RNA–Protein interactions for RNA: ENST00000506783.5

PHF3-208, Transcript of PHD finger protein 3, humanhuman

TSL 1 (best)

Gene PHF3, Length 3,700 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF3-208ENST00000506783 LRRC14BA6NHZ5 514 aa9.76□□□□□ -0.85
PHF3-208ENST00000506783 CLGNO14967 610 aa9.76□□□□□ -0.85
PHF3-208ENST00000506783 GLRA3O75311 464 aa9.76□□□□□ -0.85
PHF3-208ENST00000506783 GJB3O75712 270 aa9.76□□□□□ -0.85
PHF3-208ENST00000506783 C22orf31O95567 290 aa9.76□□□□□ -0.85
PHF3-208ENST00000506783 IRF1P10914 325 aa9.76□□□□□ -0.85
PHF3-208ENST00000506783 CPB1P15086 417 aa9.76□□□□□ -0.85
PHF3-208ENST00000506783 ELNP15502 786 aa9.76□□□□□ -0.85
PHF3-208ENST00000506783 GP5P40197 560 aa9.76□□□□□ -0.85
PHF3-208ENST00000506783 CLCNKBP51801 687 aa9.76□□□□□ -0.85
PHF3-208ENST00000506783 ATN1P54259 1190 aaPredicted RBP9.76□□□□□ -0.85
PHF3-208ENST00000506783 FOLH1Q04609 750 aa9.76□□□□□ -0.85
PHF3-208ENST00000506783 ACVR2BQ13705 512 aa9.76□□□□□ -0.85
PHF3-208ENST00000506783 TEDDM1Q5T9Z0 273 aa9.76□□□□□ -0.85
PHF3-208ENST00000506783 NCBP2-AS2Q69YL0 99 aa9.76□□□□□ -0.85
PHF3-208ENST00000506783 NOTUMQ6P988 496 aa9.76□□□□□ -0.85
PHF3-208ENST00000506783 LCLAT1Q6UWP7 414 aa9.76□□□□□ -0.85
PHF3-208ENST00000506783 MCRS1Q96EZ8 462 aa9.76□□□□□ -0.85
PHF3-208ENST00000506783 SENP8Q96LD8 212 aa9.76□□□□□ -0.85
PHF3-208ENST00000506783 KCNK4Q9NYG8 393 aa9.76□□□□□ -0.85
PHF3-208ENST00000506783 CDH22Q9UJ99 828 aa9.76□□□□□ -0.85
PHF3-208ENST00000506783 SLC27A5Q9Y2P5 690 aa9.76□□□□□ -0.85
PHF3-208ENST00000506783 KCTD3Q9Y597 815 aa9.76□□□□□ -0.85
PHF3-208ENST00000506783 ZNF839A8K0R7 811 aa9.76□□□□□ -0.85
PHF3-208ENST00000506783 ZBTB42B2RXF5 422 aa9.76□□□□□ -0.85
PHF3-208ENST00000506783 PDLIM1O00151 329 aa9.76□□□□□ -0.85
PHF3-208ENST00000506783 NR5A2O00482 541 aa9.76□□□□□ -0.85
PHF3-208ENST00000506783 PLA2G6O60733 806 aa9.76□□□□□ -0.85
PHF3-208ENST00000506783 TRIM13O60858 407 aa9.76□□□□□ -0.85
PHF3-208ENST00000506783 YWHAQP27348 245 aa9.76□□□□□ -0.85
PHF3-208ENST00000506783 ARRB2P32121 409 aa9.76□□□□□ -0.85
PHF3-208ENST00000506783 THOP1P52888 689 aa9.76□□□□□ -0.85
PHF3-208ENST00000506783 TARBP2Q15633 366 aaKnown RBP9.76□□□□□ -0.85
PHF3-208ENST00000506783 CTC1Q2NKJ3 1217 aa9.76□□□□□ -0.85
PHF3-208ENST00000506783 DNAL1Q4LDG9 190 aa9.76□□□□□ -0.85
PHF3-208ENST00000506783 BTBD8Q5XKL5 378 aa9.76□□□□□ -0.85
PHF3-208ENST00000506783 RIOX2Q8IUF8 465 aa9.76□□□□□ -0.85
PHF3-208ENST00000506783 ATPAF2Q8N5M1 289 aa9.76□□□□□ -0.85
PHF3-208ENST00000506783 ST13P5Q8NFI4 369 aaPredicted RBP9.76□□□□□ -0.85
PHF3-208ENST00000506783 OR10Q1Q8NGQ4 319 aa9.76□□□□□ -0.85
PHF3-208ENST00000506783 DNAJB14Q8TBM8 379 aa9.76□□□□□ -0.85
PHF3-208ENST00000506783 MROH8Q9H579 483 aa9.76□□□□□ -0.85
PHF3-208ENST00000506783 ARMC7Q9H6L4 198 aa9.76□□□□□ -0.85
PHF3-208ENST00000506783 BPIFA1Q9NP55 256 aa9.76□□□□□ -0.85
PHF3-208ENST00000506783 EVLQ9UI08 416 aaPredicted RBP9.76□□□□□ -0.85
PHF3-208ENST00000506783 CORO1CQ9ULV4 474 aaPredicted RBP9.76□□□□□ -0.85
PHF3-208ENST00000506783 PCDHA11Q9Y5I1 949 aa9.76□□□□□ -0.85
PHF3-208ENST00000506783 NFASCO94856 1347 aa9.75□□□□□ -0.85
PHF3-208ENST00000506783 UBR3Q6ZT12 1888 aa9.75□□□□□ -0.85
PHF3-208ENST00000506783 M0QZ92 97 aa9.75□□□□□ -0.85
PHF3-208ENST00000506783 HNRNPRO43390 633 aaKnown RBP9.75□□□□□ -0.85
PHF3-208ENST00000506783 MAN1A2O60476 641 aa9.75□□□□□ -0.85
PHF3-208ENST00000506783 KATNA1O75449 491 aa9.75□□□□□ -0.85
PHF3-208ENST00000506783 GABBR2O75899 941 aa9.75□□□□□ -0.85
PHF3-208ENST00000506783 SIX3O95343 332 aaPredicted RBP9.75□□□□□ -0.85
PHF3-208ENST00000506783 PFKMP08237 780 aa9.75□□□□□ -0.85
PHF3-208ENST00000506783 PTPN1P18031 435 aaKnown RBP9.75□□□□□ -0.85
PHF3-208ENST00000506783 GNAZP19086 355 aa9.75□□□□□ -0.85
PHF3-208ENST00000506783 CHRM3P20309 590 aa9.75□□□□□ -0.85
PHF3-208ENST00000506783 ETV4P43268 484 aa9.75□□□□□ -0.85
PHF3-208ENST00000506783 SNX16P57768 344 aa9.75□□□□□ -0.85
PHF3-208ENST00000506783 NRG1Q02297 640 aaPredicted RBP9.75□□□□□ -0.85
PHF3-208ENST00000506783 EFEMP1Q12805 493 aa9.75□□□□□ -0.85
PHF3-208ENST00000506783 CYLC2Q14093 348 aaPredicted RBP9.75□□□□□ -0.85
PHF3-208ENST00000506783 PTK2BQ14289 1009 aa9.75□□□□□ -0.85
PHF3-208ENST00000506783 LSM12Q3MHD2 195 aaKnown RBP9.75□□□□□ -0.85
PHF3-208ENST00000506783 ZNF786Q8N393 782 aa9.75□□□□□ -0.85
PHF3-208ENST00000506783 SKA1Q96BD8 255 aa9.75□□□□□ -0.85
PHF3-208ENST00000506783 TNIP3Q96KP6 325 aa9.75□□□□□ -0.85
PHF3-208ENST00000506783 TMEM209Q96SK2 561 aa9.75□□□□□ -0.85
PHF3-208ENST00000506783 TUBB6Q9BUF5 446 aa9.75□□□□□ -0.85
PHF3-208ENST00000506783 MRPL1Q9BYD6 325 aaKnown RBP9.75□□□□□ -0.85
PHF3-208ENST00000506783 FAM96AQ9H5X1 160 aa9.75□□□□□ -0.85
PHF3-208ENST00000506783 CAMSAP3Q9P1Y5 1249 aaPredicted RBP9.75□□□□□ -0.85
PHF3-208ENST00000506783 CIDEBQ9UHD4 219 aa9.75□□□□□ -0.85
PHF3-208ENST00000506783 ZDHHC2Q9UIJ5 367 aa9.75□□□□□ -0.85
PHF3-208ENST00000506783 PCDHGC3Q9UN70 934 aa9.75□□□□□ -0.85
PHF3-208ENST00000506783 TIMM22Q9Y584 194 aa9.75□□□□□ -0.85
PHF3-208ENST00000506783 NME7Q9Y5B8 376 aa9.75□□□□□ -0.85
PHF3-208ENST00000506783 ACTL7AQ9Y615 435 aa9.75□□□□□ -0.85
PHF3-208ENST00000506783 TIPRLO75663 272 aa9.75□□□□□ -0.85
PHF3-208ENST00000506783 TM7SF2O76062 418 aa9.75□□□□□ -0.85
PHF3-208ENST00000506783 PRSS56P0CW18 603 aa9.75□□□□□ -0.85
PHF3-208ENST00000506783 CCDC166P0CW27 439 aa9.75□□□□□ -0.85
PHF3-208ENST00000506783 SMPD1P17405 629 aa9.75□□□□□ -0.85
PHF3-208ENST00000506783 TFEBP19484 476 aa9.75□□□□□ -0.85
PHF3-208ENST00000506783 ZBTB17Q13105 803 aa9.75□□□□□ -0.85
PHF3-208ENST00000506783 KLF10Q13118 480 aa9.75□□□□□ -0.85
PHF3-208ENST00000506783 ARL13BQ3SXY8 428 aa9.75□□□□□ -0.85
PHF3-208ENST00000506783 HSF5Q4G112 596 aaPredicted RBP9.75□□□□□ -0.85
PHF3-208ENST00000506783 C9orf57Q5W0N0 161 aa9.75□□□□□ -0.85
PHF3-208ENST00000506783 SPRYD7Q5W111 196 aa9.75□□□□□ -0.85
PHF3-208ENST00000506783 RBM44Q6ZP01 1051 aaKnown RBP9.75□□□□□ -0.85
PHF3-208ENST00000506783 PIM3Q86V86 326 aa9.75□□□□□ -0.85
PHF3-208ENST00000506783 OSTM1Q86WC4 334 aa9.75□□□□□ -0.85
PHF3-208ENST00000506783 PTCD3Q96EY7 689 aaKnown RBP9.75□□□□□ -0.85
PHF3-208ENST00000506783 HIC2Q96JB3 615 aa9.75□□□□□ -0.85
PHF3-208ENST00000506783 EPAS1Q99814 870 aa9.75□□□□□ -0.85
PHF3-208ENST00000506783 C1orf50Q9BV19 199 aa9.75□□□□□ -0.85
PHF3-208ENST00000506783 CCDC90BQ9GZT6 254 aa9.75□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms