RNA–Protein interactions for RNA: ENST00000502717.5

HMGXB3-201, Transcript of HMG-box containing 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene HMGXB3, Length 4,974 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-201ENST00000502717 CNTD1Q8N815 330 aa17.47■□□□□ 0.39
HMGXB3-201ENST00000502717 LENG8Q96PV6 779 aaPredicted RBP17.47■□□□□ 0.39
HMGXB3-201ENST00000502717 RMND5AQ9H871 391 aa17.47■□□□□ 0.39
HMGXB3-201ENST00000502717 CYP1A1P04798 512 aaPredicted RBP17.46■□□□□ 0.39
HMGXB3-201ENST00000502717 IL31Q6EBC2 164 aa17.46■□□□□ 0.39
HMGXB3-201ENST00000502717 FAM9CQ8IZT9 166 aa17.46■□□□□ 0.39
HMGXB3-201ENST00000502717 PIN4Q9Y237 131 aaKnown RBP17.46■□□□□ 0.39
HMGXB3-201ENST00000502717 ALOX12P18054 663 aa17.46■□□□□ 0.39
HMGXB3-201ENST00000502717 GNAZP19086 355 aa17.46■□□□□ 0.39
HMGXB3-201ENST00000502717 CHRM3P20309 590 aa17.46■□□□□ 0.39
HMGXB3-201ENST00000502717 PSMB4P28070 264 aa17.46■□□□□ 0.39
HMGXB3-201ENST00000502717 NADK2Q4G0N4 442 aa17.46■□□□□ 0.39
HMGXB3-201ENST00000502717 MTX3Q5HYI7 312 aa17.46■□□□□ 0.39
HMGXB3-201ENST00000502717 ZNF470Q6ECI4 717 aa17.46■□□□□ 0.39
HMGXB3-201ENST00000502717 RELL1Q8IUW5 271 aa17.46■□□□□ 0.39
HMGXB3-201ENST00000502717 PDPRQ8NCN5 879 aa17.46■□□□□ 0.39
HMGXB3-201ENST00000502717 OR52K1Q8NGK4 314 aa17.46■□□□□ 0.39
HMGXB3-201ENST00000502717 FIG4Q92562 907 aa17.46■□□□□ 0.39
HMGXB3-201ENST00000502717 COQ7Q99807 217 aa17.46■□□□□ 0.39
HMGXB3-201ENST00000502717 CIB1Q99828 191 aa17.46■□□□□ 0.39
HMGXB3-201ENST00000502717 SNRNP25Q9BV90 132 aaKnown RBP17.46■□□□□ 0.39
HMGXB3-201ENST00000502717 ST6GALNAC4Q9H4F1 302 aa17.46■□□□□ 0.39
HMGXB3-201ENST00000502717 TMEM134Q9H6X4 195 aa17.46■□□□□ 0.39
HMGXB3-201ENST00000502717 TRMT6Q9UJA5 497 aaKnown RBP17.46■□□□□ 0.39
HMGXB3-201ENST00000502717 SLC30A1Q9Y6M5 507 aa17.46■□□□□ 0.39
HMGXB3-201ENST00000502717 TAF4O00268 1085 aa17.46■□□□□ 0.39
HMGXB3-201ENST00000502717 PTAR1Q7Z6K3 402 aaPredicted RBP17.46■□□□□ 0.39
HMGXB3-201ENST00000502717 KBTBD2Q8IY47 623 aa17.46■□□□□ 0.39
HMGXB3-201ENST00000502717 ZNF276Q8N554 614 aa17.46■□□□□ 0.39
HMGXB3-201ENST00000502717 SEC24AO95486 1093 aa17.46■□□□□ 0.38
HMGXB3-201ENST00000502717 CRTAMO95727 393 aa17.46■□□□□ 0.38
HMGXB3-201ENST00000502717 TPSB2P20231 275 aa17.46■□□□□ 0.38
HMGXB3-201ENST00000502717 LAMTOR4Q0VGL1 99 aa17.46■□□□□ 0.38
HMGXB3-201ENST00000502717 TPSAB1Q15661 275 aa17.46■□□□□ 0.38
HMGXB3-201ENST00000502717 ASB7Q9H672 318 aa17.46■□□□□ 0.38
HMGXB3-201ENST00000502717 WDR55Q9H6Y2 383 aaPredicted RBP17.46■□□□□ 0.38
HMGXB3-201ENST00000502717 MYH10P35580 1976 aa17.45■□□□□ 0.38
HMGXB3-201ENST00000502717 VWA5AO00534 786 aa17.45■□□□□ 0.38
HMGXB3-201ENST00000502717 PMM2O15305 246 aa17.45■□□□□ 0.38
HMGXB3-201ENST00000502717 BNIP3LO60238 219 aa17.45■□□□□ 0.38
HMGXB3-201ENST00000502717 USP12O75317 370 aa17.45■□□□□ 0.38
HMGXB3-201ENST00000502717 FBXO21O94952 628 aa17.45■□□□□ 0.38
HMGXB3-201ENST00000502717 LBPP18428 481 aa17.45■□□□□ 0.38
HMGXB3-201ENST00000502717 MAP1SQ66K74 1059 aaPredicted RBP17.45■□□□□ 0.38
HMGXB3-201ENST00000502717 ATG16L2Q8NAA4 619 aa17.45■□□□□ 0.38
HMGXB3-201ENST00000502717 NPAS2Q99743 824 aa17.45■□□□□ 0.38
HMGXB3-201ENST00000502717 STMN3Q9NZ72 180 aa17.45■□□□□ 0.38
HMGXB3-201ENST00000502717 AFF4Q9UHB7 1163 aaKnown RBP17.45■□□□□ 0.38
HMGXB3-201ENST00000502717 COQ6Q9Y2Z9 468 aa17.45■□□□□ 0.38
HMGXB3-201ENST00000502717 FADS3Q9Y5Q0 445 aa17.45■□□□□ 0.38
HMGXB3-201ENST00000502717 ZNF197O14709 1029 aa17.45■□□□□ 0.38
HMGXB3-201ENST00000502717 H6PDO95479 791 aa17.45■□□□□ 0.38
HMGXB3-201ENST00000502717 MSH3P20585 1137 aa17.45■□□□□ 0.38
HMGXB3-201ENST00000502717 ABCG1P45844 678 aa17.45■□□□□ 0.38
HMGXB3-201ENST00000502717 IDH3AP50213 366 aa17.45■□□□□ 0.38
HMGXB3-201ENST00000502717 CPT1AP50416 773 aa17.45■□□□□ 0.38
HMGXB3-201ENST00000502717 PDSS2Q86YH6 399 aa17.45■□□□□ 0.38
HMGXB3-201ENST00000502717 VPS37AQ8NEZ2 397 aa17.45■□□□□ 0.38
HMGXB3-201ENST00000502717 FAM120BQ96EK7 910 aaKnown RBP17.45■□□□□ 0.38
HMGXB3-201ENST00000502717 TBC1D13Q9NVG8 400 aa17.45■□□□□ 0.38
HMGXB3-201ENST00000502717 LIMD1Q9UGP4 676 aa17.45■□□□□ 0.38
HMGXB3-201ENST00000502717 BCL9LQ86UU0 1499 aa17.45■□□□□ 0.38
HMGXB3-201ENST00000502717 LZTS3O60299 673 aaPredicted RBP17.45■□□□□ 0.38
HMGXB3-201ENST00000502717 PLIN3O60664 434 aa17.45■□□□□ 0.38
HMGXB3-201ENST00000502717 HIST1H2AGP0C0S8 130 aaPredicted RBP17.45■□□□□ 0.38
HMGXB3-201ENST00000502717 MLNP12872 115 aa17.45■□□□□ 0.38
HMGXB3-201ENST00000502717 HIST1H2ADP20671 130 aa17.45■□□□□ 0.38
HMGXB3-201ENST00000502717 POU5F1Q01860 360 aaKnown RBP17.45■□□□□ 0.38
HMGXB3-201ENST00000502717 MOGSQ13724 837 aa17.45■□□□□ 0.38
HMGXB3-201ENST00000502717 UGT3A1Q6NUS8 523 aa17.45■□□□□ 0.38
HMGXB3-201ENST00000502717 PCSK9Q8NBP7 692 aaKnown RBP17.45■□□□□ 0.38
HMGXB3-201ENST00000502717 HIST1H2AHQ96KK5 128 aa17.45■□□□□ 0.38
HMGXB3-201ENST00000502717 PANX3Q96QZ0 392 aa17.45■□□□□ 0.38
HMGXB3-201ENST00000502717 HIST1H2AJQ99878 128 aa17.45■□□□□ 0.38
HMGXB3-201ENST00000502717 H2AFJQ9BTM1 129 aa17.45■□□□□ 0.38
HMGXB3-201ENST00000502717 CXorf21Q9HAI6 301 aa17.45■□□□□ 0.38
HMGXB3-201ENST00000502717 CDHR5Q9HBB8 845 aa17.45■□□□□ 0.38
HMGXB3-201ENST00000502717 WDR37Q9Y2I8 494 aa17.45■□□□□ 0.38
HMGXB3-201ENST00000502717 GMEB1Q9Y692 573 aa17.45■□□□□ 0.38
HMGXB3-201ENST00000502717 VPS26AO75436 327 aa17.45■□□□□ 0.38
HMGXB3-201ENST00000502717 PCSK1P29120 753 aa17.45■□□□□ 0.38
HMGXB3-201ENST00000502717 ATP6V1E1P36543 226 aa17.45■□□□□ 0.38
HMGXB3-201ENST00000502717 UBE3AQ05086 875 aa17.45■□□□□ 0.38
HMGXB3-201ENST00000502717 DEPDC7Q96QD5 511 aa17.45■□□□□ 0.38
HMGXB3-201ENST00000502717 PORCNQ9H237 461 aa17.45■□□□□ 0.38
HMGXB3-201ENST00000502717 DOLKQ9UPQ8 538 aa17.45■□□□□ 0.38
HMGXB3-201ENST00000502717 TOPAZ1Q8N9V7 1692 aa17.44■□□□□ 0.38
HMGXB3-201ENST00000502717 RAD51BO15315 384 aa17.44■□□□□ 0.38
HMGXB3-201ENST00000502717 GRIK1P39086 918 aa17.44■□□□□ 0.38
HMGXB3-201ENST00000502717 MPP2Q14168 576 aa17.44■□□□□ 0.38
HMGXB3-201ENST00000502717 DDR2Q16832 855 aa17.44■□□□□ 0.38
HMGXB3-201ENST00000502717 SGO1Q5FBB7 561 aa17.44■□□□□ 0.38
HMGXB3-201ENST00000502717 TJP2Q9UDY2 1190 aa17.44■□□□□ 0.38
HMGXB3-201ENST00000502717 ASS1P00966 412 aaKnown RBP17.44■□□□□ 0.38
HMGXB3-201ENST00000502717 UNGP13051 313 aaPredicted RBP17.44■□□□□ 0.38
HMGXB3-201ENST00000502717 KLRC2P26717 231 aa17.44■□□□□ 0.38
HMGXB3-201ENST00000502717 DSG3P32926 999 aa17.44■□□□□ 0.38
HMGXB3-201ENST00000502717 CDK18Q07002 472 aa17.44■□□□□ 0.38
HMGXB3-201ENST00000502717 TCEAL1Q15170 157 aa17.44■□□□□ 0.38
HMGXB3-201ENST00000502717 GLB1LQ6UWU2 654 aa17.44■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms