RNA–Protein interactions for RNA: ENST00000504443.6

COL6A4P2-202, Transcript of collagen type VI alpha 4 pseudogene 2, humanhuman

BASIC

Gene COL6A4P2, Length 2,753 nt, Biotype transcribed unitary pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A4P2-202ENST00000504443 IRF9Q00978 393 aa14.4□□□□□ -0.1
COL6A4P2-202ENST00000504443 MERTKQ12866 999 aa14.4□□□□□ -0.1
COL6A4P2-202ENST00000504443 DMP1Q13316 513 aaPredicted RBP14.4□□□□□ -0.1
COL6A4P2-202ENST00000504443 TAZQ16635 292 aa14.4□□□□□ -0.1
COL6A4P2-202ENST00000504443 LRRC8EQ6NSJ5 796 aa14.4□□□□□ -0.1
COL6A4P2-202ENST00000504443 USP37Q86T82 979 aa14.4□□□□□ -0.1
COL6A4P2-202ENST00000504443 OR5B17Q8NGF7 314 aa14.4□□□□□ -0.1
COL6A4P2-202ENST00000504443 ADAMTS16Q8TE57 1224 aa14.4□□□□□ -0.1
COL6A4P2-202ENST00000504443 TFAP2BQ92481 460 aa14.4□□□□□ -0.1
COL6A4P2-202ENST00000504443 ASB9Q96DX5 294 aa14.4□□□□□ -0.1
COL6A4P2-202ENST00000504443 SH3YL1Q96HL8 342 aaPredicted RBP14.4□□□□□ -0.1
COL6A4P2-202ENST00000504443 CCDC17Q96LX7 622 aa14.4□□□□□ -0.1
COL6A4P2-202ENST00000504443 DHX35Q9H5Z1 703 aaKnown RBP14.4□□□□□ -0.1
COL6A4P2-202ENST00000504443 NOL6Q9H6R4 1146 aaKnown RBP14.4□□□□□ -0.1
COL6A4P2-202ENST00000504443 MARCH7Q9H992 704 aa14.4□□□□□ -0.1
COL6A4P2-202ENST00000504443 IPO11Q9UI26 975 aaKnown RBP14.4□□□□□ -0.1
COL6A4P2-202ENST00000504443 GGA1Q9UJY5 639 aa14.4□□□□□ -0.1
COL6A4P2-202ENST00000504443 ADAMTSL1Q8N6G6 1762 aa14.4□□□□□ -0.1
COL6A4P2-202ENST00000504443 FAM155AB1AL88 458 aaPredicted RBP14.4□□□□□ -0.1
COL6A4P2-202ENST00000504443 H0YJX3 145 aa14.4□□□□□ -0.1
COL6A4P2-202ENST00000504443 CLOCKO15516 846 aa14.4□□□□□ -0.1
COL6A4P2-202ENST00000504443 CDH6P55285 790 aa14.4□□□□□ -0.1
COL6A4P2-202ENST00000504443 PRR5LQ6MZQ0 368 aa14.4□□□□□ -0.1
COL6A4P2-202ENST00000504443 PPP4R4Q6NUP7 873 aa14.4□□□□□ -0.1
COL6A4P2-202ENST00000504443 TAS1R3Q7RTX0 852 aa14.4□□□□□ -0.1
COL6A4P2-202ENST00000504443 REM2Q8IYK8 340 aaPredicted RBP14.4□□□□□ -0.1
COL6A4P2-202ENST00000504443 THNSL1Q8IYQ7 743 aa14.4□□□□□ -0.1
COL6A4P2-202ENST00000504443 KIAA2013Q8IYS2 634 aa14.4□□□□□ -0.1
COL6A4P2-202ENST00000504443 PQLC3Q8N755 202 aa14.4□□□□□ -0.1
COL6A4P2-202ENST00000504443 NIPA2Q8N8Q9 360 aa14.4□□□□□ -0.1
COL6A4P2-202ENST00000504443 CXorf38Q8TB03 319 aa14.4□□□□□ -0.1
COL6A4P2-202ENST00000504443 UNKQ9C0B0 810 aaKnown RBP14.4□□□□□ -0.1
COL6A4P2-202ENST00000504443 CAB39LQ9H9S4 337 aa14.4□□□□□ -0.1
COL6A4P2-202ENST00000504443 PCDHGC3Q9UN70 934 aa14.4□□□□□ -0.1
COL6A4P2-202ENST00000504443 GPSM3Q9Y4H4 160 aa14.4□□□□□ -0.1
COL6A4P2-202ENST00000504443 PCDHGA7Q9Y5G6 932 aa14.4□□□□□ -0.1
COL6A4P2-202ENST00000504443 TNFRSF10AO00220 468 aa14.39□□□□□ -0.11
COL6A4P2-202ENST00000504443 AURKAO14965 403 aa14.39□□□□□ -0.11
COL6A4P2-202ENST00000504443 KRT7P08729 469 aa14.39□□□□□ -0.11
COL6A4P2-202ENST00000504443 SPCS2Q15005 226 aa14.39□□□□□ -0.11
COL6A4P2-202ENST00000504443 NOMO1Q15155 1222 aa14.39□□□□□ -0.11
COL6A4P2-202ENST00000504443 HADHQ16836 314 aaKnown RBP14.39□□□□□ -0.11
COL6A4P2-202ENST00000504443 PTPN20Q4JDL3 420 aa14.39□□□□□ -0.11
COL6A4P2-202ENST00000504443 TIFABQ6ZNK6 161 aa14.39□□□□□ -0.11
COL6A4P2-202ENST00000504443 EPHX4Q8IUS5 362 aa14.39□□□□□ -0.11
COL6A4P2-202ENST00000504443 SNX19Q92543 992 aa14.39□□□□□ -0.11
COL6A4P2-202ENST00000504443 RPL10LQ96L21 214 aaKnown RBP14.39□□□□□ -0.11
COL6A4P2-202ENST00000504443 PEBP4Q96S96 227 aa14.39□□□□□ -0.11
COL6A4P2-202ENST00000504443 GATA5Q9BWX5 397 aaPredicted RBP14.39□□□□□ -0.11
COL6A4P2-202ENST00000504443 PARVBQ9HBI1 364 aa14.39□□□□□ -0.11
COL6A4P2-202ENST00000504443 GPATCH2LQ9NWQ4 482 aa14.39□□□□□ -0.11
COL6A4P2-202ENST00000504443 ARHGAP28Q9P2N2 729 aa14.39□□□□□ -0.11
COL6A4P2-202ENST00000504443 CYTH4Q9UIA0 394 aa14.39□□□□□ -0.11
COL6A4P2-202ENST00000504443 FIS1Q9Y3D6 152 aa14.39□□□□□ -0.11
COL6A4P2-202ENST00000504443 TCAF1Q9Y4C2 921 aa14.39□□□□□ -0.11
COL6A4P2-202ENST00000504443 COPG1Q9Y678 874 aaKnown RBP14.39□□□□□ -0.11
COL6A4P2-202ENST00000504443 TLL2Q9Y6L7 1015 aa14.39□□□□□ -0.11
COL6A4P2-202ENST00000504443 TMEM233B4DJY2 109 aa14.39□□□□□ -0.11
COL6A4P2-202ENST00000504443 ERVK-10P10266 1014 aa14.39□□□□□ -0.11
COL6A4P2-202ENST00000504443 HSPA8P11142 646 aaKnown RBP14.39□□□□□ -0.11
COL6A4P2-202ENST00000504443 MYF6P23409 242 aa14.39□□□□□ -0.11
COL6A4P2-202ENST00000504443 SESN2P58004 480 aaPredicted RBP14.39□□□□□ -0.11
COL6A4P2-202ENST00000504443 SLC27A3Q5K4L6 730 aa14.39□□□□□ -0.11
COL6A4P2-202ENST00000504443 C15orf52Q6ZUT6 534 aaKnown RBP14.39□□□□□ -0.11
COL6A4P2-202ENST00000504443 OTUD5Q96G74 571 aa14.39□□□□□ -0.11
COL6A4P2-202ENST00000504443 ZBTB45Q96K62 511 aaPredicted RBP14.39□□□□□ -0.11
COL6A4P2-202ENST00000504443 STAU2Q9NUL3 570 aaKnown RBP eCLIP14.39□□□□□ -0.11
COL6A4P2-202ENST00000504443 PAK5Q9P286 719 aa14.39□□□□□ -0.11
COL6A4P2-202ENST00000504443 ANKMY1Q9P2S6 941 aa14.39□□□□□ -0.11
COL6A4P2-202ENST00000504443 ZNF219Q9P2Y4 722 aaPredicted RBP14.39□□□□□ -0.11
COL6A4P2-202ENST00000504443 ZDHHC2Q9UIJ5 367 aa14.39□□□□□ -0.11
COL6A4P2-202ENST00000504443 B3GNT3Q9Y2A9 372 aa14.39□□□□□ -0.11
COL6A4P2-202ENST00000504443 IFT52Q9Y366 437 aa14.39□□□□□ -0.11
COL6A4P2-202ENST00000504443 PCDHA11Q9Y5I1 949 aa14.39□□□□□ -0.11
COL6A4P2-202ENST00000504443 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP14.39□□□□□ -0.11
COL6A4P2-202ENST00000504443 MSI1O43347 362 aaKnown RBP14.39□□□□□ -0.11
COL6A4P2-202ENST00000504443 RSL1D1O76021 490 aaKnown RBP14.39□□□□□ -0.11
COL6A4P2-202ENST00000504443 CHRNB1P11230 501 aa14.39□□□□□ -0.11
COL6A4P2-202ENST00000504443 BMPR1AP36894 532 aa14.39□□□□□ -0.11
COL6A4P2-202ENST00000504443 NUMBP49757 651 aa14.39□□□□□ -0.11
COL6A4P2-202ENST00000504443 NME5P56597 212 aa14.39□□□□□ -0.11
COL6A4P2-202ENST00000504443 ORC1Q13415 861 aa14.39□□□□□ -0.11
COL6A4P2-202ENST00000504443 IQCF2Q8IXL9 164 aa14.39□□□□□ -0.11
COL6A4P2-202ENST00000504443 TNIP2Q8NFZ5 429 aa14.39□□□□□ -0.11
COL6A4P2-202ENST00000504443 ZFP90Q8TF47 636 aa14.39□□□□□ -0.11
COL6A4P2-202ENST00000504443 GMCL1Q96IK5 515 aa14.39□□□□□ -0.11
COL6A4P2-202ENST00000504443 RIT2Q99578 217 aa14.39□□□□□ -0.11
COL6A4P2-202ENST00000504443 PSD2Q9BQI7 771 aa14.39□□□□□ -0.11
COL6A4P2-202ENST00000504443 HAPLN2Q9GZV7 340 aa14.39□□□□□ -0.11
COL6A4P2-202ENST00000504443 CLDN25C9JDP6 229 aa14.38□□□□□ -0.11
COL6A4P2-202ENST00000504443 ENDOUP21128 410 aaKnown RBP14.38□□□□□ -0.11
COL6A4P2-202ENST00000504443 ELK4P28324 431 aa14.38□□□□□ -0.11
COL6A4P2-202ENST00000504443 SLC7A1P30825 629 aa14.38□□□□□ -0.11
COL6A4P2-202ENST00000504443 GLRA4Q5JXX5 417 aa14.38□□□□□ -0.11
COL6A4P2-202ENST00000504443 AGAP7PQ5VUJ5 663 aa14.38□□□□□ -0.11
COL6A4P2-202ENST00000504443 UBE2UQ5VVX9 321 aa14.38□□□□□ -0.11
COL6A4P2-202ENST00000504443 SEL1L3Q68CR1 1132 aa14.38□□□□□ -0.11
COL6A4P2-202ENST00000504443 APOBEC3HQ6NTF7 200 aaKnown RBP14.38□□□□□ -0.11
COL6A4P2-202ENST00000504443 SCARA5Q6ZMJ2 495 aa14.38□□□□□ -0.11
COL6A4P2-202ENST00000504443 RFPL4BQ6ZWI9 263 aa14.38□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms