RNA–Protein interactions for RNA: ENST00000504131.6

CLCN3-204, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 5 BASIC

Gene CLCN3, Length 5,592 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-204ENST00000504131 JMJD6Q6NYC1 403 aaPredicted RBP6.34□□□□□ -1.39
CLCN3-204ENST00000504131 C16orf54Q6UWD8 224 aa6.34□□□□□ -1.39
CLCN3-204ENST00000504131 TSPYL5Q86VY4 417 aaPredicted RBP6.34□□□□□ -1.39
CLCN3-204ENST00000504131 RALGPS2Q86X27 583 aaPredicted RBP6.34□□□□□ -1.39
CLCN3-204ENST00000504131 RFX6Q8HWS3 928 aa6.34□□□□□ -1.39
CLCN3-204ENST00000504131 ZNF654Q8IZM8 581 aa6.34□□□□□ -1.39
CLCN3-204ENST00000504131 MARVELD2Q8N4S9 558 aa6.34□□□□□ -1.39
CLCN3-204ENST00000504131 CPNE2Q96FN4 548 aaPredicted RBP6.34□□□□□ -1.39
CLCN3-204ENST00000504131 RBBP8Q99708 897 aa6.34□□□□□ -1.39
CLCN3-204ENST00000504131 EGFL8Q99944 293 aa6.34□□□□□ -1.39
CLCN3-204ENST00000504131 KANSL2Q9H9L4 492 aa6.34□□□□□ -1.39
CLCN3-204ENST00000504131 GNPTGQ9UJJ9 305 aa6.34□□□□□ -1.39
CLCN3-204ENST00000504131 REXO2Q9Y3B8 237 aaKnown RBP6.34□□□□□ -1.39
CLCN3-204ENST00000504131 PCDHB9Q9Y5E1 797 aa6.34□□□□□ -1.39
CLCN3-204ENST00000504131 A0A1W2PQ67 120 aa6.34□□□□□ -1.39
CLCN3-204ENST00000504131 B4E171 279 aa6.34□□□□□ -1.39
CLCN3-204ENST00000504131 SRGNP10124 158 aa6.34□□□□□ -1.39
CLCN3-204ENST00000504131 SLC7A1P30825 629 aa6.34□□□□□ -1.39
CLCN3-204ENST00000504131 HOXD13P35453 343 aa6.34□□□□□ -1.39
CLCN3-204ENST00000504131 OR1G1P47890 313 aa6.34□□□□□ -1.39
CLCN3-204ENST00000504131 TGM4P49221 684 aa6.34□□□□□ -1.39
CLCN3-204ENST00000504131 IL9RQ01113 521 aa6.34□□□□□ -1.39
CLCN3-204ENST00000504131 KCNJ8Q15842 424 aa6.34□□□□□ -1.39
CLCN3-204ENST00000504131 CUZD1Q86UP6 607 aa6.34□□□□□ -1.39
CLCN3-204ENST00000504131 MCATQ8IVS2 390 aaKnown RBP6.34□□□□□ -1.39
CLCN3-204ENST00000504131 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP6.34□□□□□ -1.39
CLCN3-204ENST00000504131 ARFGAP1Q8N6T3 406 aa6.34□□□□□ -1.39
CLCN3-204ENST00000504131 KBTBD3Q8NAB2 608 aa6.34□□□□□ -1.39
CLCN3-204ENST00000504131 PLPP7Q8NBV4 271 aa6.34□□□□□ -1.39
CLCN3-204ENST00000504131 DENND6BQ8NEG7 585 aa6.34□□□□□ -1.39
CLCN3-204ENST00000504131 FAR2Q96K12 515 aa6.34□□□□□ -1.39
CLCN3-204ENST00000504131 HEXIM2Q96MH2 286 aaKnown RBP6.34□□□□□ -1.39
CLCN3-204ENST00000504131 ZIM3Q96PE6 472 aa6.34□□□□□ -1.39
CLCN3-204ENST00000504131 C17orf62Q9BQA9 187 aa6.34□□□□□ -1.39
CLCN3-204ENST00000504131 IDI2Q9BXS1 227 aa6.34□□□□□ -1.39
CLCN3-204ENST00000504131 BEX2Q9BXY8 128 aa6.34□□□□□ -1.39
CLCN3-204ENST00000504131 SLC5A7Q9GZV3 580 aa6.34□□□□□ -1.39
CLCN3-204ENST00000504131 GHITMQ9H3K2 345 aa6.34□□□□□ -1.39
CLCN3-204ENST00000504131 DENND2DQ9H6A0 471 aaPredicted RBP6.34□□□□□ -1.39
CLCN3-204ENST00000504131 L2HGDHQ9H9P8 463 aa6.34□□□□□ -1.39
CLCN3-204ENST00000504131 SUGCTQ9HAC7 445 aa6.34□□□□□ -1.39
CLCN3-204ENST00000504131 ATF5Q9Y2D1 282 aaPredicted RBP6.34□□□□□ -1.39
CLCN3-204ENST00000504131 PCDHGA2Q9Y5H1 932 aa6.34□□□□□ -1.39
CLCN3-204ENST00000504131 RNF103-CHMP3A0A140T963 221 aa6.34□□□□□ -1.39
CLCN3-204ENST00000504131 IPO13O94829 963 aaKnown RBP6.34□□□□□ -1.39
CLCN3-204ENST00000504131 RBP1P09455 135 aa6.34□□□□□ -1.39
CLCN3-204ENST00000504131 SERPINF1P36955 418 aa6.34□□□□□ -1.39
CLCN3-204ENST00000504131 CD86P42081 329 aa6.34□□□□□ -1.39
CLCN3-204ENST00000504131 SRP54P61011 504 aaKnown RBP6.34□□□□□ -1.39
CLCN3-204ENST00000504131 DEFA5Q01523 94 aa6.34□□□□□ -1.39
CLCN3-204ENST00000504131 KCNC3Q14003 757 aa6.34□□□□□ -1.39
CLCN3-204ENST00000504131 HERC4Q5GLZ8 1057 aaPredicted RBP6.34□□□□□ -1.39
CLCN3-204ENST00000504131 FANCBQ8NB91 859 aa6.34□□□□□ -1.39
CLCN3-204ENST00000504131 OR5T3Q8NGG3 340 aa6.34□□□□□ -1.39
CLCN3-204ENST00000504131 SLC5A11Q8WWX8 675 aa6.34□□□□□ -1.39
CLCN3-204ENST00000504131 RILPQ96NA2 401 aa6.34□□□□□ -1.39
CLCN3-204ENST00000504131 TCF25Q9BQ70 676 aa6.34□□□□□ -1.39
CLCN3-204ENST00000504131 SYT15Q9BQS2 421 aa6.34□□□□□ -1.39
CLCN3-204ENST00000504131 TMED9Q9BVK6 235 aa6.34□□□□□ -1.39
CLCN3-204ENST00000504131 SLC6A17Q9H1V8 727 aa6.34□□□□□ -1.39
CLCN3-204ENST00000504131 RANBP3Q9H6Z4 567 aaPredicted RBP6.34□□□□□ -1.39
CLCN3-204ENST00000504131 ZNF334Q9HCZ1 680 aaPredicted RBP6.34□□□□□ -1.39
CLCN3-204ENST00000504131 INTS7Q9NVH2 962 aaKnown RBP6.34□□□□□ -1.39
CLCN3-204ENST00000504131 STK32BQ9NY57 414 aa6.34□□□□□ -1.39
CLCN3-204ENST00000504131 ZMIZ1Q9ULJ6 1067 aa6.34□□□□□ -1.39
CLCN3-204ENST00000504131 ACEP12821 1306 aa6.34□□□□□ -1.4
CLCN3-204ENST00000504131 IFT172Q9UG01 1749 aa6.34□□□□□ -1.4
CLCN3-204ENST00000504131 NT5C1B-RDH14C9J2C7 533 aa6.33□□□□□ -1.4
CLCN3-204ENST00000504131 NEDD8-MDP1E9PL57 170 aa6.33□□□□□ -1.4
CLCN3-204ENST00000504131 RRP8O43159 456 aaKnown RBP6.33□□□□□ -1.4
CLCN3-204ENST00000504131 USP1O94782 785 aa6.33□□□□□ -1.4
CLCN3-204ENST00000504131 CCNB2O95067 398 aa6.33□□□□□ -1.4
CLCN3-204ENST00000504131 MLYCDO95822 493 aa6.33□□□□□ -1.4
CLCN3-204ENST00000504131 C9P02748 559 aa6.33□□□□□ -1.4
CLCN3-204ENST00000504131 GLI1P08151 1106 aa6.33□□□□□ -1.4
CLCN3-204ENST00000504131 MAGP20916 626 aa6.33□□□□□ -1.4
CLCN3-204ENST00000504131 RXRBP28702 533 aa6.33□□□□□ -1.4
CLCN3-204ENST00000504131 RBL1P28749 1068 aa6.33□□□□□ -1.4
CLCN3-204ENST00000504131 PITPNBP48739 271 aa6.33□□□□□ -1.4
CLCN3-204ENST00000504131 ZNF135P52742 658 aaPredicted RBP6.33□□□□□ -1.4
CLCN3-204ENST00000504131 DRG2P55039 364 aaKnown RBP6.33□□□□□ -1.4
CLCN3-204ENST00000504131 CABP4P57796 275 aa6.33□□□□□ -1.4
CLCN3-204ENST00000504131 RAC1P63000 192 aa6.33□□□□□ -1.4
CLCN3-204ENST00000504131 TWF1Q12792 350 aa6.33□□□□□ -1.4
CLCN3-204ENST00000504131 GRB14Q14449 540 aa6.33□□□□□ -1.4
CLCN3-204ENST00000504131 CDONQ4KMG0 1287 aa6.33□□□□□ -1.4
CLCN3-204ENST00000504131 SLC27A3Q5K4L6 730 aa6.33□□□□□ -1.4
CLCN3-204ENST00000504131 C16orf71Q8IYS4 520 aaPredicted RBP6.33□□□□□ -1.4
CLCN3-204ENST00000504131 ANGPTL6Q8NI99 470 aa6.33□□□□□ -1.4
CLCN3-204ENST00000504131 FAM172AQ8WUF8 416 aa6.33□□□□□ -1.4
CLCN3-204ENST00000504131 TESCQ96BS2 214 aa6.33□□□□□ -1.4
CLCN3-204ENST00000504131 ZNF486Q96H40 463 aaPredicted RBP6.33□□□□□ -1.4
CLCN3-204ENST00000504131 TMEM68Q96MH6 324 aa6.33□□□□□ -1.4
CLCN3-204ENST00000504131 BTBD9Q96Q07 612 aa6.33□□□□□ -1.4
CLCN3-204ENST00000504131 TGS1Q96RS0 853 aaKnown RBP6.33□□□□□ -1.4
CLCN3-204ENST00000504131 CDRT15Q96T59 188 aa6.33□□□□□ -1.4
CLCN3-204ENST00000504131 CDC6Q99741 560 aa6.33□□□□□ -1.4
CLCN3-204ENST00000504131 NLNQ9BYT8 704 aa6.33□□□□□ -1.4
CLCN3-204ENST00000504131 CABP2Q9NPB3 220 aa6.33□□□□□ -1.4
CLCN3-204ENST00000504131 TNFRSF10DQ9UBN6 386 aa6.33□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms