RNA–Protein interactions for RNA: ENST00000508524.1

TOPBP1-206, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 5

Gene TOPBP1, Length 618 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-206ENST00000508524 CAMK1DQ8IU85 385 aa5.71□□□□□ -1.5
TOPBP1-206ENST00000508524 CADM3Q8N126 398 aa5.71□□□□□ -1.5
TOPBP1-206ENST00000508524 VPS37AQ8NEZ2 397 aa5.71□□□□□ -1.5
TOPBP1-206ENST00000508524 BICD2Q8TD16 824 aa5.71□□□□□ -1.5
TOPBP1-206ENST00000508524 NEUROG1Q92886 237 aa5.71□□□□□ -1.5
TOPBP1-206ENST00000508524 FRG2BQ96QU4 278 aa5.71□□□□□ -1.5
TOPBP1-206ENST00000508524 CTAGE1Q96RT6 745 aa5.71□□□□□ -1.5
TOPBP1-206ENST00000508524 DCLK3Q9C098 648 aa5.71□□□□□ -1.5
TOPBP1-206ENST00000508524 CLPBQ9H078 707 aa5.71□□□□□ -1.5
TOPBP1-206ENST00000508524 KLHL31Q9H511 634 aa5.71□□□□□ -1.5
TOPBP1-206ENST00000508524 TMLHEQ9NVH6 421 aa5.71□□□□□ -1.5
TOPBP1-206ENST00000508524 WWOXQ9NZC7 414 aa5.71□□□□□ -1.5
TOPBP1-206ENST00000508524 KLQ9UEF7 1012 aa5.71□□□□□ -1.5
TOPBP1-206ENST00000508524 PTGDR2Q9Y5Y4 395 aa5.71□□□□□ -1.5
TOPBP1-206ENST00000508524 ACP5P13686 325 aa5.7□□□□□ -1.5
TOPBP1-206ENST00000508524 VEGFAP15692 232 aaPredicted RBP5.7□□□□□ -1.5
TOPBP1-206ENST00000508524 GSTM2P28161 218 aa5.7□□□□□ -1.5
TOPBP1-206ENST00000508524 AVPR2P30518 371 aa5.7□□□□□ -1.5
TOPBP1-206ENST00000508524 TMPRSS3P57727 454 aa5.7□□□□□ -1.5
TOPBP1-206ENST00000508524 LTBQ06643 244 aa5.7□□□□□ -1.5
TOPBP1-206ENST00000508524 Q0VFX4 171 aa5.7□□□□□ -1.5
TOPBP1-206ENST00000508524 CCDC38Q502W7 563 aa5.7□□□□□ -1.5
TOPBP1-206ENST00000508524 PDXDC1Q6P996 788 aa5.7□□□□□ -1.5
TOPBP1-206ENST00000508524 SYNE3Q6ZMZ3 975 aa5.7□□□□□ -1.5
TOPBP1-206ENST00000508524 GALNT7Q86SF2 657 aa5.7□□□□□ -1.5
TOPBP1-206ENST00000508524 SPATA2LQ8IUW3 424 aaPredicted RBP5.7□□□□□ -1.5
TOPBP1-206ENST00000508524 SAMD3Q8N6K7 520 aa5.7□□□□□ -1.5
TOPBP1-206ENST00000508524 RBMXL3Q8N7X1 1067 aaKnown RBP5.7□□□□□ -1.5
TOPBP1-206ENST00000508524 HERC2P3Q9BVR0 1158 aa5.7□□□□□ -1.5
TOPBP1-206ENST00000508524 G6PC2Q9NQR9 355 aa5.7□□□□□ -1.5
TOPBP1-206ENST00000508524 HIF1ANQ9NWT6 349 aa5.7□□□□□ -1.5
TOPBP1-206ENST00000508524 SELENONQ9NZV5 590 aa5.7□□□□□ -1.5
TOPBP1-206ENST00000508524 PLEKHB1Q9UF11 243 aaPredicted RBP5.7□□□□□ -1.5
TOPBP1-206ENST00000508524 ERCC6L2Q5T890 1561 aa5.7□□□□□ -1.5
TOPBP1-206ENST00000508524 GAPVD1Q14C86 1478 aa5.7□□□□□ -1.5
TOPBP1-206ENST00000508524 WIZO95785 1651 aa5.69□□□□□ -1.5
TOPBP1-206ENST00000508524 TOPBP1Q92547 1522 aa5.69□□□□□ -1.5
TOPBP1-206ENST00000508524 HECW2Q9P2P5 1572 aa5.69□□□□□ -1.5
TOPBP1-206ENST00000508524 A0A0A0MQY5 61 aa5.69□□□□□ -1.5
TOPBP1-206ENST00000508524 C11orf97A0A1B0GVM6 126 aaPredicted RBP5.69□□□□□ -1.5
TOPBP1-206ENST00000508524 CLEC18AA5D8T8 446 aa5.69□□□□□ -1.5
TOPBP1-206ENST00000508524 HMX3A6NHT5 357 aa5.69□□□□□ -1.5
TOPBP1-206ENST00000508524 OR6C75A6NL08 312 aa5.69□□□□□ -1.5
TOPBP1-206ENST00000508524 C17orf100A8MU93 164 aa5.69□□□□□ -1.5
TOPBP1-206ENST00000508524 STMND1H3BQB6 276 aa5.69□□□□□ -1.5
TOPBP1-206ENST00000508524 IPO5O00410 1097 aaKnown RBP5.69□□□□□ -1.5
TOPBP1-206ENST00000508524 HOXC6P09630 235 aa5.69□□□□□ -1.5
TOPBP1-206ENST00000508524 FCGR2AP12318 317 aa5.69□□□□□ -1.5
TOPBP1-206ENST00000508524 PRKCHP24723 683 aa5.69□□□□□ -1.5
TOPBP1-206ENST00000508524 ENTPD1P49961 510 aa5.69□□□□□ -1.5
TOPBP1-206ENST00000508524 PRKAA2P54646 552 aa5.69□□□□□ -1.5
TOPBP1-206ENST00000508524 ZP1P60852 638 aa5.69□□□□□ -1.5
TOPBP1-206ENST00000508524 ABATP80404 500 aa5.69□□□□□ -1.5
TOPBP1-206ENST00000508524 MORC3Q14149 939 aa5.69□□□□□ -1.5
TOPBP1-206ENST00000508524 SMAD1Q15797 465 aaKnown RBP5.69□□□□□ -1.5
TOPBP1-206ENST00000508524 TUBB8Q3ZCM7 444 aa5.69□□□□□ -1.5
TOPBP1-206ENST00000508524 INO80DQ53TQ3 878 aaPredicted RBP5.69□□□□□ -1.5
TOPBP1-206ENST00000508524 Q6ZSV7 163 aa5.69□□□□□ -1.5
TOPBP1-206ENST00000508524 SYT13Q7L8C5 426 aa5.69□□□□□ -1.5
TOPBP1-206ENST00000508524 CLEC18CQ8NCF0 446 aa5.69□□□□□ -1.5
TOPBP1-206ENST00000508524 ELP5Q8TE02 316 aa5.69□□□□□ -1.5
TOPBP1-206ENST00000508524 HDAC7Q8WUI4 952 aa5.69□□□□□ -1.5
TOPBP1-206ENST00000508524 CATSPERBQ9H7T0 1116 aa5.69□□□□□ -1.5
TOPBP1-206ENST00000508524 UPB1Q9UBR1 384 aa5.69□□□□□ -1.5
TOPBP1-206ENST00000508524 SRP68Q9UHB9 627 aaKnown RBP5.69□□□□□ -1.5
TOPBP1-206ENST00000508524 OSGIN2Q9Y236 505 aa5.69□□□□□ -1.5
TOPBP1-206ENST00000508524 RAP2CQ9Y3L5 183 aa5.69□□□□□ -1.5
TOPBP1-206ENST00000508524 RAI2Q9Y5P3 530 aa5.69□□□□□ -1.5
TOPBP1-206ENST00000508524 TARBP1Q13395 1621 aaKnown RBP5.69□□□□□ -1.5
TOPBP1-206ENST00000508524 CNTNAP2Q9UHC6 1331 aa5.69□□□□□ -1.5
TOPBP1-206ENST00000508524 MST1RQ04912 1400 aa5.68□□□□□ -1.5
TOPBP1-206ENST00000508524 PRR23D1E9PI22 279 aaPredicted RBP5.68□□□□□ -1.5
TOPBP1-206ENST00000508524 TMCC1O94876 653 aa5.68□□□□□ -1.5
TOPBP1-206ENST00000508524 DDAH2O95865 285 aa5.68□□□□□ -1.5
TOPBP1-206ENST00000508524 ACAA1P09110 424 aaPredicted RBP5.68□□□□□ -1.5
TOPBP1-206ENST00000508524 PRR23D2P0DMB1 279 aaPredicted RBP5.68□□□□□ -1.5
TOPBP1-206ENST00000508524 CST5P28325 142 aaPredicted RBP5.68□□□□□ -1.5
TOPBP1-206ENST00000508524 PPP3CCP48454 512 aa5.68□□□□□ -1.5
TOPBP1-206ENST00000508524 CHAF1AQ13111 956 aaPredicted RBP5.68□□□□□ -1.5
TOPBP1-206ENST00000508524 SYTL3Q4VX76 610 aa5.68□□□□□ -1.5
TOPBP1-206ENST00000508524 OTUD1Q5VV17 481 aaPredicted RBP5.68□□□□□ -1.5
TOPBP1-206ENST00000508524 JMJD6Q6NYC1 403 aaPredicted RBP5.68□□□□□ -1.5
TOPBP1-206ENST00000508524 RASGRP2Q7LDG7 609 aa5.68□□□□□ -1.5
TOPBP1-206ENST00000508524 ARHGAP30Q7Z6I6 1101 aaPredicted RBP5.68□□□□□ -1.5
TOPBP1-206ENST00000508524 HORMAD2Q8N7B1 307 aa5.68□□□□□ -1.5
TOPBP1-206ENST00000508524 FAR1Q8WVX9 515 aa5.68□□□□□ -1.5
TOPBP1-206ENST00000508524 PHF21BQ96EK2 531 aa5.68□□□□□ -1.5
TOPBP1-206ENST00000508524 MPHOSPH6Q99547 160 aaKnown RBP5.68□□□□□ -1.5
TOPBP1-206ENST00000508524 MEIS3Q99687 375 aa5.68□□□□□ -1.5
TOPBP1-206ENST00000508524 CADM1Q9BY67 442 aaKnown RBP5.68□□□□□ -1.5
TOPBP1-206ENST00000508524 SLCO5A1Q9H2Y9 848 aa5.68□□□□□ -1.5
TOPBP1-206ENST00000508524 ACAD9Q9H845 621 aa5.68□□□□□ -1.5
TOPBP1-206ENST00000508524 PLEKHA2Q9HB19 425 aa5.68□□□□□ -1.5
TOPBP1-206ENST00000508524 WNT16Q9UBV4 365 aa5.68□□□□□ -1.5
TOPBP1-206ENST00000508524 FZD10Q9ULW2 581 aa5.68□□□□□ -1.5
TOPBP1-206ENST00000508524 KIF13AQ9H1H9 1805 aa5.68□□□□□ -1.5
TOPBP1-206ENST00000508524 TMEM247A6NEH6 219 aa5.67□□□□□ -1.5
TOPBP1-206ENST00000508524 E7EVH7 732 aa5.67□□□□□ -1.5
TOPBP1-206ENST00000508524 SYN3O14994 580 aa5.67□□□□□ -1.5
TOPBP1-206ENST00000508524 CSF1P09603 554 aa5.67□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms