RNA–Protein interactions for RNA: ENST00000507401.2

SCN1A-207, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

TSL 3

Gene SCN1A, Length 711 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-207ENST00000507401 SLC2A13Q96QE2 648 aa8.27□□□□□ -1.09
SCN1A-207ENST00000507401 WDR24Q96S15 920 aa8.27□□□□□ -1.09
SCN1A-207ENST00000507401 EDEM2Q9BV94 578 aa8.27□□□□□ -1.09
SCN1A-207ENST00000507401 NUP58Q9BVL2 599 aa8.27□□□□□ -1.09
SCN1A-207ENST00000507401 CAPS2Q9BXY5 557 aa8.27□□□□□ -1.09
SCN1A-207ENST00000507401 STK33Q9BYT3 514 aa8.27□□□□□ -1.09
SCN1A-207ENST00000507401 MKRN2Q9H000 416 aaKnown RBP8.27□□□□□ -1.09
SCN1A-207ENST00000507401 PCED1AQ9H1Q7 454 aa8.27□□□□□ -1.09
SCN1A-207ENST00000507401 SMOC1Q9H4F8 434 aa8.27□□□□□ -1.09
SCN1A-207ENST00000507401 PLCB1Q9NQ66 1216 aa8.27□□□□□ -1.09
SCN1A-207ENST00000507401 ABCB8Q9NUT2 735 aa8.27□□□□□ -1.09
SCN1A-207ENST00000507401 ZNHIT6Q9NWK9 470 aaKnown RBP8.27□□□□□ -1.09
SCN1A-207ENST00000507401 WSB2Q9NYS7 404 aaPredicted RBP8.27□□□□□ -1.09
SCN1A-207ENST00000507401 RRN3Q9NYV6 651 aa8.27□□□□□ -1.09
SCN1A-207ENST00000507401 KIAA1522Q9P206 1035 aaPredicted RBP8.27□□□□□ -1.09
SCN1A-207ENST00000507401 USP36Q9P275 1121 aaKnown RBP8.27□□□□□ -1.09
SCN1A-207ENST00000507401 SUSD2Q9UGT4 822 aa8.27□□□□□ -1.09
SCN1A-207ENST00000507401 MCM8Q9UJA3 840 aa8.27□□□□□ -1.09
SCN1A-207ENST00000507401 MYO6Q9UM54 1294 aa8.27□□□□□ -1.09
SCN1A-207ENST00000507401 CYP8B1Q9UNU6 501 aa8.27□□□□□ -1.09
SCN1A-207ENST00000507401 GON4LQ3T8J9 2241 aa8.27□□□□□ -1.09
SCN1A-207ENST00000507401 PI4KAP42356 2102 aa8.27□□□□□ -1.09
SCN1A-207ENST00000507401 CNOT1A5YKK6 2376 aaKnown RBP8.27□□□□□ -1.09
SCN1A-207ENST00000507401 CKAP5Q14008 2032 aa8.26□□□□□ -1.09
SCN1A-207ENST00000507401 LOC100996750A0A140TA64 210 aa8.26□□□□□ -1.09
SCN1A-207ENST00000507401 CCDC189A1A4V9 331 aa8.26□□□□□ -1.09
SCN1A-207ENST00000507401 KLHL33A6NCF5 533 aa8.26□□□□□ -1.09
SCN1A-207ENST00000507401 METTL12A8MUP2 240 aa8.26□□□□□ -1.09
SCN1A-207ENST00000507401 UPK3BL1B0FP48 263 aa8.26□□□□□ -1.09
SCN1A-207ENST00000507401 PATE3B3GLJ2 98 aa8.26□□□□□ -1.09
SCN1A-207ENST00000507401 UPK3BL2E5RIL1 263 aa8.26□□□□□ -1.09
SCN1A-207ENST00000507401 KCNK5O95279 499 aa8.26□□□□□ -1.09
SCN1A-207ENST00000507401 SRPRAP08240 638 aaKnown RBP8.26□□□□□ -1.09
SCN1A-207ENST00000507401 ACADMP11310 421 aa8.26□□□□□ -1.09
SCN1A-207ENST00000507401 CEACAM1P13688 526 aa8.26□□□□□ -1.09
SCN1A-207ENST00000507401 CYP11B1P15538 503 aa8.26□□□□□ -1.09
SCN1A-207ENST00000507401 GNSP15586 552 aa8.26□□□□□ -1.09
SCN1A-207ENST00000507401 ABCB4P21439 1286 aa8.26□□□□□ -1.09
SCN1A-207ENST00000507401 PRKCHP24723 683 aa8.26□□□□□ -1.09
SCN1A-207ENST00000507401 TNFRSF8P28908 595 aa8.26□□□□□ -1.09
SCN1A-207ENST00000507401 CCR1P32246 355 aa8.26□□□□□ -1.09
SCN1A-207ENST00000507401 CD70P32970 193 aa8.26□□□□□ -1.09
SCN1A-207ENST00000507401 CDH5P33151 784 aaPredicted RBP8.26□□□□□ -1.09
SCN1A-207ENST00000507401 NOS2P35228 1153 aa8.26□□□□□ -1.09
SCN1A-207ENST00000507401 IRAK1P51617 712 aa8.26□□□□□ -1.09
SCN1A-207ENST00000507401 PLK1P53350 603 aa8.26□□□□□ -1.09
SCN1A-207ENST00000507401 COPAP53621 1224 aa8.26□□□□□ -1.09
SCN1A-207ENST00000507401 OXCT1P55809 520 aa8.26□□□□□ -1.09
SCN1A-207ENST00000507401 RELBQ01201 579 aa8.26□□□□□ -1.09
SCN1A-207ENST00000507401 GFPT1Q06210 699 aaPredicted RBP8.26□□□□□ -1.09
SCN1A-207ENST00000507401 SFSWAPQ12872 951 aaKnown RBP8.26□□□□□ -1.09
SCN1A-207ENST00000507401 TAF5Q15542 800 aa8.26□□□□□ -1.09
SCN1A-207ENST00000507401 ZNF800Q2TB10 664 aaPredicted RBP eCLIP8.26□□□□□ -1.09
SCN1A-207ENST00000507401 CCDC38Q502W7 563 aa8.26□□□□□ -1.09
SCN1A-207ENST00000507401 DCAF6Q58WW2 860 aa8.26□□□□□ -1.09
SCN1A-207ENST00000507401 ZC3H12AQ5D1E8 599 aaKnown RBP8.26□□□□□ -1.09
SCN1A-207ENST00000507401 ACBD5Q5T8D3 534 aaPredicted RBP8.26□□□□□ -1.09
SCN1A-207ENST00000507401 TTC39BQ5VTQ0 682 aaPredicted RBP8.26□□□□□ -1.09
SCN1A-207ENST00000507401 KIAA1324Q6UXG2 1013 aaKnown RBP8.26□□□□□ -1.09
SCN1A-207ENST00000507401 ARMCX6Q7L4S7 300 aa8.26□□□□□ -1.09
SCN1A-207ENST00000507401 SLC26A9Q7LBE3 791 aa8.26□□□□□ -1.09
SCN1A-207ENST00000507401 TAC4Q86UU9 113 aa8.26□□□□□ -1.09
SCN1A-207ENST00000507401 SLC47A2Q86VL8 602 aa8.26□□□□□ -1.09
SCN1A-207ENST00000507401 SLC41A1Q8IVJ1 513 aa8.26□□□□□ -1.09
SCN1A-207ENST00000507401 MFN1Q8IWA4 741 aa8.26□□□□□ -1.09
SCN1A-207ENST00000507401 DEFB106AQ8N104 65 aa8.26□□□□□ -1.09
SCN1A-207ENST00000507401 ATP6V0D2Q8N8Y2 350 aa8.26□□□□□ -1.09
SCN1A-207ENST00000507401 TC2NQ8N9U0 490 aa8.26□□□□□ -1.09
SCN1A-207ENST00000507401 TMEM35BQ8NCS4 154 aa8.26□□□□□ -1.09
SCN1A-207ENST00000507401 SORCS1Q8WY21 1168 aa8.26□□□□□ -1.09
SCN1A-207ENST00000507401 TOE1Q96GM8 510 aaKnown RBP8.26□□□□□ -1.09
SCN1A-207ENST00000507401 CPXM1Q96SM3 734 aa8.26□□□□□ -1.09
SCN1A-207ENST00000507401 INSM2Q96T92 566 aaPredicted RBP8.26□□□□□ -1.09
SCN1A-207ENST00000507401 SH3GL2Q99962 352 aa8.26□□□□□ -1.09
SCN1A-207ENST00000507401 KRTAP4-6Q9BYQ5 205 aa8.26□□□□□ -1.09
SCN1A-207ENST00000507401 CAPN10Q9HC96 672 aa8.26□□□□□ -1.09
SCN1A-207ENST00000507401 SAMSN1Q9NSI8 373 aaKnown RBP8.26□□□□□ -1.09
SCN1A-207ENST00000507401 TJP2Q9UDY2 1190 aa8.26□□□□□ -1.09
SCN1A-207ENST00000507401 HPCAL4Q9UM19 191 aa8.26□□□□□ -1.09
SCN1A-207ENST00000507401 SCML1Q9UN30 329 aa8.26□□□□□ -1.09
SCN1A-207ENST00000507401 DAAM1Q9Y4D1 1078 aa8.26□□□□□ -1.09
SCN1A-207ENST00000507401 SPTBN2O15020 2390 aa8.26□□□□□ -1.09
SCN1A-207ENST00000507401 A0A1B0GTH6 734 aa8.25□□□□□ -1.09
SCN1A-207ENST00000507401 GOLGA6BA6NDN3 693 aa8.25□□□□□ -1.09
SCN1A-207ENST00000507401 LRRC10BA6NIK2 292 aa8.25□□□□□ -1.09
SCN1A-207ENST00000507401 FIGNL2A6NMB9 653 aa8.25□□□□□ -1.09
SCN1A-207ENST00000507401 H0Y626 953 aa8.25□□□□□ -1.09
SCN1A-207ENST00000507401 LIN7AO14910 233 aaPredicted RBP8.25□□□□□ -1.09
SCN1A-207ENST00000507401 LUC7L3O95232 432 aaKnown RBP8.25□□□□□ -1.09
SCN1A-207ENST00000507401 MOCS3O95396 460 aa8.25□□□□□ -1.09
SCN1A-207ENST00000507401 LSM8O95777 96 aaKnown RBP8.25□□□□□ -1.09
SCN1A-207ENST00000507401 F9P00740 461 aa8.25□□□□□ -1.09
SCN1A-207ENST00000507401 SYPP08247 313 aa8.25□□□□□ -1.09
SCN1A-207ENST00000507401 UCHL3P15374 230 aa8.25□□□□□ -1.09
SCN1A-207ENST00000507401 ZNF18P17022 549 aa8.25□□□□□ -1.09
SCN1A-207ENST00000507401 ENGP17813 658 aa8.25□□□□□ -1.09
SCN1A-207ENST00000507401 TACR2P21452 398 aa8.25□□□□□ -1.09
SCN1A-207ENST00000507401 SCNN1AP37088 669 aa8.25□□□□□ -1.09
SCN1A-207ENST00000507401 MATKP42679 507 aa8.25□□□□□ -1.09
SCN1A-207ENST00000507401 GABRB2P47870 512 aa8.25□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms