RNA–Protein interactions for RNA: ENST00000507247.5

RNF4-208, Transcript of ring finger protein 4, humanhuman

TSL 1 (best)

Gene RNF4, Length 616 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-208ENST00000507247 CTAGE6Q86UF2 777 aa14.47□□□□□ -0.09
RNF4-208ENST00000507247 CTAGE4Q8IX94 777 aa14.47□□□□□ -0.09
RNF4-208ENST00000507247 ALLCQ8N6M5 410 aa14.47□□□□□ -0.09
RNF4-208ENST00000507247 FAM71DQ8N9W8 422 aa14.47□□□□□ -0.09
RNF4-208ENST00000507247 GLIS1Q8NBF1 620 aa14.47□□□□□ -0.09
RNF4-208ENST00000507247 MNS1Q8NEH6 495 aa14.47□□□□□ -0.09
RNF4-208ENST00000507247 USP33Q8TEY7 942 aa14.47□□□□□ -0.09
RNF4-208ENST00000507247 CYB5D2Q8WUJ1 264 aa14.47□□□□□ -0.09
RNF4-208ENST00000507247 HTR3CQ8WXA8 447 aa14.47□□□□□ -0.09
RNF4-208ENST00000507247 SORCS1Q8WY21 1168 aa14.47□□□□□ -0.09
RNF4-208ENST00000507247 MAML1Q92585 1016 aa14.47□□□□□ -0.09
RNF4-208ENST00000507247 TTC17Q96AE7 1141 aa14.47□□□□□ -0.09
RNF4-208ENST00000507247 ACDQ96AP0 544 aa14.47□□□□□ -0.09
RNF4-208ENST00000507247 CCDC114Q96M63 670 aa14.47□□□□□ -0.09
RNF4-208ENST00000507247 KRT12Q99456 494 aa14.47□□□□□ -0.09
RNF4-208ENST00000507247 C2orf49Q9BVC5 232 aaPredicted RBP14.47□□□□□ -0.09
RNF4-208ENST00000507247 CEP41Q9BYV8 373 aa14.47□□□□□ -0.09
RNF4-208ENST00000507247 SEPT10Q9P0V9 454 aa14.47□□□□□ -0.09
RNF4-208ENST00000507247 RAPGEFL1Q9UHV5 662 aa14.47□□□□□ -0.09
RNF4-208ENST00000507247 HPCAL4Q9UM19 191 aa14.47□□□□□ -0.09
RNF4-208ENST00000507247 ZNF148Q9UQR1 794 aa14.47□□□□□ -0.09
RNF4-208ENST00000507247 MYO18AQ92614 2054 aaKnown RBP14.46□□□□□ -0.09
RNF4-208ENST00000507247 MATN3O15232 486 aa14.46□□□□□ -0.09
RNF4-208ENST00000507247 MT-CO1P00395 513 aa14.46□□□□□ -0.09
RNF4-208ENST00000507247 APODP05090 189 aa14.46□□□□□ -0.09
RNF4-208ENST00000507247 ETS1P14921 441 aa14.46□□□□□ -0.09
RNF4-208ENST00000507247 POLR2EP19388 210 aaKnown RBP14.46□□□□□ -0.09
RNF4-208ENST00000507247 PTPN3P26045 913 aa14.46□□□□□ -0.09
RNF4-208ENST00000507247 GRIA2P42262 883 aa14.46□□□□□ -0.09
RNF4-208ENST00000507247 PTGIRP43119 386 aa14.46□□□□□ -0.09
RNF4-208ENST00000507247 IFI35P80217 286 aaPredicted RBP14.46□□□□□ -0.09
RNF4-208ENST00000507247 SLC10A7Q0GE19 358 aa14.46□□□□□ -0.09
RNF4-208ENST00000507247 WASHC5Q12768 1159 aa14.46□□□□□ -0.09
RNF4-208ENST00000507247 MLF2Q15773 248 aaPredicted RBP14.46□□□□□ -0.09
RNF4-208ENST00000507247 TMEM196Q5HYL7 178 aa14.46□□□□□ -0.09
RNF4-208ENST00000507247 HEATR6Q6AI08 1181 aaKnown RBP14.46□□□□□ -0.09
RNF4-208ENST00000507247 FSTL4Q6MZW2 842 aa14.46□□□□□ -0.09
RNF4-208ENST00000507247 TPRG1Q6ZUI0 275 aa14.46□□□□□ -0.09
RNF4-208ENST00000507247 CCDC105Q8IYK2 499 aa14.46□□□□□ -0.09
RNF4-208ENST00000507247 GJD3Q8N144 294 aa14.46□□□□□ -0.09
RNF4-208ENST00000507247 NOA1Q8NC60 698 aaKnown RBP14.46□□□□□ -0.09
RNF4-208ENST00000507247 ATL2Q8NHH9 583 aa14.46□□□□□ -0.09
RNF4-208ENST00000507247 FATE1Q969F0 183 aa14.46□□□□□ -0.09
RNF4-208ENST00000507247 RPL10LQ96L21 214 aaKnown RBP14.46□□□□□ -0.09
RNF4-208ENST00000507247 MRGPRX3Q96LB0 322 aa14.46□□□□□ -0.09
RNF4-208ENST00000507247 IL12RB2Q99665 862 aa14.46□□□□□ -0.09
RNF4-208ENST00000507247 CIPCQ9C0C6 399 aa14.46□□□□□ -0.09
RNF4-208ENST00000507247 ELOVL2Q9NXB9 296 aa14.46□□□□□ -0.09
RNF4-208ENST00000507247 UBA2Q9UBT2 640 aaPredicted RBP14.46□□□□□ -0.09
RNF4-208ENST00000507247 PCYOX1Q9UHG3 505 aa14.46□□□□□ -0.09
RNF4-208ENST00000507247 AMACRQ9UHK6 382 aa14.46□□□□□ -0.09
RNF4-208ENST00000507247 HCN2Q9UL51 889 aa14.46□□□□□ -0.09
RNF4-208ENST00000507247 CA14Q9ULX7 337 aa14.46□□□□□ -0.09
RNF4-208ENST00000507247 ATG2BQ96BY7 2078 aa14.46□□□□□ -0.09
RNF4-208ENST00000507247 A0A0A0MRY4 1105 aa14.45□□□□□ -0.1
RNF4-208ENST00000507247 CFAP69A5D8W1 941 aa14.45□□□□□ -0.1
RNF4-208ENST00000507247 TBC1D3BA6NDS4 549 aa14.45□□□□□ -0.1
RNF4-208ENST00000507247 ZSCAN5CA6NGD5 496 aaPredicted RBP14.45□□□□□ -0.1
RNF4-208ENST00000507247 K7ERQ8 282 aa14.45□□□□□ -0.1
RNF4-208ENST00000507247 SGK1O00141 431 aa14.45□□□□□ -0.1
RNF4-208ENST00000507247 RNF103O00237 685 aa14.45□□□□□ -0.1
RNF4-208ENST00000507247 EGFP01133 1207 aa14.45□□□□□ -0.1
RNF4-208ENST00000507247 JCHAINP01591 159 aa14.45□□□□□ -0.1
RNF4-208ENST00000507247 CCNB1P14635 433 aa14.45□□□□□ -0.1
RNF4-208ENST00000507247 GLULP15104 373 aa14.45□□□□□ -0.1
RNF4-208ENST00000507247 SERPINH1P50454 418 aaKnown RBP14.45□□□□□ -0.1
RNF4-208ENST00000507247 MRPS25P82663 173 aaKnown RBP14.45□□□□□ -0.1
RNF4-208ENST00000507247 ECT2LQ008S8 904 aa14.45□□□□□ -0.1
RNF4-208ENST00000507247 SULT2A1Q06520 285 aa14.45□□□□□ -0.1
RNF4-208ENST00000507247 LBRQ14739 615 aaKnown RBP14.45□□□□□ -0.1
RNF4-208ENST00000507247 CYTH1Q15438 398 aa14.45□□□□□ -0.1
RNF4-208ENST00000507247 PTPRNQ16849 979 aa14.45□□□□□ -0.1
RNF4-208ENST00000507247 TMCO4Q5TGY1 634 aa14.45□□□□□ -0.1
RNF4-208ENST00000507247 SUGP1Q8IWZ8 645 aaKnown RBP14.45□□□□□ -0.1
RNF4-208ENST00000507247 ZNF567Q8N184 647 aa14.45□□□□□ -0.1
RNF4-208ENST00000507247 MMGT1Q8N4V1 131 aa14.45□□□□□ -0.1
RNF4-208ENST00000507247 TEX26Q8N6G2 289 aa14.45□□□□□ -0.1
RNF4-208ENST00000507247 CNTD1Q8N815 330 aa14.45□□□□□ -0.1
RNF4-208ENST00000507247 SLCO2A1Q92959 643 aa14.45□□□□□ -0.1
RNF4-208ENST00000507247 RTP4Q96DX8 246 aa14.45□□□□□ -0.1
RNF4-208ENST00000507247 MYO19Q96H55 970 aa14.45□□□□□ -0.1
RNF4-208ENST00000507247 ZNF599Q96NL3 588 aa14.45□□□□□ -0.1
RNF4-208ENST00000507247 EPHX3Q9H6B9 360 aa14.45□□□□□ -0.1
RNF4-208ENST00000507247 MUTYHQ9UIF7 546 aa14.45□□□□□ -0.1
RNF4-208ENST00000507247 ERVW-1Q9UQF0 538 aa14.45□□□□□ -0.1
RNF4-208ENST00000507247 NEU2Q9Y3R4 380 aa14.45□□□□□ -0.1
RNF4-208ENST00000507247 ANKRD36A6QL64 1941 aa14.45□□□□□ -0.1
RNF4-208ENST00000507247 CXorf51AA0A1B0GTR3 108 aa14.44□□□□□ -0.1
RNF4-208ENST00000507247 KRBA1A5PL33 1030 aa14.44□□□□□ -0.1
RNF4-208ENST00000507247 K7EQS6 105 aa14.44□□□□□ -0.1
RNF4-208ENST00000507247 MUSKO15146 869 aa14.44□□□□□ -0.1
RNF4-208ENST00000507247 TTI1O43156 1089 aa14.44□□□□□ -0.1
RNF4-208ENST00000507247 MTSS1O43312 755 aa14.44□□□□□ -0.1
RNF4-208ENST00000507247 RAD51CO43502 376 aa14.44□□□□□ -0.1
RNF4-208ENST00000507247 SMAD6O43541 496 aaKnown RBP14.44□□□□□ -0.1
RNF4-208ENST00000507247 TMCC1O94876 653 aa14.44□□□□□ -0.1
RNF4-208ENST00000507247 IFNB1P01574 187 aa14.44□□□□□ -0.1
RNF4-208ENST00000507247 ASLP04424 464 aa14.44□□□□□ -0.1
RNF4-208ENST00000507247 HLA-DQB2P05538 268 aa14.44□□□□□ -0.1
RNF4-208ENST00000507247 DLDP09622 509 aaKnown RBP14.44□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms