RNA–Protein interactions for RNA: ENST00000498438.1

HOXD11-202, Transcript of homeobox D11, humanhuman

TSL 1 (best)

Gene HOXD11, Length 1,259 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD11-202ENST00000498438 ADPRHP54922 357 aa18.82■□□□□ 0.6
HOXD11-202ENST00000498438 POM121L1PQ3SYA9 428 aa18.82■□□□□ 0.6
HOXD11-202ENST00000498438 EFHC2Q5JST6 749 aa18.82■□□□□ 0.6
HOXD11-202ENST00000498438 PLEKHA7Q6IQ23 1121 aa18.82■□□□□ 0.6
HOXD11-202ENST00000498438 C22orf39Q6P5X5 142 aa18.82■□□□□ 0.6
HOXD11-202ENST00000498438 TMC6Q7Z403 805 aa18.82■□□□□ 0.6
HOXD11-202ENST00000498438 PYROXD2Q8N2H3 581 aa18.82■□□□□ 0.6
HOXD11-202ENST00000498438 PARVAQ9NVD7 372 aa18.82■□□□□ 0.6
HOXD11-202ENST00000498438 TMEM248Q9NWD8 314 aa18.82■□□□□ 0.6
HOXD11-202ENST00000498438 IFNKQ9P0W0 207 aa18.82■□□□□ 0.6
HOXD11-202ENST00000498438 PPM1HQ9ULR3 514 aa18.82■□□□□ 0.6
HOXD11-202ENST00000498438 C1QTNF3-AMACRE9PGA6 284 aa18.81■□□□□ 0.6
HOXD11-202ENST00000498438 ZMPSTE24O75844 475 aa18.81■□□□□ 0.6
HOXD11-202ENST00000498438 FTLP02792 175 aaPredicted RBP18.81■□□□□ 0.6
HOXD11-202ENST00000498438 DESP17661 470 aa18.81■□□□□ 0.6
HOXD11-202ENST00000498438 CD27P26842 260 aa18.81■□□□□ 0.6
HOXD11-202ENST00000498438 TDRD12Q587J7 1177 aaKnown RBP18.81■□□□□ 0.6
HOXD11-202ENST00000498438 FAM46CQ5VWP2 391 aa18.81■□□□□ 0.6
HOXD11-202ENST00000498438 OR2A12Q8NGT7 310 aa18.81■□□□□ 0.6
HOXD11-202ENST00000498438 OR2T34Q8NGX1 318 aa18.81■□□□□ 0.6
HOXD11-202ENST00000498438 OR14C36Q8NHC7 312 aa18.81■□□□□ 0.6
HOXD11-202ENST00000498438 PIP4K2CQ8TBX8 421 aa18.81■□□□□ 0.6
HOXD11-202ENST00000498438 CCDC114Q96M63 670 aa18.81■□□□□ 0.6
HOXD11-202ENST00000498438 ORAI3Q9BRQ5 295 aa18.81■□□□□ 0.6
HOXD11-202ENST00000498438 ZDHHC5Q9C0B5 715 aa18.81■□□□□ 0.6
HOXD11-202ENST00000498438 RETREG1Q9H6L5 497 aa18.81■□□□□ 0.6
HOXD11-202ENST00000498438 TM9SF3Q9HD45 589 aa18.81■□□□□ 0.6
HOXD11-202ENST00000498438 DNAAF2Q9NVR5 837 aaKnown RBP18.81■□□□□ 0.6
HOXD11-202ENST00000498438 DNAI1Q9UI46 699 aa18.81■□□□□ 0.6
HOXD11-202ENST00000498438 FZD10Q9ULW2 581 aa18.81■□□□□ 0.6
HOXD11-202ENST00000498438 GIPC1O14908 333 aa18.8■□□□□ 0.6
HOXD11-202ENST00000498438 RTN2O75298 545 aa18.8■□□□□ 0.6
HOXD11-202ENST00000498438 CTSLP07711 333 aa18.8■□□□□ 0.6
HOXD11-202ENST00000498438 CSRP1P21291 193 aaKnown RBP18.8■□□□□ 0.6
HOXD11-202ENST00000498438 PSMA2P25787 234 aa18.8■□□□□ 0.6
HOXD11-202ENST00000498438 L1CAMP32004 1257 aa18.8■□□□□ 0.6
HOXD11-202ENST00000498438 ACVRL1P37023 503 aa18.8■□□□□ 0.6
HOXD11-202ENST00000498438 CSNK1EP49674 416 aaKnown RBP18.8■□□□□ 0.6
HOXD11-202ENST00000498438 SERPINH1P50454 418 aaKnown RBP18.8■□□□□ 0.6
HOXD11-202ENST00000498438 AFF3P51826 1226 aaKnown RBP18.8■□□□□ 0.6
HOXD11-202ENST00000498438 ARF5P84085 180 aa18.8■□□□□ 0.6
HOXD11-202ENST00000498438 BNC1Q01954 994 aa18.8■□□□□ 0.6
HOXD11-202ENST00000498438 N4BP2L1Q5TBK1 243 aaPredicted RBP18.8■□□□□ 0.6
HOXD11-202ENST00000498438 HGSNATQ68CP4 663 aa18.8■□□□□ 0.6
HOXD11-202ENST00000498438 RETSATQ6NUM9 610 aa18.8■□□□□ 0.6
HOXD11-202ENST00000498438 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP18.8■□□□□ 0.6
HOXD11-202ENST00000498438 DEFB124Q8NES8 71 aa18.8■□□□□ 0.6
HOXD11-202ENST00000498438 FAM131CQ96AQ9 280 aa18.8■□□□□ 0.6
HOXD11-202ENST00000498438 ZNF653Q96CK0 615 aa18.8■□□□□ 0.6
HOXD11-202ENST00000498438 TNKS2Q9H2K2 1166 aa18.8■□□□□ 0.6
HOXD11-202ENST00000498438 CNOT8Q9UFF9 292 aaKnown RBP18.8■□□□□ 0.6
HOXD11-202ENST00000498438 FARP1Q9Y4F1 1045 aaPredicted RBP18.8■□□□□ 0.6
HOXD11-202ENST00000498438 TP53BP1Q12888 1972 aaPredicted RBP18.79■□□□□ 0.6
HOXD11-202ENST00000498438 A0A1B0GVT2 93 aa18.79■□□□□ 0.6
HOXD11-202ENST00000498438 CREB3O43889 395 aa18.79■□□□□ 0.6
HOXD11-202ENST00000498438 GJB3O75712 270 aa18.79■□□□□ 0.6
HOXD11-202ENST00000498438 EPHB2P29323 1055 aa18.79■□□□□ 0.6
HOXD11-202ENST00000498438 CHRNA3P32297 505 aa18.79■□□□□ 0.6
HOXD11-202ENST00000498438 ETFBP38117 255 aa18.79■□□□□ 0.6
HOXD11-202ENST00000498438 AIF1P55008 147 aa18.79■□□□□ 0.6
HOXD11-202ENST00000498438 ZBED6P86452 979 aa18.79■□□□□ 0.6
HOXD11-202ENST00000498438 ZNF252P-AS1Q0IIN9 211 aa18.79■□□□□ 0.6
HOXD11-202ENST00000498438 CNTN1Q12860 1018 aa18.79■□□□□ 0.6
HOXD11-202ENST00000498438 SEMA3BQ13214 749 aa18.79■□□□□ 0.6
HOXD11-202ENST00000498438 AGBL4Q5VU57 503 aa18.79■□□□□ 0.6
HOXD11-202ENST00000498438 LAYNQ6UX15 382 aa18.79■□□□□ 0.6
HOXD11-202ENST00000498438 CPLX3Q8WVH0 158 aa18.79■□□□□ 0.6
HOXD11-202ENST00000498438 SYN2Q92777 582 aaPredicted RBP18.79■□□□□ 0.6
HOXD11-202ENST00000498438 ARHGEF2Q92974 986 aaKnown RBP18.79■□□□□ 0.6
HOXD11-202ENST00000498438 IQCDQ96DY2 449 aa18.79■□□□□ 0.6
HOXD11-202ENST00000498438 EPAS1Q99814 870 aa18.79■□□□□ 0.6
HOXD11-202ENST00000498438 ACE2Q9BYF1 805 aaPredicted RBP18.79■□□□□ 0.6
HOXD11-202ENST00000498438 TRIM7Q9C029 511 aa18.79■□□□□ 0.6
HOXD11-202ENST00000498438 OSGEPQ9NPF4 335 aa18.79■□□□□ 0.6
HOXD11-202ENST00000498438 ACTL7AQ9Y615 435 aa18.79■□□□□ 0.6
HOXD11-202ENST00000498438 PCNX2A6NKB5 2137 aa18.79■□□□□ 0.6
HOXD11-202ENST00000498438 TMEM131Q92545 1883 aa18.78■□□□□ 0.6
HOXD11-202ENST00000498438 A0A1W2PPC4 97 aa18.78■□□□□ 0.6
HOXD11-202ENST00000498438 TMEM191CA6NGB0 347 aa18.78■□□□□ 0.6
HOXD11-202ENST00000498438 UPK3BL1B0FP48 263 aa18.78■□□□□ 0.6
HOXD11-202ENST00000498438 C10orf142B7Z368 130 aa18.78■□□□□ 0.6
HOXD11-202ENST00000498438 UPK3BL2E5RIL1 263 aa18.78■□□□□ 0.6
HOXD11-202ENST00000498438 SLC7A4O43246 635 aa18.78■□□□□ 0.6
HOXD11-202ENST00000498438 RAMP2O60895 175 aa18.78■□□□□ 0.6
HOXD11-202ENST00000498438 ZNF821O75541 412 aaPredicted RBP18.78■□□□□ 0.6
HOXD11-202ENST00000498438 GYPCP04921 128 aa18.78■□□□□ 0.6
HOXD11-202ENST00000498438 GRIA4P48058 902 aa18.78■□□□□ 0.6
HOXD11-202ENST00000498438 CCR5P51681 352 aa18.78■□□□□ 0.6
HOXD11-202ENST00000498438 PPP2CBP62714 309 aa18.78■□□□□ 0.6
HOXD11-202ENST00000498438 PPP2CAP67775 309 aa18.78■□□□□ 0.6
HOXD11-202ENST00000498438 SLC20A2Q08357 652 aa18.78■□□□□ 0.6
HOXD11-202ENST00000498438 TEAD4Q15561 434 aa18.78■□□□□ 0.6
HOXD11-202ENST00000498438 DPY19L3Q6ZPD9 716 aa18.78■□□□□ 0.6
HOXD11-202ENST00000498438 PIP4P1Q86T03 277 aa18.78■□□□□ 0.6
HOXD11-202ENST00000498438 RTL3Q8N8U3 475 aaKnown RBP18.78■□□□□ 0.6
HOXD11-202ENST00000498438 CHST14Q8NCH0 376 aa18.78■□□□□ 0.6
HOXD11-202ENST00000498438 GRIN3AQ8TCU5 1115 aa18.78■□□□□ 0.6
HOXD11-202ENST00000498438 TRIM11Q96F44 468 aa18.78■□□□□ 0.6
HOXD11-202ENST00000498438 CEP44Q9C0F1 390 aa18.78■□□□□ 0.6
HOXD11-202ENST00000498438 MAGEH1Q9H213 219 aa18.78■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms