RNA–Protein interactions for RNA: ENST00000506515.1

HERC4-213, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 4

Gene HERC4, Length 540 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-213ENST00000506515 MRIQ9BWK5 157 aa6.44□□□□□ -1.38
HERC4-213ENST00000506515 CADM1Q9BY67 442 aaKnown RBP6.44□□□□□ -1.38
HERC4-213ENST00000506515 PDGFCQ9NRA1 345 aa6.44□□□□□ -1.38
HERC4-213ENST00000506515 CYP46A1Q9Y6A2 500 aa6.44□□□□□ -1.38
HERC4-213ENST00000506515 ZNF335Q9H4Z2 1342 aaPredicted RBP6.44□□□□□ -1.38
HERC4-213ENST00000506515 MSI1O43347 362 aaKnown RBP6.43□□□□□ -1.38
HERC4-213ENST00000506515 TBX18O95935 607 aa6.43□□□□□ -1.38
HERC4-213ENST00000506515 PAFAH1B1P43034 410 aa6.43□□□□□ -1.38
HERC4-213ENST00000506515 RHAGQ02094 409 aa6.43□□□□□ -1.38
HERC4-213ENST00000506515 SIM2Q14190 667 aaPredicted RBP6.43□□□□□ -1.38
HERC4-213ENST00000506515 BAK1Q16611 211 aa6.43□□□□□ -1.38
HERC4-213ENST00000506515 NAPEPLDQ6IQ20 393 aa6.43□□□□□ -1.38
HERC4-213ENST00000506515 FAM180BQ6P0A1 224 aa6.43□□□□□ -1.38
HERC4-213ENST00000506515 MIS18BP1Q6P0N0 1132 aa6.43□□□□□ -1.38
HERC4-213ENST00000506515 ADGRF4Q8IZF3 695 aa6.43□□□□□ -1.38
HERC4-213ENST00000506515 TMEM217Q8N7C4 229 aa6.43□□□□□ -1.38
HERC4-213ENST00000506515 RFWD2Q8NHY2 731 aa6.43□□□□□ -1.38
HERC4-213ENST00000506515 SH3KBP1Q96B97 665 aa6.43□□□□□ -1.38
HERC4-213ENST00000506515 ELP4Q96EB1 424 aa6.43□□□□□ -1.38
HERC4-213ENST00000506515 SORCS2Q96PQ0 1159 aa6.43□□□□□ -1.38
HERC4-213ENST00000506515 FUZQ9BT04 418 aa6.43□□□□□ -1.38
HERC4-213ENST00000506515 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP6.43□□□□□ -1.38
HERC4-213ENST00000506515 NPLQ9BXD5 320 aaPredicted RBP6.43□□□□□ -1.38
HERC4-213ENST00000506515 INTS2Q9H0H0 1204 aaKnown RBP6.43□□□□□ -1.38
HERC4-213ENST00000506515 TTC12Q9H892 705 aaPredicted RBP6.43□□□□□ -1.38
HERC4-213ENST00000506515 Q9N2J8 555 aa6.43□□□□□ -1.38
HERC4-213ENST00000506515 KLHL13Q9P2N7 655 aa6.43□□□□□ -1.38
HERC4-213ENST00000506515 HDAC6Q9UBN7 1215 aa6.43□□□□□ -1.38
HERC4-213ENST00000506515 UPB1Q9UBR1 384 aa6.43□□□□□ -1.38
HERC4-213ENST00000506515 CPS1P31327 1500 aa6.43□□□□□ -1.38
HERC4-213ENST00000506515 SAMD9Q5K651 1589 aa6.43□□□□□ -1.38
HERC4-213ENST00000506515 CYP2D7A0A087X1C5 515 aa6.42□□□□□ -1.38
HERC4-213ENST00000506515 KCNJ18B7U540 433 aa6.42□□□□□ -1.38
HERC4-213ENST00000506515 TNPO2O14787 897 aaKnown RBP6.42□□□□□ -1.38
HERC4-213ENST00000506515 SPTLC2O15270 562 aa6.42□□□□□ -1.38
HERC4-213ENST00000506515 USP12O75317 370 aa6.42□□□□□ -1.38
HERC4-213ENST00000506515 PRKCGP05129 697 aa6.42□□□□□ -1.38
HERC4-213ENST00000506515 CD63P08962 238 aa6.42□□□□□ -1.38
HERC4-213ENST00000506515 FCGR2AP12318 317 aa6.42□□□□□ -1.38
HERC4-213ENST00000506515 CDH15P55291 814 aa6.42□□□□□ -1.38
HERC4-213ENST00000506515 GALNT3Q14435 633 aa6.42□□□□□ -1.38
HERC4-213ENST00000506515 SEMA3AQ14563 771 aa6.42□□□□□ -1.38
HERC4-213ENST00000506515 MAPRE1Q15691 268 aaKnown RBP6.42□□□□□ -1.38
HERC4-213ENST00000506515 FAM69AQ5T7M9 428 aa6.42□□□□□ -1.38
HERC4-213ENST00000506515 NAA35Q5VZE5 725 aa6.42□□□□□ -1.38
HERC4-213ENST00000506515 TMED8Q6PL24 325 aaPredicted RBP6.42□□□□□ -1.38
HERC4-213ENST00000506515 ZNF66Q6ZN08 573 aa6.42□□□□□ -1.38
HERC4-213ENST00000506515 EYA3Q99504 573 aa6.42□□□□□ -1.38
HERC4-213ENST00000506515 CLSTN3Q9BQT9 956 aa6.42□□□□□ -1.38
HERC4-213ENST00000506515 SH2D3AQ9BRG2 576 aa6.42□□□□□ -1.38
HERC4-213ENST00000506515 SCNM1Q9BWG6 230 aa6.42□□□□□ -1.38
HERC4-213ENST00000506515 LMAN2LQ9H0V9 348 aa6.42□□□□□ -1.38
HERC4-213ENST00000506515 TMPRSS5Q9H3S3 457 aa6.42□□□□□ -1.38
HERC4-213ENST00000506515 MOV10Q9HCE1 1003 aaKnown RBP6.42□□□□□ -1.38
HERC4-213ENST00000506515 SPAG9O60271 1321 aaKnown RBP6.42□□□□□ -1.38
HERC4-213ENST00000506515 WDR17Q8IZU2 1322 aa6.42□□□□□ -1.38
HERC4-213ENST00000506515 CAMSAP1Q5T5Y3 1602 aa6.42□□□□□ -1.38
HERC4-213ENST00000506515 C17orf100A8MU93 164 aa6.41□□□□□ -1.38
HERC4-213ENST00000506515 B4E171 279 aa6.41□□□□□ -1.38
HERC4-213ENST00000506515 PER2O15055 1255 aa6.41□□□□□ -1.38
HERC4-213ENST00000506515 STRNO43815 780 aa6.41□□□□□ -1.38
HERC4-213ENST00000506515 HBP1O60381 514 aa6.41□□□□□ -1.38
HERC4-213ENST00000506515 CBX6O95503 412 aa6.41□□□□□ -1.38
HERC4-213ENST00000506515 HLA-DQA2P01906 255 aa6.41□□□□□ -1.38
HERC4-213ENST00000506515 TFEBP19484 476 aa6.41□□□□□ -1.38
HERC4-213ENST00000506515 MPGP29372 298 aa6.41□□□□□ -1.38
HERC4-213ENST00000506515 GJC1P36383 396 aa6.41□□□□□ -1.38
HERC4-213ENST00000506515 TSPAN7P41732 249 aa6.41□□□□□ -1.38
HERC4-213ENST00000506515 GPD2P43304 727 aa6.41□□□□□ -1.38
HERC4-213ENST00000506515 PTPN9P43378 593 aa6.41□□□□□ -1.38
HERC4-213ENST00000506515 MTNR1AP48039 350 aa6.41□□□□□ -1.38
HERC4-213ENST00000506515 CCT4P50991 539 aaKnown RBP6.41□□□□□ -1.38
HERC4-213ENST00000506515 SLC12A2P55011 1212 aa6.41□□□□□ -1.38
HERC4-213ENST00000506515 CAMK1Q14012 370 aa6.41□□□□□ -1.38
HERC4-213ENST00000506515 PGM5Q15124 567 aa6.41□□□□□ -1.38
HERC4-213ENST00000506515 CEP78Q5JTW2 689 aa6.41□□□□□ -1.38
HERC4-213ENST00000506515 GJB7Q6PEY0 223 aa6.41□□□□□ -1.38
HERC4-213ENST00000506515 MON1AQ86VX9 555 aa6.41□□□□□ -1.38
HERC4-213ENST00000506515 ADGRG3Q86Y34 549 aa6.41□□□□□ -1.38
HERC4-213ENST00000506515 SCAIQ8N9R8 606 aa6.41□□□□□ -1.38
HERC4-213ENST00000506515 UCMAQ8WVF2 138 aa6.41□□□□□ -1.38
HERC4-213ENST00000506515 CNOT9Q92600 299 aaKnown RBP6.41□□□□□ -1.38
HERC4-213ENST00000506515 HDAC2Q92769 488 aaKnown RBP6.41□□□□□ -1.38
HERC4-213ENST00000506515 KAT2AQ92830 837 aa6.41□□□□□ -1.38
HERC4-213ENST00000506515 NELL1Q92832 810 aa6.41□□□□□ -1.38
HERC4-213ENST00000506515 MPHOSPH8Q99549 860 aa6.41□□□□□ -1.38
HERC4-213ENST00000506515 KRTAP4-5Q9BYR2 181 aa6.41□□□□□ -1.38
HERC4-213ENST00000506515 XRN2Q9H0D6 950 aaKnown RBP eCLIP6.41□□□□□ -1.38
HERC4-213ENST00000506515 VEZTQ9HBM0 779 aa6.41□□□□□ -1.38
HERC4-213ENST00000506515 DHDHQ9UQ10 334 aa6.41□□□□□ -1.38
HERC4-213ENST00000506515 ARHGAP5Q13017 1502 aa6.4□□□□□ -1.38
HERC4-213ENST00000506515 C3P01024 1663 aa6.4□□□□□ -1.38
HERC4-213ENST00000506515 C2CD4BA6NLJ0 364 aa6.4□□□□□ -1.38
HERC4-213ENST00000506515 TSPAN4O14817 238 aa6.4□□□□□ -1.38
HERC4-213ENST00000506515 CHRNA5P30532 468 aa6.4□□□□□ -1.38
HERC4-213ENST00000506515 STAT1P42224 750 aa6.4□□□□□ -1.38
HERC4-213ENST00000506515 CYP2J2P51589 502 aa6.4□□□□□ -1.38
HERC4-213ENST00000506515 HSF1Q00613 529 aa6.4□□□□□ -1.38
HERC4-213ENST00000506515 SLC10A2Q12908 348 aaPredicted RBP6.4□□□□□ -1.38
HERC4-213ENST00000506515 STIM1Q13586 685 aa6.4□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms