RNA–Protein interactions for RNA: ENST00000508461.5

SMG7-214, Transcript of SMG7, nonsense mediated mRNA decay factor, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SMG7, Length 3,985 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG7-214ENST00000508461 RCN3Q96D15 328 aa13.1□□□□□ -0.31
SMG7-214ENST00000508461 RPRD1AQ96P16 312 aaPredicted RBP13.1□□□□□ -0.31
SMG7-214ENST00000508461 KLHL5Q96PQ7 755 aa13.1□□□□□ -0.31
SMG7-214ENST00000508461 GATA5Q9BWX5 397 aaPredicted RBP13.1□□□□□ -0.31
SMG7-214ENST00000508461 KLHL4Q9C0H6 718 aa13.1□□□□□ -0.31
SMG7-214ENST00000508461 C20orf27Q9GZN8 174 aa13.1□□□□□ -0.31
SMG7-214ENST00000508461 NCAM2O15394 837 aa13.09□□□□□ -0.31
SMG7-214ENST00000508461 ETS2P15036 469 aa13.09□□□□□ -0.31
SMG7-214ENST00000508461 TEX44Q53QW1 395 aa13.09□□□□□ -0.31
SMG7-214ENST00000508461 TRIML2Q8N7C3 387 aa13.09□□□□□ -0.31
SMG7-214ENST00000508461 PNPLA1Q8N8W4 532 aa13.09□□□□□ -0.31
SMG7-214ENST00000508461 FAM156AQ8NDB6 213 aa13.09□□□□□ -0.31
SMG7-214ENST00000508461 SCAMP5Q8TAC9 235 aa13.09□□□□□ -0.31
SMG7-214ENST00000508461 GTF3C2Q8WUA4 911 aaPredicted RBP13.09□□□□□ -0.31
SMG7-214ENST00000508461 IL22Q9GZX6 179 aa13.09□□□□□ -0.31
SMG7-214ENST00000508461 KCNK13Q9HB14 408 aa13.09□□□□□ -0.31
SMG7-214ENST00000508461 PAPOLBQ9NRJ5 636 aaKnown RBP13.09□□□□□ -0.31
SMG7-214ENST00000508461 ANKRD12Q6UB98 2062 aa13.09□□□□□ -0.31
SMG7-214ENST00000508461 GOLGA4Q13439 2230 aaKnown RBP13.09□□□□□ -0.31
SMG7-214ENST00000508461 hCG_2014768A0A024R1R8 64 aa13.09□□□□□ -0.31
SMG7-214ENST00000508461 FGFR3P22607 806 aa13.09□□□□□ -0.31
SMG7-214ENST00000508461 CHRNA4P43681 627 aa13.09□□□□□ -0.31
SMG7-214ENST00000508461 PLIN5Q00G26 463 aa13.09□□□□□ -0.31
SMG7-214ENST00000508461 MAP7Q14244 749 aa13.09□□□□□ -0.31
SMG7-214ENST00000508461 SLC9B1Q4ZJI4 515 aa13.09□□□□□ -0.31
SMG7-214ENST00000508461 TEDDM1Q5T9Z0 273 aa13.09□□□□□ -0.31
SMG7-214ENST00000508461 NUP93Q8N1F7 819 aa13.09□□□□□ -0.31
SMG7-214ENST00000508461 NPLOC4Q8TAT6 608 aa13.09□□□□□ -0.31
SMG7-214ENST00000508461 PANX3Q96QZ0 392 aa13.09□□□□□ -0.31
SMG7-214ENST00000508461 TBL1YQ9BQ87 522 aa13.09□□□□□ -0.31
SMG7-214ENST00000508461 SEMA6AQ9H2E6 1030 aa13.09□□□□□ -0.31
SMG7-214ENST00000508461 POMKQ9H5K3 350 aa13.09□□□□□ -0.31
SMG7-214ENST00000508461 QSER1Q2KHR3 1735 aa13.09□□□□□ -0.31
SMG7-214ENST00000508461 NEMP2A6NFY4 417 aa13.09□□□□□ -0.31
SMG7-214ENST00000508461 PGM3O95394 542 aa13.09□□□□□ -0.31
SMG7-214ENST00000508461 MPOP05164 745 aa13.09□□□□□ -0.31
SMG7-214ENST00000508461 CD151P48509 253 aa13.09□□□□□ -0.31
SMG7-214ENST00000508461 RPL14P50914 215 aaKnown RBP13.09□□□□□ -0.31
SMG7-214ENST00000508461 PTK2BQ14289 1009 aa13.09□□□□□ -0.31
SMG7-214ENST00000508461 MGAT5BQ3V5L5 792 aa13.09□□□□□ -0.31
SMG7-214ENST00000508461 ARL13AQ5H913 290 aaPredicted RBP13.09□□□□□ -0.31
SMG7-214ENST00000508461 MARK2Q7KZI7 788 aaKnown RBP13.09□□□□□ -0.31
SMG7-214ENST00000508461 EFHBQ8N7U6 833 aa13.09□□□□□ -0.31
SMG7-214ENST00000508461 ZNF333Q96JL9 665 aa13.09□□□□□ -0.31
SMG7-214ENST00000508461 RBBP8Q99708 897 aa13.09□□□□□ -0.31
SMG7-214ENST00000508461 NFKBIZQ9BYH8 718 aa13.09□□□□□ -0.31
SMG7-214ENST00000508461 VRTNQ9H8Y1 702 aa13.09□□□□□ -0.31
SMG7-214ENST00000508461 FAM105AQ9NUU6 356 aa13.09□□□□□ -0.31
SMG7-214ENST00000508461 NCKIPSDQ9NZQ3 722 aa13.09□□□□□ -0.31
SMG7-214ENST00000508461 SIRPGQ9P1W8 387 aa13.09□□□□□ -0.31
SMG7-214ENST00000508461 SCAMP3O14828 347 aaKnown RBP13.08□□□□□ -0.31
SMG7-214ENST00000508461 SORBS2O94875 1100 aaKnown RBP13.08□□□□□ -0.31
SMG7-214ENST00000508461 AP2A1O95782 977 aa13.08□□□□□ -0.31
SMG7-214ENST00000508461 KLF10Q13118 480 aa13.08□□□□□ -0.31
SMG7-214ENST00000508461 ESRP1Q6NXG1 681 aaKnown RBP13.08□□□□□ -0.31
SMG7-214ENST00000508461 SHCBP1Q8NEM2 672 aa13.08□□□□□ -0.31
SMG7-214ENST00000508461 PTCD3Q96EY7 689 aaKnown RBP13.08□□□□□ -0.31
SMG7-214ENST00000508461 ZNF778Q96MU6 729 aa13.08□□□□□ -0.31
SMG7-214ENST00000508461 HNRNPABQ99729 332 aaKnown RBP13.08□□□□□ -0.31
SMG7-214ENST00000508461 ECSITQ9BQ95 431 aa13.08□□□□□ -0.31
SMG7-214ENST00000508461 UPF3AQ9H1J1 476 aaKnown RBP13.08□□□□□ -0.31
SMG7-214ENST00000508461 PFDN4Q9NQP4 134 aa13.08□□□□□ -0.31
SMG7-214ENST00000508461 CORO1CQ9ULV4 474 aaPredicted RBP13.08□□□□□ -0.31
SMG7-214ENST00000508461 BRWD3Q6RI45 1802 aa13.08□□□□□ -0.32
SMG7-214ENST00000508461 TOMM70O94826 608 aa13.08□□□□□ -0.32
SMG7-214ENST00000508461 MLNP12872 115 aa13.08□□□□□ -0.32
SMG7-214ENST00000508461 GEMP55040 296 aa13.08□□□□□ -0.32
SMG7-214ENST00000508461 PPM1LQ5SGD2 360 aa13.08□□□□□ -0.32
SMG7-214ENST00000508461 C10orf120Q5SQS8 335 aa13.08□□□□□ -0.32
SMG7-214ENST00000508461 DHDDSQ86SQ9 333 aa13.08□□□□□ -0.32
SMG7-214ENST00000508461 NXNL1Q96CM4 212 aa13.08□□□□□ -0.32
SMG7-214ENST00000508461 NMD3Q96D46 503 aaKnown RBP13.08□□□□□ -0.32
SMG7-214ENST00000508461 FCRL3Q96P31 734 aaPredicted RBP13.08□□□□□ -0.32
SMG7-214ENST00000508461 OR52B2Q96RD2 323 aa13.08□□□□□ -0.32
SMG7-214ENST00000508461 DHRS4Q9BTZ2 278 aa13.08□□□□□ -0.32
SMG7-214ENST00000508461 FTHL17Q9BXU8 183 aa13.08□□□□□ -0.32
SMG7-214ENST00000508461 CDH19Q9H159 772 aa13.08□□□□□ -0.32
SMG7-214ENST00000508461 EFCAB1Q9HAE3 211 aa13.08□□□□□ -0.32
SMG7-214ENST00000508461 DMAP1Q9NPF5 467 aaPredicted RBP13.08□□□□□ -0.32
SMG7-214ENST00000508461 TRHDEQ9UKU6 1024 aa13.08□□□□□ -0.32
SMG7-214ENST00000508461 LOXHD1Q8IVV2 1947 aa13.08□□□□□ -0.32
SMG7-214ENST00000508461 COL1A2P08123 1366 aa13.08□□□□□ -0.32
SMG7-214ENST00000508461 PEX1O43933 1283 aa13.08□□□□□ -0.32
SMG7-214ENST00000508461 ENDOD1O94919 500 aa13.08□□□□□ -0.32
SMG7-214ENST00000508461 PEX2P28328 305 aa13.08□□□□□ -0.32
SMG7-214ENST00000508461 AXLP30530 894 aa13.08□□□□□ -0.32
SMG7-214ENST00000508461 CD52P31358 61 aa13.08□□□□□ -0.32
SMG7-214ENST00000508461 NPY2RP49146 381 aa13.08□□□□□ -0.32
SMG7-214ENST00000508461 LIMK2P53671 638 aa13.08□□□□□ -0.32
SMG7-214ENST00000508461 DAOAP59103 153 aa13.08□□□□□ -0.32
SMG7-214ENST00000508461 PRKAA1Q13131 559 aa13.08□□□□□ -0.32
SMG7-214ENST00000508461 PCLAFQ15004 111 aa13.08□□□□□ -0.32
SMG7-214ENST00000508461 FBXO48Q5FWF7 155 aa13.08□□□□□ -0.32
SMG7-214ENST00000508461 NOMO2Q5JPE7 1267 aa13.08□□□□□ -0.32
SMG7-214ENST00000508461 TAC4Q86UU9 113 aa13.08□□□□□ -0.32
SMG7-214ENST00000508461 DIS3LQ8TF46 1054 aaKnown RBP13.08□□□□□ -0.32
SMG7-214ENST00000508461 NPAS2Q99743 824 aa13.08□□□□□ -0.32
SMG7-214ENST00000508461 TRPC7Q9HCX4 862 aa13.08□□□□□ -0.32
SMG7-214ENST00000508461 CDH22Q9UJ99 828 aa13.08□□□□□ -0.32
SMG7-214ENST00000508461 DERAQ9Y315 318 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms