RNA–Protein interactions for RNA: ENST00000506426.1

TRAPPC11-205, Transcript of trafficking protein particle complex 11, humanhuman

TSL 2

Gene TRAPPC11, Length 395 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-205ENST00000506426 KAZALD1Q96I82 304 aa3.48□□□□□ -1.85
TRAPPC11-205ENST00000506426 ZNF845Q96IR2 970 aaPredicted RBP3.48□□□□□ -1.85
TRAPPC11-205ENST00000506426 GPR78Q96P69 363 aa3.48□□□□□ -1.85
TRAPPC11-205ENST00000506426 NR1H4Q96RI1 486 aaPredicted RBP3.48□□□□□ -1.85
TRAPPC11-205ENST00000506426 MMS19Q96T76 1030 aa3.48□□□□□ -1.85
TRAPPC11-205ENST00000506426 ABHD14AQ9BUJ0 271 aa3.48□□□□□ -1.85
TRAPPC11-205ENST00000506426 ITPAQ9BY32 194 aa3.48□□□□□ -1.85
TRAPPC11-205ENST00000506426 TRIM2Q9C040 744 aa3.48□□□□□ -1.85
TRAPPC11-205ENST00000506426 CIPCQ9C0C6 399 aa3.48□□□□□ -1.85
TRAPPC11-205ENST00000506426 RANBP17Q9H2T7 1088 aaKnown RBP3.48□□□□□ -1.85
TRAPPC11-205ENST00000506426 TTYH1Q9H313 450 aaPredicted RBP3.48□□□□□ -1.85
TRAPPC11-205ENST00000506426 SEPT11Q9NVA2 429 aaKnown RBP3.48□□□□□ -1.85
TRAPPC11-205ENST00000506426 SMPD4Q9NXE4 827 aa3.48□□□□□ -1.85
TRAPPC11-205ENST00000506426 ZDHHC7Q9NXF8 308 aa3.48□□□□□ -1.85
TRAPPC11-205ENST00000506426 GAR1Q9NY12 217 aaKnown RBP3.48□□□□□ -1.85
TRAPPC11-205ENST00000506426 IL1RAPL1Q9NZN1 696 aa3.48□□□□□ -1.85
TRAPPC11-205ENST00000506426 MPP6Q9NZW5 540 aa3.48□□□□□ -1.85
TRAPPC11-205ENST00000506426 SEMA5BQ9P283 1151 aa3.48□□□□□ -1.85
TRAPPC11-205ENST00000506426 LRIT1Q9P2V4 623 aa3.48□□□□□ -1.85
TRAPPC11-205ENST00000506426 TBC1D29Q9UFV1 150 aa3.48□□□□□ -1.85
TRAPPC11-205ENST00000506426 HEMK1Q9Y5R4 338 aaPredicted RBP3.48□□□□□ -1.85
TRAPPC11-205ENST00000506426 LYVE1Q9Y5Y7 322 aa3.48□□□□□ -1.85
TRAPPC11-205ENST00000506426 MROH1Q8NDA8 1641 aa3.48□□□□□ -1.85
TRAPPC11-205ENST00000506426 ERVK-7P63135 1459 aa3.47□□□□□ -1.85
TRAPPC11-205ENST00000506426 LRRC9Q6ZRR7 1453 aa3.47□□□□□ -1.85
TRAPPC11-205ENST00000506426 RTEL1-TNFRSF6BF6WH68 1400 aa3.47□□□□□ -1.85
TRAPPC11-205ENST00000506426 VPS8Q8N3P4 1428 aa3.47□□□□□ -1.85
TRAPPC11-205ENST00000506426 MIA2Q96PC5 1412 aa3.47□□□□□ -1.85
TRAPPC11-205ENST00000506426 NPIPB15A6NHN6 443 aaPredicted RBP3.47□□□□□ -1.85
TRAPPC11-205ENST00000506426 C16orf96A6NNT2 1141 aa3.47□□□□□ -1.85
TRAPPC11-205ENST00000506426 GCOM1H8Y6P7 765 aaPredicted RBP3.47□□□□□ -1.85
TRAPPC11-205ENST00000506426 PRYO14603 147 aa3.47□□□□□ -1.85
TRAPPC11-205ENST00000506426 PER2O15055 1255 aa3.47□□□□□ -1.85
TRAPPC11-205ENST00000506426 TNFSF14O43557 240 aa3.47□□□□□ -1.85
TRAPPC11-205ENST00000506426 AHCYL1O43865 530 aa3.47□□□□□ -1.85
TRAPPC11-205ENST00000506426 HBP1O60381 514 aa3.47□□□□□ -1.85
TRAPPC11-205ENST00000506426 PLOD3O60568 738 aa3.47□□□□□ -1.85
TRAPPC11-205ENST00000506426 EXOC3O60645 756 aa3.47□□□□□ -1.85
TRAPPC11-205ENST00000506426 TSPAN9O75954 239 aa3.47□□□□□ -1.85
TRAPPC11-205ENST00000506426 SGPL1O95470 568 aa3.47□□□□□ -1.85
TRAPPC11-205ENST00000506426 ENO1P06733 434 aaKnown RBP3.47□□□□□ -1.85
TRAPPC11-205ENST00000506426 CHRM4P08173 479 aa3.47□□□□□ -1.85
TRAPPC11-205ENST00000506426 ADH4P08319 380 aa3.47□□□□□ -1.85
TRAPPC11-205ENST00000506426 C1SP09871 688 aa3.47□□□□□ -1.85
TRAPPC11-205ENST00000506426 APEHP13798 732 aaKnown RBP3.47□□□□□ -1.85
TRAPPC11-205ENST00000506426 TGM2P21980 687 aa3.47□□□□□ -1.85
TRAPPC11-205ENST00000506426 NFKBIAP25963 317 aa3.47□□□□□ -1.85
TRAPPC11-205ENST00000506426 ABCD1P33897 745 aa3.47□□□□□ -1.85
TRAPPC11-205ENST00000506426 BSGP35613 385 aa3.47□□□□□ -1.85
TRAPPC11-205ENST00000506426 KRT20P35900 424 aa3.47□□□□□ -1.85
TRAPPC11-205ENST00000506426 GJC1P36383 396 aa3.47□□□□□ -1.85
TRAPPC11-205ENST00000506426 RGS2P41220 211 aa3.47□□□□□ -1.85
TRAPPC11-205ENST00000506426 AVPR1BP47901 424 aa3.47□□□□□ -1.85
TRAPPC11-205ENST00000506426 CPA2P48052 419 aa3.47□□□□□ -1.85
TRAPPC11-205ENST00000506426 CTCFP49711 727 aaPredicted RBP3.47□□□□□ -1.85
TRAPPC11-205ENST00000506426 CCT8P50990 548 aa3.47□□□□□ -1.85
TRAPPC11-205ENST00000506426 ADPRHP54922 357 aa3.47□□□□□ -1.85
TRAPPC11-205ENST00000506426 EIF3BP55884 814 aaKnown RBP3.47□□□□□ -1.85
TRAPPC11-205ENST00000506426 RPL7AP62424 266 aaKnown RBP3.47□□□□□ -1.85
TRAPPC11-205ENST00000506426 TAP1Q03518 808 aa3.47□□□□□ -1.85
TRAPPC11-205ENST00000506426 NEXNQ0ZGT2 675 aa3.47□□□□□ -1.85
TRAPPC11-205ENST00000506426 TUBA3CQ13748 450 aa3.47□□□□□ -1.85
TRAPPC11-205ENST00000506426 WTAPQ15007 396 aa3.47□□□□□ -1.85
TRAPPC11-205ENST00000506426 ZXDCQ2QGD7 858 aaPredicted RBP3.47□□□□□ -1.85
TRAPPC11-205ENST00000506426 AP5B1Q2VPB7 878 aa3.47□□□□□ -1.85
TRAPPC11-205ENST00000506426 FAM153CQ494X1 144 aa3.47□□□□□ -1.85
TRAPPC11-205ENST00000506426 SPDYAQ5MJ70 313 aa3.47□□□□□ -1.85
TRAPPC11-205ENST00000506426 UBAP2Q5T6F2 1119 aaKnown RBP3.47□□□□□ -1.85
TRAPPC11-205ENST00000506426 GJB7Q6PEY0 223 aa3.47□□□□□ -1.85
TRAPPC11-205ENST00000506426 TUBA3EQ6PEY2 450 aa3.47□□□□□ -1.85
TRAPPC11-205ENST00000506426 TMCO3Q6UWJ1 677 aa3.47□□□□□ -1.85
TRAPPC11-205ENST00000506426 RNF207Q6ZRF8 634 aa3.47□□□□□ -1.85
TRAPPC11-205ENST00000506426 ENOSF1Q7L5Y1 443 aa3.47□□□□□ -1.85
TRAPPC11-205ENST00000506426 BCDIN3DQ7Z5W3 292 aaKnown RBP3.47□□□□□ -1.85
TRAPPC11-205ENST00000506426 MRGPREQ86SM8 312 aa3.47□□□□□ -1.85
TRAPPC11-205ENST00000506426 PEG10Q86TG7 708 aaKnown RBP3.47□□□□□ -1.85
TRAPPC11-205ENST00000506426 ADGRF3Q8IZF5 1079 aa3.47□□□□□ -1.85
TRAPPC11-205ENST00000506426 CNTROBQ8N137 903 aa3.47□□□□□ -1.85
TRAPPC11-205ENST00000506426 SLC44A3Q8N4M1 653 aa3.47□□□□□ -1.85
TRAPPC11-205ENST00000506426 TTC39CQ8N584 583 aa3.47□□□□□ -1.85
TRAPPC11-205ENST00000506426 LSMEM1Q8N8F7 131 aa3.47□□□□□ -1.85
TRAPPC11-205ENST00000506426 CACTINQ8WUQ7 758 aaKnown RBP3.47□□□□□ -1.85
TRAPPC11-205ENST00000506426 RAB40AQ8WXH6 277 aa3.47□□□□□ -1.85
TRAPPC11-205ENST00000506426 TBC1D5Q92609 795 aa3.47□□□□□ -1.85
TRAPPC11-205ENST00000506426 CCDC17Q96LX7 622 aa3.47□□□□□ -1.85
TRAPPC11-205ENST00000506426 COQ10AQ96MF6 247 aa3.47□□□□□ -1.85
TRAPPC11-205ENST00000506426 CLSTN3Q9BQT9 956 aa3.47□□□□□ -1.85
TRAPPC11-205ENST00000506426 MUC13Q9H3R2 512 aa3.47□□□□□ -1.85
TRAPPC11-205ENST00000506426 EPHX3Q9H6B9 360 aa3.47□□□□□ -1.85
TRAPPC11-205ENST00000506426 BRF2Q9HAW0 419 aa3.47□□□□□ -1.85
TRAPPC11-205ENST00000506426 SLC2A4RGQ9NR83 387 aa3.47□□□□□ -1.85
TRAPPC11-205ENST00000506426 PCDHB16Q9NRJ7 776 aa3.47□□□□□ -1.85
TRAPPC11-205ENST00000506426 ASNSD1Q9NWL6 643 aa3.47□□□□□ -1.85
TRAPPC11-205ENST00000506426 HCFC1R1Q9NWW0 138 aa3.47□□□□□ -1.85
TRAPPC11-205ENST00000506426 BCCIPQ9P287 314 aaKnown RBP eCLIP3.47□□□□□ -1.85
TRAPPC11-205ENST00000506426 ADD3Q9UEY8 706 aaKnown RBP3.47□□□□□ -1.85
TRAPPC11-205ENST00000506426 REXO2Q9Y3B8 237 aaKnown RBP3.47□□□□□ -1.85
TRAPPC11-205ENST00000506426 PKP3Q9Y446 797 aa3.47□□□□□ -1.85
TRAPPC11-205ENST00000506426 SIRT4Q9Y6E7 314 aaPredicted RBP3.47□□□□□ -1.85
TRAPPC11-205ENST00000506426 CPS1P31327 1500 aa3.47□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms