RNA–Protein interactions for RNA: ENST00000498658.5

FXR1-222, Transcript of FMR1 autosomal homolog 1, human

TSL 2

Gene FXR1, Length 683 nt, Biotype retained intron, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FXR1-222	ENST00000498658	MID1	O15344	667 aa		10.75	□□□□□ -0.69
FXR1-222	ENST00000498658	SLC7A4	O43246	635 aa		10.75	□□□□□ -0.69
FXR1-222	ENST00000498658	CREB3	O43889	395 aa		10.75	□□□□□ -0.69
FXR1-222	ENST00000498658	RNASEH2A	O75792	299 aa	Known RBP	10.75	□□□□□ -0.69
FXR1-222	ENST00000498658	SEMA4F	O95754	770 aa		10.75	□□□□□ -0.69
FXR1-222	ENST00000498658	SYP	P08247	313 aa		10.75	□□□□□ -0.69
FXR1-222	ENST00000498658	SERPINF2	P08697	491 aa		10.75	□□□□□ -0.69
FXR1-222	ENST00000498658	FAM228B	P0C875	321 aa		10.75	□□□□□ -0.69
FXR1-222	ENST00000498658	SRC	P12931	536 aa		10.75	□□□□□ -0.69
FXR1-222	ENST00000498658	GOT1	P17174	413 aa		10.75	□□□□□ -0.69
FXR1-222	ENST00000498658	SERPINH1	P50454	418 aa	Known RBP	10.75	□□□□□ -0.69
FXR1-222	ENST00000498658	ATXN3	P54252	364 aa	Predicted RBP	10.75	□□□□□ -0.69
FXR1-222	ENST00000498658	TPI1	P60174	286 aa		10.75	□□□□□ -0.69
FXR1-222	ENST00000498658	FOXK2	Q01167	660 aa		10.75	□□□□□ -0.69
FXR1-222	ENST00000498658	OGDH	Q02218	1023 aa		10.75	□□□□□ -0.69
FXR1-222	ENST00000498658	GFPT1	Q06210	699 aa	Predicted RBP	10.75	□□□□□ -0.69
FXR1-222	ENST00000498658	CCDC6	Q16204	474 aa		10.75	□□□□□ -0.69
FXR1-222	ENST00000498658	SLC18A3	Q16572	532 aa		10.75	□□□□□ -0.69
FXR1-222	ENST00000498658	PARP15	Q460N3	678 aa		10.75	□□□□□ -0.69
FXR1-222	ENST00000498658	RAB6C	Q53S08	254 aa		10.75	□□□□□ -0.69
FXR1-222	ENST00000498658	ARTN	Q5T4W7	220 aa		10.75	□□□□□ -0.69
FXR1-222	ENST00000498658	FAM72A	Q5TYM5	149 aa		10.75	□□□□□ -0.69
FXR1-222	ENST00000498658	DCAF12L1	Q5VU92	463 aa		10.75	□□□□□ -0.69
FXR1-222	ENST00000498658	FAM72D	Q6L9T8	149 aa		10.75	□□□□□ -0.69
FXR1-222	ENST00000498658	FAM124A	Q86V42	546 aa		10.75	□□□□□ -0.69
FXR1-222	ENST00000498658	FAM72B	Q86X60	149 aa		10.75	□□□□□ -0.69
FXR1-222	ENST00000498658	SLC41A1	Q8IVJ1	513 aa		10.75	□□□□□ -0.69
FXR1-222	ENST00000498658	PLPP6	Q8IY26	295 aa		10.75	□□□□□ -0.69
FXR1-222	ENST00000498658	STK40	Q8N2I9	435 aa		10.75	□□□□□ -0.69
FXR1-222	ENST00000498658	DEFB119	Q8N690	84 aa		10.75	□□□□□ -0.69
FXR1-222	ENST00000498658	RTL3	Q8N8U3	475 aa	Known RBP	10.75	□□□□□ -0.69
FXR1-222	ENST00000498658	CASKIN2	Q8WXE0	1202 aa		10.75	□□□□□ -0.69
FXR1-222	ENST00000498658	ARHGEF2	Q92974	986 aa	Known RBP	10.75	□□□□□ -0.69
FXR1-222	ENST00000498658	ISG20	Q96AZ6	181 aa	Known RBP	10.75	□□□□□ -0.69
FXR1-222	ENST00000498658	FAM129B	Q96TA1	746 aa		10.75	□□□□□ -0.69
FXR1-222	ENST00000498658	EDEM2	Q9BV94	578 aa		10.75	□□□□□ -0.69
FXR1-222	ENST00000498658	TRIM5	Q9C035	493 aa		10.75	□□□□□ -0.69
FXR1-222	ENST00000498658	ZDHHC5	Q9C0B5	715 aa		10.75	□□□□□ -0.69
FXR1-222	ENST00000498658	RAB6C	Q9H0N0	254 aa		10.75	□□□□□ -0.69
FXR1-222	ENST00000498658	KDM4C	Q9H3R0	1056 aa		10.75	□□□□□ -0.69
FXR1-222	ENST00000498658	CD93	Q9NPY3	652 aa		10.75	□□□□□ -0.69
FXR1-222	ENST00000498658	TMEM9B	Q9NQ34	198 aa		10.75	□□□□□ -0.69
FXR1-222	ENST00000498658	ABHD10	Q9NUJ1	306 aa		10.75	□□□□□ -0.69
FXR1-222	ENST00000498658	TMEM74B	Q9NUR3	256 aa		10.75	□□□□□ -0.69
FXR1-222	ENST00000498658	ARHGAP20	Q9P2F6	1191 aa		10.75	□□□□□ -0.69
FXR1-222	ENST00000498658	IP6K2	Q9UHH9	426 aa		10.75	□□□□□ -0.69
FXR1-222	ENST00000498658	DNAI1	Q9UI46	699 aa		10.75	□□□□□ -0.69
FXR1-222	ENST00000498658	PPM1H	Q9ULR3	514 aa		10.75	□□□□□ -0.69
FXR1-222	ENST00000498658	AP4E1	Q9UPM8	1137 aa		10.75	□□□□□ -0.69
FXR1-222	ENST00000498658	CEP250	Q9BV73	2442 aa		10.75	□□□□□ -0.69
FXR1-222	ENST00000498658	TNRC6B	Q9UPQ9	1833 aa	Known RBP	10.74	□□□□□ -0.69
FXR1-222	ENST00000498658		A0A1B0GTW7	788 aa		10.74	□□□□□ -0.69
FXR1-222	ENST00000498658		A0A1W2PP55	124 aa		10.74	□□□□□ -0.69
FXR1-222	ENST00000498658	LNP1	A1A4G5	178 aa		10.74	□□□□□ -0.69
FXR1-222	ENST00000498658	MYO1F	O00160	1098 aa		10.74	□□□□□ -0.69
FXR1-222	ENST00000498658	DAPK3	O43293	454 aa		10.74	□□□□□ -0.69
FXR1-222	ENST00000498658	AKR1B10	O60218	316 aa		10.74	□□□□□ -0.69
FXR1-222	ENST00000498658	SNAP91	O60641	907 aa		10.74	□□□□□ -0.69
FXR1-222	ENST00000498658	PRNP	P04156	253 aa		10.74	□□□□□ -0.69
FXR1-222	ENST00000498658	CFI	P05156	583 aa		10.74	□□□□□ -0.69
FXR1-222	ENST00000498658	H2AFZ	P0C0S5	128 aa		10.74	□□□□□ -0.69
FXR1-222	ENST00000498658	MIP	P30301	263 aa		10.74	□□□□□ -0.69
FXR1-222	ENST00000498658	ACSL1	P33121	698 aa		10.74	□□□□□ -0.69
FXR1-222	ENST00000498658	EIF4A3	P38919	411 aa	Known RBP	10.74	□□□□□ -0.69
FXR1-222	ENST00000498658	PSMD8	P48556	350 aa		10.74	□□□□□ -0.69
FXR1-222	ENST00000498658	IRX4	P78413	519 aa		10.74	□□□□□ -0.69
FXR1-222	ENST00000498658	SEMA3B	Q13214	749 aa		10.74	□□□□□ -0.69
FXR1-222	ENST00000498658	BOLA3	Q53S33	107 aa		10.74	□□□□□ -0.69
FXR1-222	ENST00000498658	STPG1	Q5TH74	334 aa		10.74	□□□□□ -0.69
FXR1-222	ENST00000498658	DAB2IP	Q5VWQ8	1189 aa		10.74	□□□□□ -0.69
FXR1-222	ENST00000498658	C22orf39	Q6P5X5	142 aa		10.74	□□□□□ -0.69
FXR1-222	ENST00000498658		Q6ZVU0	165 aa		10.74	□□□□□ -0.69
FXR1-222	ENST00000498658	H2AFV	Q71UI9	128 aa		10.74	□□□□□ -0.69
FXR1-222	ENST00000498658	DGLUCY	Q7Z3D6	616 aa		10.74	□□□□□ -0.69
FXR1-222	ENST00000498658	UMODL1-AS1	Q8N2C9	162 aa		10.74	□□□□□ -0.69
FXR1-222	ENST00000498658	HDDC3	Q8N4P3	179 aa		10.74	□□□□□ -0.69
FXR1-222	ENST00000498658	PCDH20	Q8N6Y1	951 aa	Known RBP	10.74	□□□□□ -0.69
FXR1-222	ENST00000498658	NIPA2	Q8N8Q9	360 aa		10.74	□□□□□ -0.69
FXR1-222	ENST00000498658	TMIE	Q8NEW7	156 aa		10.74	□□□□□ -0.69
FXR1-222	ENST00000498658	OR7D4	Q8NG98	312 aa		10.74	□□□□□ -0.69
FXR1-222	ENST00000498658	OR2T34	Q8NGX1	318 aa		10.74	□□□□□ -0.69
FXR1-222	ENST00000498658	CTNNBL1	Q8WYA6	563 aa	Predicted RBP	10.74	□□□□□ -0.69
FXR1-222	ENST00000498658	PPP1R16A	Q96I34	528 aa		10.74	□□□□□ -0.69
FXR1-222	ENST00000498658	CCDC42	Q96M95	316 aa		10.74	□□□□□ -0.69
FXR1-222	ENST00000498658	ANP32E	Q9BTT0	268 aa		10.74	□□□□□ -0.69
FXR1-222	ENST00000498658	NUP85	Q9BW27	656 aa		10.74	□□□□□ -0.69
FXR1-222	ENST00000498658	THAP2	Q9H0W7	228 aa		10.74	□□□□□ -0.69
FXR1-222	ENST00000498658	SMOC1	Q9H4F8	434 aa		10.74	□□□□□ -0.69
FXR1-222	ENST00000498658	MTG2	Q9H4K7	406 aa		10.74	□□□□□ -0.69
FXR1-222	ENST00000498658	DHX35	Q9H5Z1	703 aa	Known RBP	10.74	□□□□□ -0.69
FXR1-222	ENST00000498658	OSGEP	Q9NPF4	335 aa		10.74	□□□□□ -0.69
FXR1-222	ENST00000498658	DYRK4	Q9NR20	520 aa		10.74	□□□□□ -0.69
FXR1-222	ENST00000498658	NEU3	Q9UQ49	428 aa		10.74	□□□□□ -0.69
FXR1-222	ENST00000498658	GON4L	Q3T8J9	2241 aa		10.74	□□□□□ -0.69
FXR1-222	ENST00000498658	PI4KA	P42356	2102 aa		10.73	□□□□□ -0.69
FXR1-222	ENST00000498658	DCHS1	Q96JQ0	3298 aa		10.73	□□□□□ -0.69
FXR1-222	ENST00000498658	AKR1B15	C9JRZ8	316 aa	Predicted RBP	10.73	□□□□□ -0.69
FXR1-222	ENST00000498658	EEF2K	O00418	725 aa	Known RBP	10.73	□□□□□ -0.69
FXR1-222	ENST00000498658	BCAT2	O15382	392 aa	Predicted RBP	10.73	□□□□□ -0.69
FXR1-222	ENST00000498658	KDELR3	O43731	214 aa		10.73	□□□□□ -0.69

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