RNA–Protein interactions for RNA: ENST00000508546.5

NEDD9-211, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 5

Gene NEDD9, Length 581 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-211ENST00000508546 PIP5KL1Q5T9C9 394 aa9.65□□□□□ -0.86
NEDD9-211ENST00000508546 TTC39BQ5VTQ0 682 aaPredicted RBP9.65□□□□□ -0.86
NEDD9-211ENST00000508546 RAP1GAP2Q684P5 730 aa9.65□□□□□ -0.86
NEDD9-211ENST00000508546 CXorf57Q6NSI4 855 aaKnown RBP9.65□□□□□ -0.86
NEDD9-211ENST00000508546 ZCCHC8Q6NZY4 707 aaKnown RBP9.65□□□□□ -0.86
NEDD9-211ENST00000508546 TAC4Q86UU9 113 aa9.65□□□□□ -0.86
NEDD9-211ENST00000508546 HORMAD1Q86X24 394 aa9.65□□□□□ -0.86
NEDD9-211ENST00000508546 CHSY1Q86X52 802 aa9.65□□□□□ -0.86
NEDD9-211ENST00000508546 CCAR2Q8N163 923 aaKnown RBP9.65□□□□□ -0.86
NEDD9-211ENST00000508546 ALG14Q96F25 216 aa9.65□□□□□ -0.86
NEDD9-211ENST00000508546 ATXN7L3BQ96GX2 97 aa9.65□□□□□ -0.86
NEDD9-211ENST00000508546 MYOCQ99972 504 aa9.65□□□□□ -0.86
NEDD9-211ENST00000508546 CALN1Q9BXU9 219 aa9.65□□□□□ -0.86
NEDD9-211ENST00000508546 OSBPL2Q9H1P3 480 aa9.65□□□□□ -0.86
NEDD9-211ENST00000508546 GPR27Q9NS67 375 aa9.65□□□□□ -0.86
NEDD9-211ENST00000508546 MAPK8IP1Q9UQF2 711 aa9.65□□□□□ -0.86
NEDD9-211ENST00000508546 NAALADL1Q9UQQ1 740 aa9.65□□□□□ -0.86
NEDD9-211ENST00000508546 CSNK1G3Q9Y6M4 447 aa9.65□□□□□ -0.86
NEDD9-211ENST00000508546 CACNA1DQ01668 2161 aa9.65□□□□□ -0.86
NEDD9-211ENST00000508546 LRBAP50851 2863 aa9.65□□□□□ -0.87
NEDD9-211ENST00000508546 EME2A4GXA9 379 aaPredicted RBP9.64□□□□□ -0.87
NEDD9-211ENST00000508546 F5H5T6 163 aa9.64□□□□□ -0.87
NEDD9-211ENST00000508546 M0QYV0 167 aa9.64□□□□□ -0.87
NEDD9-211ENST00000508546 IGLV3-25P01717 112 aa9.64□□□□□ -0.87
NEDD9-211ENST00000508546 ZNF18P17022 549 aa9.64□□□□□ -0.87
NEDD9-211ENST00000508546 ITGB6P18564 788 aa9.64□□□□□ -0.87
NEDD9-211ENST00000508546 POU3F2P20265 443 aaPredicted RBP9.64□□□□□ -0.87
NEDD9-211ENST00000508546 CLN3Q13286 438 aa9.64□□□□□ -0.87
NEDD9-211ENST00000508546 EIF4EBP2Q13542 120 aaPredicted RBP9.64□□□□□ -0.87
NEDD9-211ENST00000508546 DLG2Q15700 870 aa9.64□□□□□ -0.87
NEDD9-211ENST00000508546 LINC00303Q3SY05 128 aa9.64□□□□□ -0.87
NEDD9-211ENST00000508546 ACCSLQ4AC99 568 aa9.64□□□□□ -0.87
NEDD9-211ENST00000508546 ZC3H12AQ5D1E8 599 aaKnown RBP9.64□□□□□ -0.87
NEDD9-211ENST00000508546 GCNT7Q6ZNI0 430 aa9.64□□□□□ -0.87
NEDD9-211ENST00000508546 RBM44Q6ZP01 1051 aaKnown RBP9.64□□□□□ -0.87
NEDD9-211ENST00000508546 Q6ZVU0 165 aa9.64□□□□□ -0.87
NEDD9-211ENST00000508546 SLC22A18ASQ8N1D0 253 aa9.64□□□□□ -0.87
NEDD9-211ENST00000508546 ARL14Q8N4G2 192 aa9.64□□□□□ -0.87
NEDD9-211ENST00000508546 SH2D3CQ8N5H7 860 aa9.64□□□□□ -0.87
NEDD9-211ENST00000508546 ATP6V0D2Q8N8Y2 350 aa9.64□□□□□ -0.87
NEDD9-211ENST00000508546 WDR36Q8NI36 951 aaKnown RBP9.64□□□□□ -0.87
NEDD9-211ENST00000508546 KLK6Q92876 244 aa9.64□□□□□ -0.87
NEDD9-211ENST00000508546 FAM149B1Q96BN6 582 aa9.64□□□□□ -0.87
NEDD9-211ENST00000508546 NOX5Q96PH1 765 aa9.64□□□□□ -0.87
NEDD9-211ENST00000508546 CCNL2Q96S94 520 aaPredicted RBP9.64□□□□□ -0.87
NEDD9-211ENST00000508546 PRMT1Q99873 361 aaKnown RBP9.64□□□□□ -0.87
NEDD9-211ENST00000508546 ZSWIM1Q9BR11 485 aa9.64□□□□□ -0.87
NEDD9-211ENST00000508546 TRIM62Q9BVG3 475 aa9.64□□□□□ -0.87
NEDD9-211ENST00000508546 MIS12Q9H081 205 aa9.64□□□□□ -0.87
NEDD9-211ENST00000508546 FOXD4L1Q9NU39 408 aa9.64□□□□□ -0.87
NEDD9-211ENST00000508546 DNAJC28Q9NX36 388 aa9.64□□□□□ -0.87
NEDD9-211ENST00000508546 SALL4Q9UJQ4 1053 aa9.64□□□□□ -0.87
NEDD9-211ENST00000508546 SLC25A13Q9UJS0 675 aa9.64□□□□□ -0.87
NEDD9-211ENST00000508546 RCOR1Q9UKL0 485 aa9.64□□□□□ -0.87
NEDD9-211ENST00000508546 CFAP45Q9UL16 551 aa9.64□□□□□ -0.87
NEDD9-211ENST00000508546 ATXN7L1Q9ULK2 861 aaPredicted RBP9.64□□□□□ -0.87
NEDD9-211ENST00000508546 HS3ST3A1Q9Y663 406 aa9.64□□□□□ -0.87
NEDD9-211ENST00000508546 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP9.63□□□□□ -0.87
NEDD9-211ENST00000508546 A0A1B0GVL5 298 aa9.63□□□□□ -0.87
NEDD9-211ENST00000508546 A6NNZ2 444 aa9.63□□□□□ -0.87
NEDD9-211ENST00000508546 KCNU1A8MYU2 1149 aa9.63□□□□□ -0.87
NEDD9-211ENST00000508546 TPP1O14773 563 aa9.63□□□□□ -0.87
NEDD9-211ENST00000508546 CETN3O15182 167 aa9.63□□□□□ -0.87
NEDD9-211ENST00000508546 NEBLO76041 1014 aa9.63□□□□□ -0.87
NEDD9-211ENST00000508546 CSF2P04141 144 aa9.63□□□□□ -0.87
NEDD9-211ENST00000508546 CTSLP07711 333 aa9.63□□□□□ -0.87
NEDD9-211ENST00000508546 ITGA2BP08514 1039 aa9.63□□□□□ -0.87
NEDD9-211ENST00000508546 NME1P15531 152 aaKnown RBP9.63□□□□□ -0.87
NEDD9-211ENST00000508546 PFKFB1P16118 471 aa9.63□□□□□ -0.87
NEDD9-211ENST00000508546 CMA1P23946 247 aa9.63□□□□□ -0.87
NEDD9-211ENST00000508546 CLDN2P57739 230 aa9.63□□□□□ -0.87
NEDD9-211ENST00000508546 DPYDQ12882 1025 aa9.63□□□□□ -0.87
NEDD9-211ENST00000508546 ZNF177Q13360 481 aaPredicted RBP9.63□□□□□ -0.87
NEDD9-211ENST00000508546 MAPK8IP2Q13387 824 aaPredicted RBP9.63□□□□□ -0.87
NEDD9-211ENST00000508546 BECN1Q14457 450 aa9.63□□□□□ -0.87
NEDD9-211ENST00000508546 CDKN3Q16667 212 aa9.63□□□□□ -0.87
NEDD9-211ENST00000508546 TMEM259Q4ZIN3 620 aa9.63□□□□□ -0.87
NEDD9-211ENST00000508546 RABGAP1LQ5R372 815 aa9.63□□□□□ -0.87
NEDD9-211ENST00000508546 TCERG1LQ5VWI1 586 aa9.63□□□□□ -0.87
NEDD9-211ENST00000508546 SYPL2Q5VXT5 272 aa9.63□□□□□ -0.87
NEDD9-211ENST00000508546 GUSBP11Q6P575 273 aa9.63□□□□□ -0.87
NEDD9-211ENST00000508546 TMEM270Q6UE05 265 aa9.63□□□□□ -0.87
NEDD9-211ENST00000508546 KYAT3Q6YP21 454 aaKnown RBP9.63□□□□□ -0.87
NEDD9-211ENST00000508546 Q6ZSR6 202 aa9.63□□□□□ -0.87
NEDD9-211ENST00000508546 ZNF548Q8NEK5 533 aaPredicted RBP9.63□□□□□ -0.87
NEDD9-211ENST00000508546 TMIEQ8NEW7 156 aa9.63□□□□□ -0.87
NEDD9-211ENST00000508546 WDR48Q8TAF3 677 aa9.63□□□□□ -0.87
NEDD9-211ENST00000508546 BMFQ96LC9 184 aa9.63□□□□□ -0.87
NEDD9-211ENST00000508546 FEM1AQ9BSK4 669 aa9.63□□□□□ -0.87
NEDD9-211ENST00000508546 SRRTQ9BXP5 876 aaKnown RBP9.63□□□□□ -0.87
NEDD9-211ENST00000508546 CAAP1Q9H8G2 361 aa9.63□□□□□ -0.87
NEDD9-211ENST00000508546 FZD3Q9NPG1 666 aa9.63□□□□□ -0.87
NEDD9-211ENST00000508546 SLTMQ9NWH9 1034 aaKnown RBP eCLIP9.63□□□□□ -0.87
NEDD9-211ENST00000508546 SEPT3Q9UH03 358 aa9.63□□□□□ -0.87
NEDD9-211ENST00000508546 SLC12A6Q9UHW9 1150 aa9.63□□□□□ -0.87
NEDD9-211ENST00000508546 ZFR2Q9UPR6 939 aaKnown RBP9.63□□□□□ -0.87
NEDD9-211ENST00000508546 HPSEQ9Y251 543 aa9.63□□□□□ -0.87
NEDD9-211ENST00000508546 HS3ST2Q9Y278 367 aa9.63□□□□□ -0.87
NEDD9-211ENST00000508546 FARP1Q9Y4F1 1045 aaPredicted RBP9.63□□□□□ -0.87
NEDD9-211ENST00000508546 OR51B4Q9Y5P0 310 aa9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms