RNA–Protein interactions for RNA: ENST00000502557.5

CCHCR1-216, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 3

Gene CCHCR1, Length 662 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-216ENST00000502557 ARHGAP42A6NI28 874 aa18.2■□□□□ 0.5
CCHCR1-216ENST00000502557 PTMAP06454 111 aaKnown RBP18.2■□□□□ 0.5
CCHCR1-216ENST00000502557 MARCKSL1P49006 195 aa18.2■□□□□ 0.5
CCHCR1-216ENST00000502557 SERPINH1P50454 418 aaKnown RBP18.2■□□□□ 0.5
CCHCR1-216ENST00000502557 PAPOLAP51003 745 aaKnown RBP18.2■□□□□ 0.5
CCHCR1-216ENST00000502557 CLCN6P51797 869 aa18.2■□□□□ 0.5
CCHCR1-216ENST00000502557 TMPRSS6Q8IU80 811 aa18.2■□□□□ 0.5
CCHCR1-216ENST00000502557 PQLC3Q8N755 202 aa18.2■□□□□ 0.5
CCHCR1-216ENST00000502557 KIAA1524Q8TCG1 905 aa18.2■□□□□ 0.5
CCHCR1-216ENST00000502557 KRT35Q92764 455 aa18.2■□□□□ 0.5
CCHCR1-216ENST00000502557 RNF25Q96BH1 459 aaPredicted RBP18.2■□□□□ 0.5
CCHCR1-216ENST00000502557 KCNF1Q9H3M0 494 aa18.2■□□□□ 0.5
CCHCR1-216ENST00000502557 FBRSQ9HAH7 460 aa18.2■□□□□ 0.5
CCHCR1-216ENST00000502557 PRDM16Q9HAZ2 1276 aa18.2■□□□□ 0.5
CCHCR1-216ENST00000502557 ZSCAN5CA6NGD5 496 aaPredicted RBP18.19■□□□□ 0.5
CCHCR1-216ENST00000502557 ZNF487B1APH4 448 aa18.19■□□□□ 0.5
CCHCR1-216ENST00000502557 DFFAO00273 331 aa18.19■□□□□ 0.5
CCHCR1-216ENST00000502557 HRO43593 1189 aa18.19■□□□□ 0.5
CCHCR1-216ENST00000502557 KRT86O43790 486 aa18.19■□□□□ 0.5
CCHCR1-216ENST00000502557 PALMO75781 387 aa18.19■□□□□ 0.5
CCHCR1-216ENST00000502557 C7P10643 843 aa18.19■□□□□ 0.5
CCHCR1-216ENST00000502557 GEMIN4P57678 1058 aaKnown RBP18.19■□□□□ 0.5
CCHCR1-216ENST00000502557 SRSF5Q13243 272 aaKnown RBP18.19■□□□□ 0.5
CCHCR1-216ENST00000502557 NCBP2-AS2Q69YL0 99 aa18.19■□□□□ 0.5
CCHCR1-216ENST00000502557 C22orf39Q6P5X5 142 aa18.19■□□□□ 0.5
CCHCR1-216ENST00000502557 ZC3H14Q6PJT7 736 aaKnown RBP18.19■□□□□ 0.5
CCHCR1-216ENST00000502557 KIAA1324Q6UXG2 1013 aaKnown RBP18.19■□□□□ 0.5
CCHCR1-216ENST00000502557 Q6ZVU0 165 aa18.19■□□□□ 0.5
CCHCR1-216ENST00000502557 VSIG1Q86XK7 387 aa18.19■□□□□ 0.5
CCHCR1-216ENST00000502557 KATNAL2Q8IYT4 538 aa18.19■□□□□ 0.5
CCHCR1-216ENST00000502557 STK40Q8N2I9 435 aa18.19■□□□□ 0.5
CCHCR1-216ENST00000502557 RNF10Q8N5U6 811 aaKnown RBP18.19■□□□□ 0.5
CCHCR1-216ENST00000502557 ZNF830Q96NB3 372 aaPredicted RBP18.19■□□□□ 0.5
CCHCR1-216ENST00000502557 RNF157Q96PX1 679 aa18.19■□□□□ 0.5
CCHCR1-216ENST00000502557 FAM129BQ96TA1 746 aa18.19■□□□□ 0.5
CCHCR1-216ENST00000502557 RSPH9Q9H1X1 276 aaPredicted RBP18.19■□□□□ 0.5
CCHCR1-216ENST00000502557 GUCA1BQ9UMX6 200 aa18.19■□□□□ 0.5
CCHCR1-216ENST00000502557 FCF1Q9Y324 198 aaKnown RBP18.19■□□□□ 0.5
CCHCR1-216ENST00000502557 CAPN6Q9Y6Q1 641 aa18.19■□□□□ 0.5
CCHCR1-216ENST00000502557 J3KR12 359 aa18.18■□□□□ 0.5
CCHCR1-216ENST00000502557 PRAMEF11O60813 436 aa18.18■□□□□ 0.5
CCHCR1-216ENST00000502557 ZNF821O75541 412 aaPredicted RBP18.18■□□□□ 0.5
CCHCR1-216ENST00000502557 CTNNA1P35221 906 aaKnown RBP18.18■□□□□ 0.5
CCHCR1-216ENST00000502557 SERPINB6P35237 376 aa18.18■□□□□ 0.5
CCHCR1-216ENST00000502557 NBL1P41271 181 aa18.18■□□□□ 0.5
CCHCR1-216ENST00000502557 RPS14P62263 151 aaKnown RBP18.18■□□□□ 0.5
CCHCR1-216ENST00000502557 PAFAH1B3Q15102 231 aaKnown RBP18.18■□□□□ 0.5
CCHCR1-216ENST00000502557 MFSD7Q6UXD7 560 aa18.18■□□□□ 0.5
CCHCR1-216ENST00000502557 ARHGAP36Q6ZRI8 547 aa18.18■□□□□ 0.5
CCHCR1-216ENST00000502557 ZNF662Q6ZS27 426 aa18.18■□□□□ 0.5
CCHCR1-216ENST00000502557 NT5DC3Q86UY8 548 aa18.18■□□□□ 0.5
CCHCR1-216ENST00000502557 CACUL1Q86Y37 369 aa18.18■□□□□ 0.5
CCHCR1-216ENST00000502557 SYCE1Q8N0S2 351 aa18.18■□□□□ 0.5
CCHCR1-216ENST00000502557 RLN3Q8WXF3 142 aa18.18■□□□□ 0.5
CCHCR1-216ENST00000502557 PRCCQ92733 491 aaPredicted RBP18.18■□□□□ 0.5
CCHCR1-216ENST00000502557 SIPA1Q96FS4 1042 aa18.18■□□□□ 0.5
CCHCR1-216ENST00000502557 CEP44Q9C0F1 390 aa18.18■□□□□ 0.5
CCHCR1-216ENST00000502557 PDFQ9HBH1 243 aa18.18■□□□□ 0.5
CCHCR1-216ENST00000502557 INVSQ9Y283 1065 aa18.18■□□□□ 0.5
CCHCR1-216ENST00000502557 PPP2R2CQ9Y2T4 447 aa18.18■□□□□ 0.5
CCHCR1-216ENST00000502557 MFSD11O43934 449 aa18.17■□□□□ 0.5
CCHCR1-216ENST00000502557 CTNNA2P26232 953 aa18.17■□□□□ 0.5
CCHCR1-216ENST00000502557 CNR2P34972 360 aa18.17■□□□□ 0.5
CCHCR1-216ENST00000502557 NHLH1Q02575 133 aa18.17■□□□□ 0.5
CCHCR1-216ENST00000502557 TAZQ16635 292 aa18.17■□□□□ 0.5
CCHCR1-216ENST00000502557 MAP7D1Q3KQU3 841 aa18.17■□□□□ 0.5
CCHCR1-216ENST00000502557 USP39Q53GS9 565 aaKnown RBP18.17■□□□□ 0.5
CCHCR1-216ENST00000502557 ODF2Q5BJF6 829 aa18.17■□□□□ 0.5
CCHCR1-216ENST00000502557 ZNF776Q68DI1 518 aaPredicted RBP18.17■□□□□ 0.5
CCHCR1-216ENST00000502557 METTL3Q86U44 580 aaKnown RBP18.17■□□□□ 0.5
CCHCR1-216ENST00000502557 PCDH20Q8N6Y1 951 aaKnown RBP18.17■□□□□ 0.5
CCHCR1-216ENST00000502557 OR2A12Q8NGT7 310 aa18.17■□□□□ 0.5
CCHCR1-216ENST00000502557 GAB3Q8WWW8 586 aa18.17■□□□□ 0.5
CCHCR1-216ENST00000502557 TNKS2Q9H2K2 1166 aa18.17■□□□□ 0.5
CCHCR1-216ENST00000502557 LZTFL1Q9NQ48 299 aa18.17■□□□□ 0.5
CCHCR1-216ENST00000502557 IPO11Q9UI26 975 aaKnown RBP18.17■□□□□ 0.5
CCHCR1-216ENST00000502557 SBDSQ9Y3A5 250 aaKnown RBP eCLIP18.17■□□□□ 0.5
CCHCR1-216ENST00000502557 PCDHA3Q9Y5H8 950 aa18.17■□□□□ 0.5
CCHCR1-216ENST00000502557 BNIP3LO60238 219 aa18.16■□□□□ 0.5
CCHCR1-216ENST00000502557 RPP40O75818 363 aaKnown RBP18.16■□□□□ 0.5
CCHCR1-216ENST00000502557 TMCC1O94876 653 aa18.16■□□□□ 0.5
CCHCR1-216ENST00000502557 ZRANB2O95218 330 aaKnown RBP eCLIP18.16■□□□□ 0.5
CCHCR1-216ENST00000502557 FTCDO95954 541 aa18.16■□□□□ 0.5
CCHCR1-216ENST00000502557 P2RY2P41231 377 aa18.16■□□□□ 0.5
CCHCR1-216ENST00000502557 CDKN2BP42772 138 aa18.16■□□□□ 0.5
CCHCR1-216ENST00000502557 ELAVL3Q14576 367 aaKnown RBP18.16■□□□□ 0.5
CCHCR1-216ENST00000502557 INO80DQ53TQ3 878 aaPredicted RBP18.16■□□□□ 0.5
CCHCR1-216ENST00000502557 SLC9A4Q6AI14 798 aa18.16■□□□□ 0.5
CCHCR1-216ENST00000502557 SPOCD1Q6ZMY3 1216 aa18.16■□□□□ 0.5
CCHCR1-216ENST00000502557 PEX26Q7Z412 305 aa18.16■□□□□ 0.5
CCHCR1-216ENST00000502557 RCOR2Q8IZ40 523 aa18.16■□□□□ 0.5
CCHCR1-216ENST00000502557 PLD5Q8N7P1 536 aa18.16■□□□□ 0.5
CCHCR1-216ENST00000502557 EXD1Q8NHP7 514 aa18.16■□□□□ 0.5
CCHCR1-216ENST00000502557 CASKIN2Q8WXE0 1202 aa18.16■□□□□ 0.5
CCHCR1-216ENST00000502557 OR8D1Q8WZ84 308 aa18.16■□□□□ 0.5
CCHCR1-216ENST00000502557 ISG20Q96AZ6 181 aaKnown RBP18.16■□□□□ 0.5
CCHCR1-216ENST00000502557 CD93Q9NPY3 652 aa18.16■□□□□ 0.5
CCHCR1-216ENST00000502557 USP36Q9P275 1121 aaKnown RBP18.16■□□□□ 0.5
CCHCR1-216ENST00000502557 UBA2Q9UBT2 640 aaPredicted RBP18.16■□□□□ 0.5
CCHCR1-216ENST00000502557 AMFRQ9UKV5 643 aa18.16■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms