RNA–Protein interactions for RNA: ENST00000506679.5

GYPB-207, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 606 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-207ENST00000506679 TRIM73Q86UV7 250 aa3.14□□□□□ -1.91
GYPB-207ENST00000506679 IGFN1Q86VF2 1251 aa3.14□□□□□ -1.91
GYPB-207ENST00000506679 CCDC25Q86WR0 208 aa3.14□□□□□ -1.91
GYPB-207ENST00000506679 SMAP1Q8IYB5 467 aaPredicted RBP3.14□□□□□ -1.91
GYPB-207ENST00000506679 ANKRD44Q8N8A2 993 aa3.14□□□□□ -1.91
GYPB-207ENST00000506679 CENPIQ92674 756 aaPredicted RBP3.14□□□□□ -1.91
GYPB-207ENST00000506679 USP13Q92995 863 aaPredicted RBP3.14□□□□□ -1.91
GYPB-207ENST00000506679 TEFMQ96QE5 360 aaKnown RBP3.14□□□□□ -1.91
GYPB-207ENST00000506679 XRN2Q9H0D6 950 aaKnown RBP eCLIP3.14□□□□□ -1.91
GYPB-207ENST00000506679 STN1Q9H668 368 aaKnown RBP3.14□□□□□ -1.91
GYPB-207ENST00000506679 TASP1Q9H6P5 420 aa3.14□□□□□ -1.91
GYPB-207ENST00000506679 DECR2Q9NUI1 292 aa3.14□□□□□ -1.91
GYPB-207ENST00000506679 RRN3Q9NYV6 651 aa3.14□□□□□ -1.91
GYPB-207ENST00000506679 GGA3Q9NZ52 723 aa3.14□□□□□ -1.91
GYPB-207ENST00000506679 GRHL1Q9NZI5 618 aa3.14□□□□□ -1.91
GYPB-207ENST00000506679 FBXO40Q9UH90 709 aa3.14□□□□□ -1.91
GYPB-207ENST00000506679 ICKQ9UPZ9 632 aa3.14□□□□□ -1.91
GYPB-207ENST00000506679 LRRFIP2Q9Y608 721 aaKnown RBP3.14□□□□□ -1.91
GYPB-207ENST00000506679 CKAP5Q14008 2032 aa3.14□□□□□ -1.91
GYPB-207ENST00000506679 OR6C68A6NDL8 312 aa3.13□□□□□ -1.91
GYPB-207ENST00000506679 KLK10O43240 276 aa3.13□□□□□ -1.91
GYPB-207ENST00000506679 PSG1P11464 419 aa3.13□□□□□ -1.91
GYPB-207ENST00000506679 TBXAS1P24557 533 aaPredicted RBP3.13□□□□□ -1.91
GYPB-207ENST00000506679 KLRC2P26717 231 aa3.13□□□□□ -1.91
GYPB-207ENST00000506679 TNFSF8P32971 234 aa3.13□□□□□ -1.91
GYPB-207ENST00000506679 POLD2P49005 469 aa3.13□□□□□ -1.91
GYPB-207ENST00000506679 PPM1FP49593 454 aaPredicted RBP3.13□□□□□ -1.91
GYPB-207ENST00000506679 RASSF2P50749 326 aa3.13□□□□□ -1.91
GYPB-207ENST00000506679 PLCD1P51178 756 aa3.13□□□□□ -1.91
GYPB-207ENST00000506679 VAMP2P63027 116 aa3.13□□□□□ -1.91
GYPB-207ENST00000506679 KHDRBS1Q07666 443 aaKnown RBP eCLIP3.13□□□□□ -1.915e-6■□□□□ 10.7
GYPB-207ENST00000506679 TBL3Q12788 808 aaKnown RBP3.13□□□□□ -1.91
GYPB-207ENST00000506679 AP5B1Q2VPB7 878 aa3.13□□□□□ -1.91
GYPB-207ENST00000506679 MANEAQ5SRI9 462 aa3.13□□□□□ -1.91
GYPB-207ENST00000506679 ATG16L1Q676U5 607 aa3.13□□□□□ -1.91
GYPB-207ENST00000506679 NUGGCQ68CJ6 796 aa3.13□□□□□ -1.91
GYPB-207ENST00000506679 RETSATQ6NUM9 610 aa3.13□□□□□ -1.91
GYPB-207ENST00000506679 B4GALNT4Q76KP1 1039 aa3.13□□□□□ -1.91
GYPB-207ENST00000506679 WDR5BQ86VZ2 330 aa3.13□□□□□ -1.91
GYPB-207ENST00000506679 ZNF354CQ86Y25 554 aa3.13□□□□□ -1.91
GYPB-207ENST00000506679 ZDHHC23Q8IYP9 409 aa3.13□□□□□ -1.91
GYPB-207ENST00000506679 FAM185AQ8N0U4 392 aa3.13□□□□□ -1.91
GYPB-207ENST00000506679 Q8N9P0 234 aaPredicted RBP3.13□□□□□ -1.91
GYPB-207ENST00000506679 CMASQ8NFW8 434 aaPredicted RBP3.13□□□□□ -1.91
GYPB-207ENST00000506679 BICD2Q8TD16 824 aa3.13□□□□□ -1.91
GYPB-207ENST00000506679 TMEM174Q8WUU8 243 aa3.13□□□□□ -1.91
GYPB-207ENST00000506679 PPM1EQ8WY54 764 aa3.13□□□□□ -1.91
GYPB-207ENST00000506679 INPP5DQ92835 1189 aa3.13□□□□□ -1.91
GYPB-207ENST00000506679 SH3KBP1Q96B97 665 aa3.13□□□□□ -1.91
GYPB-207ENST00000506679 NPLQ9BXD5 320 aaPredicted RBP3.13□□□□□ -1.91
GYPB-207ENST00000506679 B3GNT4Q9C0J1 378 aa3.13□□□□□ -1.91
GYPB-207ENST00000506679 LMAN2LQ9H0V9 348 aa3.13□□□□□ -1.91
GYPB-207ENST00000506679 TTC12Q9H892 705 aaPredicted RBP3.13□□□□□ -1.91
GYPB-207ENST00000506679 FZD3Q9NPG1 666 aa3.13□□□□□ -1.91
GYPB-207ENST00000506679 ATP8A2Q9NTI2 1148 aa3.13□□□□□ -1.91
GYPB-207ENST00000506679 POT1Q9NUX5 634 aa3.13□□□□□ -1.91
GYPB-207ENST00000506679 PDP2Q9P2J9 529 aa3.13□□□□□ -1.91
GYPB-207ENST00000506679 NOL12Q9UGY1 213 aaKnown RBP eCLIP3.13□□□□□ -1.91
GYPB-207ENST00000506679 RAI2Q9Y5P3 530 aa3.13□□□□□ -1.91
GYPB-207ENST00000506679 SLC4A4Q9Y6R1 1079 aa3.13□□□□□ -1.91
GYPB-207ENST00000506679 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP3.12□□□□□ -1.91
GYPB-207ENST00000506679 SH2D7A6NKC9 451 aaPredicted RBP3.12□□□□□ -1.91
GYPB-207ENST00000506679 SPTLC2O15270 562 aa3.12□□□□□ -1.91
GYPB-207ENST00000506679 RNMTO43148 476 aaKnown RBP3.12□□□□□ -1.91
GYPB-207ENST00000506679 HOXC11O43248 304 aaPredicted RBP3.12□□□□□ -1.91
GYPB-207ENST00000506679 HBP1O60381 514 aa3.12□□□□□ -1.91
GYPB-207ENST00000506679 TMCC1O94876 653 aa3.12□□□□□ -1.91
GYPB-207ENST00000506679 CHRM4P08173 479 aa3.12□□□□□ -1.91
GYPB-207ENST00000506679 MYZAPP0CAP1 466 aa3.12□□□□□ -1.91
GYPB-207ENST00000506679 HOXB2P14652 356 aa3.12□□□□□ -1.91
GYPB-207ENST00000506679 CPA1P15085 419 aa3.12□□□□□ -1.91
GYPB-207ENST00000506679 PTPN9P43378 593 aa3.12□□□□□ -1.91
GYPB-207ENST00000506679 CLCNKBP51801 687 aa3.12□□□□□ -1.91
GYPB-207ENST00000506679 GAD2Q05329 585 aa3.12□□□□□ -1.91
GYPB-207ENST00000506679 TAF12Q16514 161 aa3.12□□□□□ -1.91
GYPB-207ENST00000506679 SLC18A3Q16572 532 aa3.12□□□□□ -1.91
GYPB-207ENST00000506679 DUSP6Q16828 381 aa3.12□□□□□ -1.91
GYPB-207ENST00000506679 Q5PR19 223 aa3.12□□□□□ -1.91
GYPB-207ENST00000506679 HMBOX1Q6NT76 420 aa3.12□□□□□ -1.91
GYPB-207ENST00000506679 TMEM71Q6P5X7 295 aa3.12□□□□□ -1.91
GYPB-207ENST00000506679 COLCA1Q6ZS62 124 aa3.12□□□□□ -1.91
GYPB-207ENST00000506679 TRAPPC11Q7Z392 1133 aa3.12□□□□□ -1.91
GYPB-207ENST00000506679 TECPR1Q7Z6L1 1165 aa3.12□□□□□ -1.91
GYPB-207ENST00000506679 TMTC1Q8IUR5 882 aa3.12□□□□□ -1.91
GYPB-207ENST00000506679 ENGASEQ8NFI3 743 aa3.12□□□□□ -1.91
GYPB-207ENST00000506679 OR4N2Q8NGD1 307 aa3.12□□□□□ -1.91
GYPB-207ENST00000506679 RAB40AQ8WXH6 277 aa3.12□□□□□ -1.91
GYPB-207ENST00000506679 ZNF419Q96HQ0 510 aaPredicted RBP3.12□□□□□ -1.91
GYPB-207ENST00000506679 MAELQ96JY0 434 aaKnown RBP3.12□□□□□ -1.91
GYPB-207ENST00000506679 NLRP4Q96MN2 994 aa3.12□□□□□ -1.91
GYPB-207ENST00000506679 WDR77Q9BQA1 342 aaPredicted RBP3.12□□□□□ -1.91
GYPB-207ENST00000506679 IFT27Q9BW83 186 aa3.12□□□□□ -1.91
GYPB-207ENST00000506679 TAOK3Q9H2K8 898 aa3.12□□□□□ -1.91
GYPB-207ENST00000506679 KLHL31Q9H511 634 aa3.12□□□□□ -1.91
GYPB-207ENST00000506679 NLKQ9UBE8 527 aa3.12□□□□□ -1.91
GYPB-207ENST00000506679 ARID4BQ4LE39 1312 aaPredicted RBP3.12□□□□□ -1.91
GYPB-207ENST00000506679 A0A1B0GVC2 190 aa3.11□□□□□ -1.91
GYPB-207ENST00000506679 TARSL2A2RTX5 802 aaKnown RBP3.11□□□□□ -1.91
GYPB-207ENST00000506679 RRN3P2A6NIE6 340 aa3.11□□□□□ -1.91
GYPB-207ENST00000506679 PEX12O00623 359 aa3.11□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms