RNA–Protein interactions for RNA: ENST00000507326.2

HMGB3P15-201, Transcript of high mobility group box 3 pseudogene 15, humanhuman

BASIC

Gene HMGB3P15, Length 574 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P15-201ENST00000507326 HOXB13Q92826 284 aaPredicted RBP3.77□□□□□ -1.81
HMGB3P15-201ENST00000507326 VPS33AQ96AX1 596 aa3.77□□□□□ -1.81
HMGB3P15-201ENST00000507326 VPS50Q96JG6 964 aa3.77□□□□□ -1.81
HMGB3P15-201ENST00000507326 TUBA1CQ9BQE3 449 aa3.77□□□□□ -1.81
HMGB3P15-201ENST00000507326 SLC39A3Q9BRY0 314 aa3.77□□□□□ -1.81
HMGB3P15-201ENST00000507326 AGXT2Q9BYV1 514 aa3.77□□□□□ -1.81
HMGB3P15-201ENST00000507326 FTOQ9C0B1 505 aaKnown RBP eCLIP3.77□□□□□ -1.81
HMGB3P15-201ENST00000507326 TAOK3Q9H2K8 898 aa3.77□□□□□ -1.81
HMGB3P15-201ENST00000507326 GSTO2Q9H4Y5 243 aa3.77□□□□□ -1.81
HMGB3P15-201ENST00000507326 LIN28AQ9H9Z2 209 aaKnown RBP3.77□□□□□ -1.81
HMGB3P15-201ENST00000507326 CPNE5Q9HCH3 593 aa3.77□□□□□ -1.81
HMGB3P15-201ENST00000507326 SIRT3Q9NTG7 399 aaPredicted RBP3.77□□□□□ -1.81
HMGB3P15-201ENST00000507326 TMEM140Q9NV12 185 aa3.77□□□□□ -1.81
HMGB3P15-201ENST00000507326 TMEM160Q9NX00 188 aa3.77□□□□□ -1.81
HMGB3P15-201ENST00000507326 DDX43Q9NXZ2 648 aaKnown RBP3.77□□□□□ -1.81
HMGB3P15-201ENST00000507326 COQ3Q9NZJ6 369 aa3.77□□□□□ -1.81
HMGB3P15-201ENST00000507326 FAM30AQ9NZY2 134 aa3.77□□□□□ -1.81
HMGB3P15-201ENST00000507326 MARCH4Q9P2E8 410 aaPredicted RBP3.77□□□□□ -1.81
HMGB3P15-201ENST00000507326 SEC63Q9UGP8 760 aaKnown RBP3.77□□□□□ -1.81
HMGB3P15-201ENST00000507326 CNPY2Q9Y2B0 182 aa3.77□□□□□ -1.81
HMGB3P15-201ENST00000507326 BTBD3Q9Y2F9 522 aa3.77□□□□□ -1.81
HMGB3P15-201ENST00000507326 NOSIPQ9Y314 301 aaKnown RBP3.77□□□□□ -1.81
HMGB3P15-201ENST00000507326 FAM169AQ9Y6X4 670 aa3.77□□□□□ -1.81
HMGB3P15-201ENST00000507326 ARHGAP10A1A4S6 786 aa3.76□□□□□ -1.81
HMGB3P15-201ENST00000507326 A8MXE2 369 aa3.76□□□□□ -1.81
HMGB3P15-201ENST00000507326 FAM86B1E9PN63 330 aa3.76□□□□□ -1.81
HMGB3P15-201ENST00000507326 H0YCG3 227 aa3.76□□□□□ -1.81
HMGB3P15-201ENST00000507326 SH2B2O14492 632 aaPredicted RBP3.76□□□□□ -1.81
HMGB3P15-201ENST00000507326 SCAMP1O15126 338 aa3.76□□□□□ -1.81
HMGB3P15-201ENST00000507326 PRPF4O43172 522 aaKnown RBP eCLIP3.76□□□□□ -1.81
HMGB3P15-201ENST00000507326 GMFGO60234 142 aa3.76□□□□□ -1.81
HMGB3P15-201ENST00000507326 SLITRK3O94933 977 aa3.76□□□□□ -1.81
HMGB3P15-201ENST00000507326 CLEC3BP05452 202 aa3.76□□□□□ -1.81
HMGB3P15-201ENST00000507326 DLDP09622 509 aaKnown RBP3.76□□□□□ -1.81
HMGB3P15-201ENST00000507326 ALAS1P13196 640 aa3.76□□□□□ -1.81
HMGB3P15-201ENST00000507326 PRG2P13727 222 aa3.76□□□□□ -1.81
HMGB3P15-201ENST00000507326 CSF2RAP15509 400 aa3.76□□□□□ -1.81
HMGB3P15-201ENST00000507326 PDGFRAP16234 1089 aa3.76□□□□□ -1.81
HMGB3P15-201ENST00000507326 TMEM11P17152 192 aa3.76□□□□□ -1.81
HMGB3P15-201ENST00000507326 TYMPP19971 482 aa3.76□□□□□ -1.81
HMGB3P15-201ENST00000507326 GCH1P30793 250 aa3.76□□□□□ -1.81
HMGB3P15-201ENST00000507326 NF2P35240 595 aa3.76□□□□□ -1.81
HMGB3P15-201ENST00000507326 PPARGP37231 505 aaPredicted RBP3.76□□□□□ -1.81
HMGB3P15-201ENST00000507326 FOLR3P41439 243 aa3.76□□□□□ -1.81
HMGB3P15-201ENST00000507326 DPP6P42658 865 aa3.76□□□□□ -1.81
HMGB3P15-201ENST00000507326 HNMTP50135 292 aa3.76□□□□□ -1.81
HMGB3P15-201ENST00000507326 VCPP55072 806 aaKnown RBP3.76□□□□□ -1.81
HMGB3P15-201ENST00000507326 PRAMEP78395 509 aa3.76□□□□□ -1.81
HMGB3P15-201ENST00000507326 FMO1Q01740 532 aa3.76□□□□□ -1.81
HMGB3P15-201ENST00000507326 CCDC15Q0P6D6 951 aa3.76□□□□□ -1.81
HMGB3P15-201ENST00000507326 AIMP2Q13155 320 aaKnown RBP3.76□□□□□ -1.81
HMGB3P15-201ENST00000507326 NTRK2Q16620 822 aa3.76□□□□□ -1.81
HMGB3P15-201ENST00000507326 RABL6Q3YEC7 729 aaPredicted RBP3.76□□□□□ -1.81
HMGB3P15-201ENST00000507326 SUPT20HL1Q3ZLR7 823 aa3.76□□□□□ -1.81
HMGB3P15-201ENST00000507326 AMOTQ4VCS5 1084 aa3.76□□□□□ -1.81
HMGB3P15-201ENST00000507326 C9orf152Q5JTZ5 239 aa3.76□□□□□ -1.81
HMGB3P15-201ENST00000507326 GLRA4Q5JXX5 417 aa3.76□□□□□ -1.81
HMGB3P15-201ENST00000507326 DCLRE1AQ6PJP8 1040 aa3.76□□□□□ -1.81
HMGB3P15-201ENST00000507326 USP17L6PQ6QN14 398 aa3.76□□□□□ -1.81
HMGB3P15-201ENST00000507326 PTCHD4Q6ZW05 846 aa3.76□□□□□ -1.81
HMGB3P15-201ENST00000507326 BBS12Q6ZW61 710 aa3.76□□□□□ -1.81
HMGB3P15-201ENST00000507326 IKBIPQ70UQ0 350 aa3.76□□□□□ -1.81
HMGB3P15-201ENST00000507326 PIWIL3Q7Z3Z3 882 aaKnown RBP3.76□□□□□ -1.81
HMGB3P15-201ENST00000507326 GRASPQ7Z6J2 395 aaPredicted RBP3.76□□□□□ -1.81
HMGB3P15-201ENST00000507326 MICU3Q86XE3 530 aa3.76□□□□□ -1.81
HMGB3P15-201ENST00000507326 FITM2Q8N6M3 262 aa3.76□□□□□ -1.81
HMGB3P15-201ENST00000507326 BBOF1Q8ND07 529 aa3.76□□□□□ -1.81
HMGB3P15-201ENST00000507326 C3orf20Q8ND61 904 aa3.76□□□□□ -1.81
HMGB3P15-201ENST00000507326 TNIP2Q8NFZ5 429 aa3.76□□□□□ -1.81
HMGB3P15-201ENST00000507326 OR56B2PQ8NGI1 322 aa3.76□□□□□ -1.81
HMGB3P15-201ENST00000507326 TBC1D15Q8TC07 691 aa3.76□□□□□ -1.81
HMGB3P15-201ENST00000507326 BRIX1Q8TDN6 353 aaKnown RBP3.76□□□□□ -1.81
HMGB3P15-201ENST00000507326 CREB3L4Q8TEY5 395 aa3.76□□□□□ -1.81
HMGB3P15-201ENST00000507326 CASKIN2Q8WXE0 1202 aa3.76□□□□□ -1.81
HMGB3P15-201ENST00000507326 DDB2Q92466 427 aa3.76□□□□□ -1.81
HMGB3P15-201ENST00000507326 PTP4A1Q93096 173 aa3.76□□□□□ -1.81
HMGB3P15-201ENST00000507326 CYFIP2Q96F07 1278 aa3.76□□□□□ -1.81
HMGB3P15-201ENST00000507326 PNKPQ96T60 521 aa3.76□□□□□ -1.81
HMGB3P15-201ENST00000507326 NAP1L3Q99457 506 aaPredicted RBP3.76□□□□□ -1.81
HMGB3P15-201ENST00000507326 GAL3ST1Q99999 423 aa3.76□□□□□ -1.81
HMGB3P15-201ENST00000507326 FERMT1Q9BQL6 677 aa3.76□□□□□ -1.81
HMGB3P15-201ENST00000507326 ADI1Q9BV57 179 aa3.76□□□□□ -1.81
HMGB3P15-201ENST00000507326 C1QTNF7Q9BXJ2 289 aa3.76□□□□□ -1.81
HMGB3P15-201ENST00000507326 RIBC2Q9H4K1 309 aa3.76□□□□□ -1.81
HMGB3P15-201ENST00000507326 ARMT1Q9H993 441 aa3.76□□□□□ -1.81
HMGB3P15-201ENST00000507326 PDE11AQ9HCR9 933 aa3.76□□□□□ -1.81
HMGB3P15-201ENST00000507326 TRPV5Q9NQA5 729 aa3.76□□□□□ -1.81
HMGB3P15-201ENST00000507326 ABCB8Q9NUT2 735 aa3.76□□□□□ -1.81
HMGB3P15-201ENST00000507326 ATAD3AQ9NVI7 634 aa3.76□□□□□ -1.81
HMGB3P15-201ENST00000507326 INTS13Q9NVM9 706 aa3.76□□□□□ -1.81
HMGB3P15-201ENST00000507326 PPP1R14DQ9NXH3 145 aa3.76□□□□□ -1.81
HMGB3P15-201ENST00000507326 IL20Q9NYY1 176 aa3.76□□□□□ -1.81
HMGB3P15-201ENST00000507326 FBXO40Q9UH90 709 aa3.76□□□□□ -1.81
HMGB3P15-201ENST00000507326 CNOT7Q9UIV1 285 aaKnown RBP3.76□□□□□ -1.81
HMGB3P15-201ENST00000507326 LEF1Q9UJU2 399 aaPredicted RBP3.76□□□□□ -1.81
HMGB3P15-201ENST00000507326 PPIEQ9UNP9 301 aaKnown RBP3.76□□□□□ -1.81
HMGB3P15-201ENST00000507326 EXOC7Q9UPT5 735 aa3.76□□□□□ -1.81
HMGB3P15-201ENST00000507326 MAN2B2Q9Y2E5 1009 aa3.76□□□□□ -1.81
HMGB3P15-201ENST00000507326 TBC1D30Q9Y2I9 924 aa3.76□□□□□ -1.81
HMGB3P15-201ENST00000507326 KIF7Q2M1P5 1343 aa3.75□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms