RNA–Protein interactions for RNA: ENST00000502612.5

NEDD4-203, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 3

Gene NEDD4, Length 652 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-203ENST00000502612 GALNT3Q14435 633 aa6.78□□□□□ -1.32
NEDD4-203ENST00000502612 TSTQ16762 297 aaKnown RBP6.78□□□□□ -1.32
NEDD4-203ENST00000502612 ZNF667Q5HYK9 610 aa6.78□□□□□ -1.32
NEDD4-203ENST00000502612 MEX3CQ5U5Q3 659 aaKnown RBP6.78□□□□□ -1.32
NEDD4-203ENST00000502612 CHD1LQ86WJ1 897 aa6.78□□□□□ -1.32
NEDD4-203ENST00000502612 FAM47BQ8NA70 645 aa6.78□□□□□ -1.32
NEDD4-203ENST00000502612 WIPF2Q8TF74 440 aaPredicted RBP6.78□□□□□ -1.32
NEDD4-203ENST00000502612 RAB40AQ8WXH6 277 aa6.78□□□□□ -1.32
NEDD4-203ENST00000502612 CD180Q99467 661 aa6.78□□□□□ -1.32
NEDD4-203ENST00000502612 NPLQ9BXD5 320 aaPredicted RBP6.78□□□□□ -1.32
NEDD4-203ENST00000502612 QTRT1Q9BXR0 403 aaKnown RBP6.78□□□□□ -1.32
NEDD4-203ENST00000502612 EPHX3Q9H6B9 360 aa6.78□□□□□ -1.32
NEDD4-203ENST00000502612 NLKQ9UBE8 527 aa6.78□□□□□ -1.32
NEDD4-203ENST00000502612 ICKQ9UPZ9 632 aa6.78□□□□□ -1.32
NEDD4-203ENST00000502612 NAALADL1Q9UQQ1 740 aa6.78□□□□□ -1.32
NEDD4-203ENST00000502612 UGGT2Q9NYU1 1516 aa6.77□□□□□ -1.33
NEDD4-203ENST00000502612 HECW1Q76N89 1606 aa6.77□□□□□ -1.33
NEDD4-203ENST00000502612 UGDHO60701 494 aa6.77□□□□□ -1.33
NEDD4-203ENST00000502612 RBMXL2O75526 392 aaKnown RBP6.77□□□□□ -1.33
NEDD4-203ENST00000502612 CBX6O95503 412 aa6.77□□□□□ -1.33
NEDD4-203ENST00000502612 CDH15P55291 814 aa6.77□□□□□ -1.33
NEDD4-203ENST00000502612 NHLH1Q02575 133 aa6.77□□□□□ -1.33
NEDD4-203ENST00000502612 SLC10A2Q12908 348 aaPredicted RBP6.77□□□□□ -1.33
NEDD4-203ENST00000502612 SLC18A3Q16572 532 aa6.77□□□□□ -1.33
NEDD4-203ENST00000502612 PRICKLE4Q2TBC4 344 aa6.77□□□□□ -1.33
NEDD4-203ENST00000502612 ZNF766Q5HY98 468 aa6.77□□□□□ -1.33
NEDD4-203ENST00000502612 EARS2Q5JPH6 523 aaKnown RBP6.77□□□□□ -1.33
NEDD4-203ENST00000502612 GPATCH4Q5T3I0 446 aaKnown RBP6.77□□□□□ -1.33
NEDD4-203ENST00000502612 FAM171A1Q5VUB5 890 aa6.77□□□□□ -1.33
NEDD4-203ENST00000502612 FAAH2Q6GMR7 532 aa6.77□□□□□ -1.33
NEDD4-203ENST00000502612 NEK8Q86SG6 692 aa6.77□□□□□ -1.33
NEDD4-203ENST00000502612 CCDC25Q86WR0 208 aa6.77□□□□□ -1.33
NEDD4-203ENST00000502612 ADGRF4Q8IZF3 695 aa6.77□□□□□ -1.33
NEDD4-203ENST00000502612 PLD5Q8N7P1 536 aa6.77□□□□□ -1.33
NEDD4-203ENST00000502612 KCNG4Q8TDN1 519 aa6.77□□□□□ -1.33
NEDD4-203ENST00000502612 UCMAQ8WVF2 138 aa6.77□□□□□ -1.33
NEDD4-203ENST00000502612 CNOT9Q92600 299 aaKnown RBP6.77□□□□□ -1.33
NEDD4-203ENST00000502612 CXorf56Q9H5V9 222 aa6.77□□□□□ -1.33
NEDD4-203ENST00000502612 AAMDCQ9H7C9 122 aa6.77□□□□□ -1.33
NEDD4-203ENST00000502612 IRAK4Q9NWZ3 460 aa6.77□□□□□ -1.33
NEDD4-203ENST00000502612 SLC25A10Q9UBX3 287 aaPredicted RBP6.77□□□□□ -1.33
NEDD4-203ENST00000502612 UTS2RQ9UKP6 389 aa6.77□□□□□ -1.33
NEDD4-203ENST00000502612 COX11Q9Y6N1 276 aa6.77□□□□□ -1.33
NEDD4-203ENST00000502612 SNAPC4Q5SXM2 1469 aa6.77□□□□□ -1.33
NEDD4-203ENST00000502612 EHBP1L1Q8N3D4 1523 aa6.76□□□□□ -1.33
NEDD4-203ENST00000502612 SMIM35A0A1B0GVV1 85 aa6.76□□□□□ -1.33
NEDD4-203ENST00000502612 TP73O15350 636 aa6.76□□□□□ -1.33
NEDD4-203ENST00000502612 HBP1O60381 514 aa6.76□□□□□ -1.33
NEDD4-203ENST00000502612 NEURL1O76050 574 aa6.76□□□□□ -1.33
NEDD4-203ENST00000502612 RTN3O95197 1032 aaPredicted RBP6.76□□□□□ -1.33
NEDD4-203ENST00000502612 TUBB4AP04350 444 aa6.76□□□□□ -1.33
NEDD4-203ENST00000502612 KLRC2P26717 231 aa6.76□□□□□ -1.33
NEDD4-203ENST00000502612 CYP2J2P51589 502 aa6.76□□□□□ -1.33
NEDD4-203ENST00000502612 HMGA2P52926 109 aa6.76□□□□□ -1.33
NEDD4-203ENST00000502612 FOXF2Q12947 444 aa6.76□□□□□ -1.33
NEDD4-203ENST00000502612 MAPRE1Q15691 268 aaKnown RBP6.76□□□□□ -1.33
NEDD4-203ENST00000502612 SUPT20HL1Q3ZLR7 823 aa6.76□□□□□ -1.33
NEDD4-203ENST00000502612 LCE5AQ5TCM9 118 aa6.76□□□□□ -1.33
NEDD4-203ENST00000502612 PRIMA1Q86XR5 153 aa6.76□□□□□ -1.33
NEDD4-203ENST00000502612 GALNT16Q8N428 558 aa6.76□□□□□ -1.33
NEDD4-203ENST00000502612 ZHX3Q9H4I2 956 aa6.76□□□□□ -1.33
NEDD4-203ENST00000502612 AASSQ9UDR5 926 aa6.76□□□□□ -1.33
NEDD4-203ENST00000502612 IPO11Q9UI26 975 aaKnown RBP6.76□□□□□ -1.33
NEDD4-203ENST00000502612 SYNJ2O15056 1496 aa6.75□□□□□ -1.33
NEDD4-203ENST00000502612 GRIN2AQ12879 1464 aa6.75□□□□□ -1.33
NEDD4-203ENST00000502612 STRNO43815 780 aa6.75□□□□□ -1.33
NEDD4-203ENST00000502612 GUCY1B2O75343 617 aa6.75□□□□□ -1.33
NEDD4-203ENST00000502612 DDAH2O95865 285 aa6.75□□□□□ -1.33
NEDD4-203ENST00000502612 ADAP00813 363 aa6.75□□□□□ -1.33
NEDD4-203ENST00000502612 CAPN3P20807 821 aa6.75□□□□□ -1.33
NEDD4-203ENST00000502612 ATP5F1P24539 256 aaPredicted RBP6.75□□□□□ -1.33
NEDD4-203ENST00000502612 EPHB2P29323 1055 aa6.75□□□□□ -1.33
NEDD4-203ENST00000502612 PAFAH1B1P43034 410 aa6.75□□□□□ -1.33
NEDD4-203ENST00000502612 C5orf22Q49AR2 442 aa6.75□□□□□ -1.33
NEDD4-203ENST00000502612 PAPD7Q5XG87 772 aaKnown RBP6.75□□□□□ -1.33
NEDD4-203ENST00000502612 LRIG3Q6UXM1 1119 aa6.75□□□□□ -1.33
NEDD4-203ENST00000502612 R3HCC1LQ7Z5L2 792 aaKnown RBP6.75□□□□□ -1.33
NEDD4-203ENST00000502612 GHDCQ8N2G8 530 aa6.75□□□□□ -1.33
NEDD4-203ENST00000502612 ZNF366Q8N895 744 aa6.75□□□□□ -1.33
NEDD4-203ENST00000502612 RFFLQ8WZ73 363 aa6.75□□□□□ -1.33
NEDD4-203ENST00000502612 ZG16BQ96DA0 208 aa6.75□□□□□ -1.33
NEDD4-203ENST00000502612 XRN2Q9H0D6 950 aaKnown RBP eCLIP6.75□□□□□ -1.33
NEDD4-203ENST00000502612 BEX4Q9NWD9 120 aaPredicted RBP6.75□□□□□ -1.33
NEDD4-203ENST00000502612 SETD5Q9C0A6 1442 aa6.75□□□□□ -1.33
NEDD4-203ENST00000502612 EIF4G3O43432 1585 aaKnown RBP6.74□□□□□ -1.33
NEDD4-203ENST00000502612 OR6C68A6NDL8 312 aa6.74□□□□□ -1.33
NEDD4-203ENST00000502612 IFNL4K9M1U5 179 aa6.74□□□□□ -1.33
NEDD4-203ENST00000502612 RHODO00212 210 aa6.74□□□□□ -1.33
NEDD4-203ENST00000502612 PPP6CO00743 305 aa6.74□□□□□ -1.33
NEDD4-203ENST00000502612 ADAM10O14672 748 aa6.74□□□□□ -1.33
NEDD4-203ENST00000502612 CEP104O60308 925 aa6.74□□□□□ -1.33
NEDD4-203ENST00000502612 CHRM4P08173 479 aa6.74□□□□□ -1.33
NEDD4-203ENST00000502612 STAT1P42224 750 aa6.74□□□□□ -1.33
NEDD4-203ENST00000502612 GPD2P43304 727 aa6.74□□□□□ -1.33
NEDD4-203ENST00000502612 CPA2P48052 419 aa6.74□□□□□ -1.33
NEDD4-203ENST00000502612 RXRGP48443 463 aa6.74□□□□□ -1.33
NEDD4-203ENST00000502612 HARS2P49590 506 aaKnown RBP6.74□□□□□ -1.33
NEDD4-203ENST00000502612 SLC12A2P55011 1212 aa6.74□□□□□ -1.33
NEDD4-203ENST00000502612 HSF1Q00613 529 aa6.74□□□□□ -1.33
NEDD4-203ENST00000502612 STIM1Q13586 685 aa6.74□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms