86
CCHCR1-226ENST00000508683 PAFAH1B3Q15102 231 aaKnown RBP20.41■□□□□ 0.86
CCHCR1-226ENST00000508683 TAZQ16635 292 aa20.41■□□□□ 0.86
CCHCR1-226ENST00000508683 ACCSLQ4AC99 568 aa20.41■□□□□ 0.86
CCHCR1-226ENST00000508683 INO80DQ53TQ3 878 aaPredicted RBP20.41■□□□□ 0.86
CCHCR1-226ENST00000508683 C9orf64Q5T6V5 341 aa20.41■□□□□ 0.86
CCHCR1-226ENST00000508683 LINGO4Q6UY18 593 aa20.41■□□□□ 0.86
CCHCR1-226ENST00000508683 NT5DC3Q86UY8 548 aa20.41■□□□□ 0.86
CCHCR1-226ENST00000508683 LRRC49Q8IUZ0 686 aa20.41■□□□□ 0.86
CCHCR1-226ENST00000508683 RCOR2Q8IZ40 523 aa20.41■□□□□ 0.86
CCHCR1-226ENST00000508683 EXD1Q8NHP7 514 aa20.41■□□□□ 0.86
CCHCR1-226ENST00000508683 HMGB4Q8WW32 186 aa20.41■□□□□ 0.86
CCHCR1-226ENST00000508683 PTPRN2Q92932 1015 aa20.41■□□□□ 0.86
CCHCR1-226ENST00000508683 ISG20Q96AZ6 181 aaKnown RBP20.41■□□□□ 0.86
CCHCR1-226ENST00000508683 CELF6Q96J87 481 aaKnown RBP20.41■□□□□ 0.86
CCHCR1-226ENST00000508683 MRGPRX1Q96LB2 322 aa20.41■□□□□ 0.86
CCHCR1-226ENST00000508683 KCNF1Q9H3M0 494 aa20.41■□□□□ 0.86
CCHCR1-226ENST00000508683 BCCIPQ9P287 314 aaKnown RBP eCLIP20.41■□□□□ 0.86
CCHCR1-226ENST00000508683 AMFRQ9UKV5 643 aa20.41■□□□□ 0.86
CCHCR1-226ENST00000508683 PCDHA3Q9Y5H8 950 aa20.41■□□□□ 0.86
CCHCR1-226ENST00000508683 MIF4GDA9UHW6 222 aaKnown RBP20.4■□□□□ 0.86
CCHCR1-226ENST00000508683 LILRB5O75023 590 aa20.4■□□□□ 0.86
CCHCR1-226ENST00000508683 SIN3BO75182 1162 aa20.4■□□□□ 0.86
CCHCR1-226ENST00000508683 ZRANB2O95218 330 aaKnown RBP eCLIP20.4■□□□□ 0.86
CCHCR1-226ENST00000508683 CD160O95971 181 aa20.4■□□□□ 0.86
CCHCR1-226ENST00000508683 NDUFV2P19404 249 aa20.4■□□□□ 0.86
CCHCR1-226ENST00000508683 PXNP49023 591 aaPredicted RBP20.4■□□□□ 0.86
CCHCR1-226ENST00000508683 ZBTB16Q05516 673 aa20.4■□□□□ 0.86
CCHCR1-226ENST00000508683 ELAVL3Q14576 367 aaKnown RBP20.4■□□□□ 0.86
CCHCR1-226ENST00000508683 NCBP2-AS2Q69YL0 99 aa20.4■□□□□ 0.86
CCHCR1-226ENST00000508683 HEATR6Q6AI08 1181 aaKnown RBP20.4■□□□□ 0.86
CCHCR1-226ENST00000508683 PEX26Q7Z412 305 aa20.4■□□□□ 0.86
CCHCR1-226ENST00000508683 TMPRSS6Q8IU80 811 aa20.4■□□□□ 0.86
CCHCR1-226ENST00000508683 PQLC3Q8N755 202 aa20.4■□□□□ 0.86
CCHCR1-226ENST00000508683 RBM41Q96IZ5 413 aaKnown RBP20.4■□□□□ 0.86
CCHCR1-226ENST00000508683 CCDC114Q96M63 670 aa20.4■□□□□ 0.86
CCHCR1-226ENST00000508683 MKRN2Q9H000 416 aaKnown RBP20.4■□□□□ 0.86
CCHCR1-226ENST00000508683 RSPH9Q9H1X1 276 aaPredicted RBP20.4■□□□□ 0.86
CCHCR1-226ENST00000508683 CAPN6Q9Y6Q1 641 aa20.4■□□□□ 0.86
CCHCR1-226ENST00000508683 ALOX15BO15296 676 aa20.39■□□□□ 0.85
CCHCR1-226ENST00000508683 SMAD6O43541 496 aaKnown RBP20.39■□□□□ 0.85
CCHCR1-226ENST00000508683 PRAMEF11O60813 436 aa20.39■□□□□ 0.85
CCHCR1-226ENST00000508683 ZFXP17010 805 aaPredicted RBP20.39■□□□□ 0.85
CCHCR1-226ENST00000508683 CDKN2BP42772 138 aa20.39■□□□□ 0.85
CCHCR1-226ENST00000508683 IL10RBQ08334 325 aa20.39■□□□□ 0.85
CCHCR1-226ENST00000508683 BYSLQ13895 437 aaKnown RBP20.39■□□□□ 0.85
CCHCR1-226ENST00000508683 SLC9A4Q6AI14 798 aa20.39■□□□□ 0.85
CCHCR1-226ENST00000508683 C22orf39Q6P5X5 142 aa20.39■□□□□ 0.85
CCHCR1-226ENST00000508683 PLPP6Q8IY26 295 aa20.39■□□□□ 0.85
CCHCR1-226ENST00000508683 PGBD3Q8N328 593 aa20.39■□□□□ 0.85
CCHCR1-226ENST00000508683 PCDH20Q8N6Y1 951 aaKnown RBP20.39■□□□□ 0.85
CCHCR1-226ENST00000508683 TRAF3IP1Q8TDR0 691 aaPredicted RBP20.39■□□□□ 0.85
CCHCR1-226ENST00000508683 PRCCQ92733 491 aaPredicted RBP20.39■□□□□ 0.85
CCHCR1-226ENST00000508683 KRT35Q92764 455 aa20.39■□□□□ 0.85
CCHCR1-226ENST00000508683 ATOH1Q92858 354 aaPredicted RBP20.39■□□□□ 0.85
CCHCR1-226ENST00000508683 RNF25Q96BH1 459 aaPredicted RBP20.39■□□□□ 0.85
CCHCR1-226ENST00000508683 MAK16Q9BXY0 300 aaKnown RBP20.39■□□□□ 0.85
CCHCR1-226ENST00000508683 MTG2Q9H4K7 406 aa20.39■□□□□ 0.85
CCHCR1-226ENST00000508683 PDFQ9HBH1 243 aa20.39■□□□□ 0.85
CCHCR1-226ENST00000508683 LZTFL1Q9NQ48 299 aa20.39■□□□□ 0.85
CCHCR1-226ENST00000508683 MFHAS1Q9Y4C4 1052 aa20.39■□□□□ 0.85
CCHCR1-226ENST00000508683 K7ERQ8 282 aa20.38■□□□□ 0.85
CCHCR1-226ENST00000508683 DFFAO00273 331 aa20.38■□□□□ 0.85
CCHCR1-226ENST00000508683 MCF2LO15068 1137 aa20.38■□□□□ 0.85
CCHCR1-226ENST00000508683 RNASEH1O60930 286 aaKnown RBP20.38■□□□□ 0.85
CCHCR1-226ENST00000508683 ZNF217O75362 1048 aa20.38■□□□□ 0.85
CCHCR1-226ENST00000508683 MARCKSL1P49006 195 aa20.38■□□□□ 0.85
CCHCR1-226ENST00000508683 PEX5P50542 639 aa20.38■□□□□ 0.85
CCHCR1-226ENST00000508683 RWDD2BP57060 319 aa20.38■□□□□ 0.85
CCHCR1-226ENST00000508683 COPS2P61201 443 aa20.38■□□□□ 0.85
CCHCR1-226ENST00000508683 TFDP2Q14188 446 aa20.38■□□□□ 0.85
CCHCR1-226ENST00000508683 USP39Q53GS9 565 aaKnown RBP20.38■□□□□ 0.85
CCHCR1-226ENST00000508683 TFDP3Q5H9I0 405 aa20.38■□□□□ 0.85
CCHCR1-226ENST00000508683 MFSD7Q6UXD7 560 aa20.38■□□□□ 0.85
CCHCR1-226ENST00000508683 DSG4Q86SJ6 1040 aa20.38■□□□□ 0.85
CCHCR1-226ENST00000508683 SIPA1Q96FS4 1042 aa20.38■□□□□ 0.85
CCHCR1-226ENST00000508683 ZNF599Q96NL3 588 aa20.38■□□□□ 0.85
CCHCR1-226ENST00000508683 IPO11Q9UI26 975 aaKnown RBP20.38■□□□□ 0.85
CCHCR1-226ENST00000508683 SCML1Q9UN30 329 aa20.38■□□□□ 0.85
CCHCR1-226ENST00000508683 FARP1Q9Y4F1 1045 aaPredicted RBP20.38■□□□□ 0.85
CCHCR1-226ENST00000508683 ZSCAN12O43309 604 aa20.37■□□□□ 0.85
CCHCR1-226ENST00000508683 ZNF821O75541 412 aaPredicted RBP20.37■□□□□ 0.85
CCHCR1-226ENST00000508683 RFTN1Q14699 578 aaPredicted RBP20.37■□□□□ 0.85
CCHCR1-226ENST00000508683 PPP2R5EQ16537 467 aa20.37■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms