RNA–Protein interactions for RNA: ENST00000498534.5

CNOT4-211, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

TSL 2

Gene CNOT4, Length 481 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-211ENST00000498534 HS3ST2Q9Y278 367 aa12.34□□□□□ -0.43
CNOT4-211ENST00000498534 TP53BP1Q12888 1972 aaPredicted RBP12.34□□□□□ -0.43
CNOT4-211ENST00000498534 GTPBP10A4D1E9 387 aaKnown RBP12.33□□□□□ -0.44
CNOT4-211ENST00000498534 KPNA3O00505 521 aaPredicted RBP12.33□□□□□ -0.44
CNOT4-211ENST00000498534 SLC31A1O15431 190 aa12.33□□□□□ -0.44
CNOT4-211ENST00000498534 DAB1O75553 588 aa12.33□□□□□ -0.44
CNOT4-211ENST00000498534 PRNPP04156 253 aa12.33□□□□□ -0.44
CNOT4-211ENST00000498534 RHOCP08134 193 aa12.33□□□□□ -0.44
CNOT4-211ENST00000498534 GLDCP23378 1020 aa12.33□□□□□ -0.44
CNOT4-211ENST00000498534 PON1P27169 355 aa12.33□□□□□ -0.44
CNOT4-211ENST00000498534 CHRNA3P32297 505 aa12.33□□□□□ -0.44
CNOT4-211ENST00000498534 RECQLP46063 649 aaPredicted RBP12.33□□□□□ -0.44
CNOT4-211ENST00000498534 MTIF2P46199 727 aaKnown RBP12.33□□□□□ -0.44
CNOT4-211ENST00000498534 CLDN6P56747 220 aa12.33□□□□□ -0.44
CNOT4-211ENST00000498534 ZNF211Q13398 564 aaPredicted RBP12.33□□□□□ -0.44
CNOT4-211ENST00000498534 TPD52L1Q16890 204 aaPredicted RBP12.33□□□□□ -0.44
CNOT4-211ENST00000498534 C5orf22Q49AR2 442 aa12.33□□□□□ -0.44
CNOT4-211ENST00000498534 BRMS1LQ5PSV4 323 aa12.33□□□□□ -0.44
CNOT4-211ENST00000498534 OLFML1Q6UWY5 402 aa12.33□□□□□ -0.44
CNOT4-211ENST00000498534 SLC26A9Q7LBE3 791 aa12.33□□□□□ -0.44
CNOT4-211ENST00000498534 KANSL1Q7Z3B3 1105 aa12.33□□□□□ -0.44
CNOT4-211ENST00000498534 C14orf80Q86SX3 495 aa12.33□□□□□ -0.44
CNOT4-211ENST00000498534 C1orf131Q8NDD1 294 aaKnown RBP12.33□□□□□ -0.44
CNOT4-211ENST00000498534 TMIEQ8NEW7 156 aa12.33□□□□□ -0.44
CNOT4-211ENST00000498534 ZNF397Q8NF99 534 aaPredicted RBP12.33□□□□□ -0.44
CNOT4-211ENST00000498534 OR52K2Q8NGK3 314 aa12.33□□□□□ -0.44
CNOT4-211ENST00000498534 TKTL2Q9H0I9 626 aa12.33□□□□□ -0.44
CNOT4-211ENST00000498534 KLHL11Q9NVR0 708 aa12.33□□□□□ -0.44
CNOT4-211ENST00000498534 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP12.33□□□□□ -0.44
CNOT4-211ENST00000498534 STAP1Q9ULZ2 295 aa12.33□□□□□ -0.44
CNOT4-211ENST00000498534 CLCA2Q9UQC9 943 aa12.33□□□□□ -0.44
CNOT4-211ENST00000498534 ARID1BQ8NFD5 2236 aaPredicted RBP12.33□□□□□ -0.44
CNOT4-211ENST00000498534 A0A1W2PQU0 124 aa12.32□□□□□ -0.44
CNOT4-211ENST00000498534 FOXN3O00409 490 aaPredicted RBP12.32□□□□□ -0.44
CNOT4-211ENST00000498534 SIGLEC6O43699 453 aa12.32□□□□□ -0.44
CNOT4-211ENST00000498534 SDC3O75056 442 aa12.32□□□□□ -0.44
CNOT4-211ENST00000498534 GADD45BO75293 160 aaPredicted RBP12.32□□□□□ -0.44
CNOT4-211ENST00000498534 PCDH8O95206 1070 aa12.32□□□□□ -0.44
CNOT4-211ENST00000498534 MT-CO1P00395 513 aa12.32□□□□□ -0.44
CNOT4-211ENST00000498534 ERBB2P04626 1255 aa12.32□□□□□ -0.44
CNOT4-211ENST00000498534 THEGLP0DJG4 465 aa12.32□□□□□ -0.44
CNOT4-211ENST00000498534 SRCP12931 536 aa12.32□□□□□ -0.44
CNOT4-211ENST00000498534 ACP1P24666 158 aa12.32□□□□□ -0.44
CNOT4-211ENST00000498534 AKT2P31751 481 aa12.32□□□□□ -0.44
CNOT4-211ENST00000498534 ACTN2P35609 894 aa12.32□□□□□ -0.44
CNOT4-211ENST00000498534 EIF2S3P41091 472 aaKnown RBP12.32□□□□□ -0.44
CNOT4-211ENST00000498534 CXCR3P49682 368 aa12.32□□□□□ -0.44
CNOT4-211ENST00000498534 IRAK1P51617 712 aa12.32□□□□□ -0.44
CNOT4-211ENST00000498534 TAS2R38P59533 333 aa12.32□□□□□ -0.44
CNOT4-211ENST00000498534 DAB2P98082 770 aa12.32□□□□□ -0.44
CNOT4-211ENST00000498534 KCNMA1Q12791 1236 aa12.32□□□□□ -0.44
CNOT4-211ENST00000498534 SETD3Q86TU7 594 aaPredicted RBP12.32□□□□□ -0.44
CNOT4-211ENST00000498534 HORMAD1Q86X24 394 aa12.32□□□□□ -0.44
CNOT4-211ENST00000498534 SLC25A45Q8N413 288 aa12.32□□□□□ -0.44
CNOT4-211ENST00000498534 TMEM35BQ8NCS4 154 aa12.32□□□□□ -0.44
CNOT4-211ENST00000498534 OR2A12Q8NGT7 310 aa12.32□□□□□ -0.44
CNOT4-211ENST00000498534 FAM174AQ8TBP5 190 aa12.32□□□□□ -0.44
CNOT4-211ENST00000498534 KLK6Q92876 244 aa12.32□□□□□ -0.44
CNOT4-211ENST00000498534 FGF11Q92914 225 aa12.32□□□□□ -0.44
CNOT4-211ENST00000498534 C1orf74Q96LT6 269 aa12.32□□□□□ -0.44
CNOT4-211ENST00000498534 UBL7Q96S82 380 aaPredicted RBP12.32□□□□□ -0.44
CNOT4-211ENST00000498534 NPY6RQ99463 290 aa12.32□□□□□ -0.44
CNOT4-211ENST00000498534 PIGVQ9NUD9 493 aa12.32□□□□□ -0.44
CNOT4-211ENST00000498534 KIAA1468Q9P260 1216 aa12.32□□□□□ -0.44
CNOT4-211ENST00000498534 DNAJC12Q9UKB3 198 aa12.32□□□□□ -0.44
CNOT4-211ENST00000498534 LOC400499M0QZD8 3231 aa12.32□□□□□ -0.44
CNOT4-211ENST00000498534 DOCK9Q9BZ29 2069 aa12.31□□□□□ -0.44
CNOT4-211ENST00000498534 NEMP2A6NFY4 417 aa12.31□□□□□ -0.44
CNOT4-211ENST00000498534 DRGXA6NNA5 263 aa12.31□□□□□ -0.44
CNOT4-211ENST00000498534 TRIM38O00635 465 aa12.31□□□□□ -0.44
CNOT4-211ENST00000498534 SNAP91O60641 907 aa12.31□□□□□ -0.44
CNOT4-211ENST00000498534 CNTN5O94779 1100 aa12.31□□□□□ -0.44
CNOT4-211ENST00000498534 ADCY5O95622 1261 aa12.31□□□□□ -0.44
CNOT4-211ENST00000498534 ALPPL2P10696 532 aa12.31□□□□□ -0.44
CNOT4-211ENST00000498534 HOXB1P14653 301 aaPredicted RBP12.31□□□□□ -0.44
CNOT4-211ENST00000498534 PRLRP16471 622 aa12.31□□□□□ -0.44
CNOT4-211ENST00000498534 HNRNPA2B1P22626 353 aaKnown RBP12.31□□□□□ -0.44
CNOT4-211ENST00000498534 DGKAP23743 735 aa12.31□□□□□ -0.44
CNOT4-211ENST00000498534 ITPKBP27987 946 aa12.31□□□□□ -0.44
CNOT4-211ENST00000498534 OR1E1P30953 314 aa12.31□□□□□ -0.44
CNOT4-211ENST00000498534 CLCN1P35523 988 aa12.31□□□□□ -0.44
CNOT4-211ENST00000498534 GGCXP38435 758 aa12.31□□□□□ -0.44
CNOT4-211ENST00000498534 SULT1E1P49888 294 aa12.31□□□□□ -0.44
CNOT4-211ENST00000498534 APBA1Q02410 837 aa12.31□□□□□ -0.44
CNOT4-211ENST00000498534 DEUP1Q05D60 604 aa12.31□□□□□ -0.44
CNOT4-211ENST00000498534 SLC20A2Q08357 652 aa12.31□□□□□ -0.44
CNOT4-211ENST00000498534 PROX2Q3B8N5 592 aa12.31□□□□□ -0.44
CNOT4-211ENST00000498534 PTPN20Q4JDL3 420 aa12.31□□□□□ -0.44
CNOT4-211ENST00000498534 ARSIQ5FYB1 569 aa12.31□□□□□ -0.44
CNOT4-211ENST00000498534 PIP5KL1Q5T9C9 394 aa12.31□□□□□ -0.44
CNOT4-211ENST00000498534 RETSATQ6NUM9 610 aa12.31□□□□□ -0.44
CNOT4-211ENST00000498534 SLC47A2Q86VL8 602 aa12.31□□□□□ -0.44
CNOT4-211ENST00000498534 DCP2Q8IU60 420 aaKnown RBP12.31□□□□□ -0.44
CNOT4-211ENST00000498534 TMEM145Q8NBT3 493 aa12.31□□□□□ -0.44
CNOT4-211ENST00000498534 RFFLQ8WZ73 363 aa12.31□□□□□ -0.44
CNOT4-211ENST00000498534 C18orf8Q96DM3 657 aa12.31□□□□□ -0.44
CNOT4-211ENST00000498534 PPP1R16AQ96I34 528 aa12.31□□□□□ -0.44
CNOT4-211ENST00000498534 BBC3Q96PG8 261 aaPredicted RBP12.31□□□□□ -0.44
CNOT4-211ENST00000498534 MYOCQ99972 504 aa12.31□□□□□ -0.44
CNOT4-211ENST00000498534 SPON2Q9BUD6 331 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms