RNA–Protein interactions for RNA: ENST00000498124.1

CDKN2A-208, Transcript of cyclin dependent kinase inhibitor 2A, humanhuman

TSL 1 (best) BASIC

Gene CDKN2A, Length 880 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN2A-208ENST00000498124 RRN3Q9NYV6 651 aa23.15■■□□□ 1.3
CDKN2A-208ENST00000498124 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP23.15■■□□□ 1.3
CDKN2A-208ENST00000498124 ARHGAP20Q9P2F6 1191 aa23.15■■□□□ 1.3
CDKN2A-208ENST00000498124 SLC25A13Q9UJS0 675 aa23.15■■□□□ 1.3
CDKN2A-208ENST00000498124 NOCTQ9UK39 431 aaKnown RBP23.15■■□□□ 1.3
CDKN2A-208ENST00000498124 VPS28Q9UK41 221 aa23.15■■□□□ 1.3
CDKN2A-208ENST00000498124 PPM1HQ9ULR3 514 aa23.15■■□□□ 1.3
CDKN2A-208ENST00000498124 GOLGA8CPA6NN73 597 aa23.14■■□□□ 1.29
CDKN2A-208ENST00000498124 TNFSF14O43557 240 aa23.14■■□□□ 1.29
CDKN2A-208ENST00000498124 PLRG1O43660 514 aaKnown RBP23.14■■□□□ 1.29
CDKN2A-208ENST00000498124 DFNA5O60443 496 aa23.14■■□□□ 1.29
CDKN2A-208ENST00000498124 CD38P28907 300 aa23.14■■□□□ 1.29
CDKN2A-208ENST00000498124 SCNN1AP37088 669 aa23.14■■□□□ 1.29
CDKN2A-208ENST00000498124 SULT1E1P49888 294 aa23.14■■□□□ 1.29
CDKN2A-208ENST00000498124 CDH4P55283 916 aa23.14■■□□□ 1.29
CDKN2A-208ENST00000498124 SNX16P57768 344 aa23.14■■□□□ 1.29
CDKN2A-208ENST00000498124 CDR2Q01850 454 aa23.14■■□□□ 1.29
CDKN2A-208ENST00000498124 DLG2Q15700 870 aa23.14■■□□□ 1.29
CDKN2A-208ENST00000498124 ASIC2Q16515 512 aa23.14■■□□□ 1.29
CDKN2A-208ENST00000498124 BRMS1LQ5PSV4 323 aa23.14■■□□□ 1.29
CDKN2A-208ENST00000498124 SFMBT2Q5VUG0 894 aa23.14■■□□□ 1.29
CDKN2A-208ENST00000498124 BNIPLQ7Z465 357 aa23.14■■□□□ 1.29
CDKN2A-208ENST00000498124 GATAD2AQ86YP4 633 aa23.14■■□□□ 1.29
CDKN2A-208ENST00000498124 TMEM35BQ8NCS4 154 aa23.14■■□□□ 1.29
CDKN2A-208ENST00000498124 OR8D1Q8WZ84 308 aa23.14■■□□□ 1.29
CDKN2A-208ENST00000498124 SERAC1Q96JX3 654 aa23.14■■□□□ 1.29
CDKN2A-208ENST00000498124 TBCBQ99426 244 aa23.14■■□□□ 1.29
CDKN2A-208ENST00000498124 TMPRSS4Q9NRS4 437 aa23.14■■□□□ 1.29
CDKN2A-208ENST00000498124 CAPN11Q9UMQ6 739 aa23.14■■□□□ 1.29
CDKN2A-208ENST00000498124 HS3ST2Q9Y278 367 aa23.14■■□□□ 1.29
CDKN2A-208ENST00000498124 ALOX15BO15296 676 aa23.13■■□□□ 1.29
CDKN2A-208ENST00000498124 SLC7A4O43246 635 aa23.13■■□□□ 1.29
CDKN2A-208ENST00000498124 SNAP91O60641 907 aa23.13■■□□□ 1.29
CDKN2A-208ENST00000498124 LSM8O95777 96 aaKnown RBP23.13■■□□□ 1.29
CDKN2A-208ENST00000498124 MT-CO1P00395 513 aa23.13■■□□□ 1.29
CDKN2A-208ENST00000498124 SRCP12931 536 aa23.13■■□□□ 1.29
CDKN2A-208ENST00000498124 FLT3P36888 993 aa23.13■■□□□ 1.29
CDKN2A-208ENST00000498124 NXPH1P58417 271 aa23.13■■□□□ 1.29
CDKN2A-208ENST00000498124 RNASE9P60153 205 aaKnown RBP23.13■■□□□ 1.29
CDKN2A-208ENST00000498124 ZBED6P86452 979 aa23.13■■□□□ 1.29
CDKN2A-208ENST00000498124 CNTN1Q12860 1018 aa23.13■■□□□ 1.29
CDKN2A-208ENST00000498124 POM121L1PQ3SYA9 428 aa23.13■■□□□ 1.29
CDKN2A-208ENST00000498124 C2CD6Q53TS8 623 aa23.13■■□□□ 1.29
CDKN2A-208ENST00000498124 SAP25Q8TEE9 199 aa23.13■■□□□ 1.29
CDKN2A-208ENST00000498124 AIPL1Q9NZN9 384 aa23.13■■□□□ 1.29
CDKN2A-208ENST00000498124 TPX2Q9ULW0 747 aaKnown RBP23.13■■□□□ 1.29
CDKN2A-208ENST00000498124 LUC7L2Q9Y383 392 aaKnown RBP23.13■■□□□ 1.29
CDKN2A-208ENST00000498124 LOC400499M0QZD8 3231 aa23.13■■□□□ 1.29
CDKN2A-208ENST00000498124 CACNA1GO43497 2377 aa23.13■■□□□ 1.29
CDKN2A-208ENST00000498124 DOCK9Q9BZ29 2069 aa23.12■■□□□ 1.29
CDKN2A-208ENST00000498124 TBC1D3DA0A087WVF3 549 aa23.12■■□□□ 1.29
CDKN2A-208ENST00000498124 TBC1D3IA0A087WXS9 549 aa23.12■■□□□ 1.29
CDKN2A-208ENST00000498124 TBC1D3EA0A087X179 549 aa23.12■■□□□ 1.29
CDKN2A-208ENST00000498124 TBC1D3KA0A087X1G2 549 aa23.12■■□□□ 1.29
CDKN2A-208ENST00000498124 TBC1D3FA6NER0 549 aaPredicted RBP23.12■■□□□ 1.29
CDKN2A-208ENST00000498124 TBC1D3LB9A6J9 549 aa23.12■■□□□ 1.29
CDKN2A-208ENST00000498124 MCF2LO15068 1137 aa23.12■■□□□ 1.29
CDKN2A-208ENST00000498124 CTSLP07711 333 aa23.12■■□□□ 1.29
CDKN2A-208ENST00000498124 MMEP08473 750 aa23.12■■□□□ 1.29
CDKN2A-208ENST00000498124 TPM1P09493 284 aa23.12■■□□□ 1.29
CDKN2A-208ENST00000498124 TBC1D3HP0C7X1 549 aa23.12■■□□□ 1.29
CDKN2A-208ENST00000498124 TAS2R38P59533 333 aa23.12■■□□□ 1.29
CDKN2A-208ENST00000498124 ACCSLQ4AC99 568 aa23.12■■□□□ 1.29
CDKN2A-208ENST00000498124 FAM102AQ5T9C2 384 aaPredicted RBP23.12■■□□□ 1.29
CDKN2A-208ENST00000498124 TBC1D3GQ6DHY5 549 aa23.12■■□□□ 1.29
CDKN2A-208ENST00000498124 TBC1D3CQ6IPX1 549 aa23.12■■□□□ 1.29
CDKN2A-208ENST00000498124 NAPEPLDQ6IQ20 393 aa23.12■■□□□ 1.29
CDKN2A-208ENST00000498124 TRIM72Q6ZMU5 477 aa23.12■■□□□ 1.29
CDKN2A-208ENST00000498124 DSG4Q86SJ6 1040 aa23.12■■□□□ 1.29
CDKN2A-208ENST00000498124 TBC1D3Q8IZP1 549 aaPredicted RBP23.12■■□□□ 1.29
CDKN2A-208ENST00000498124 PIP4K2CQ8TBX8 421 aa23.12■■□□□ 1.29
CDKN2A-208ENST00000498124 SLC20A1Q8WUM9 679 aa23.12■■□□□ 1.29
CDKN2A-208ENST00000498124 CPLX3Q8WVH0 158 aa23.12■■□□□ 1.29
CDKN2A-208ENST00000498124 SYN2Q92777 582 aaPredicted RBP23.12■■□□□ 1.29
CDKN2A-208ENST00000498124 C18orf8Q96DM3 657 aa23.12■■□□□ 1.29
CDKN2A-208ENST00000498124 PPP1R9BQ96SB3 815 aa23.12■■□□□ 1.29
CDKN2A-208ENST00000498124 KDM4CQ9H3R0 1056 aa23.12■■□□□ 1.29
CDKN2A-208ENST00000498124 WDCPQ9H6R7 721 aa23.12■■□□□ 1.29
CDKN2A-208ENST00000498124 ZNF212Q9UDV6 495 aa23.12■■□□□ 1.29
CDKN2A-208ENST00000498124 VPS51Q9UID3 782 aa23.12■■□□□ 1.29
CDKN2A-208ENST00000498124 STAP1Q9ULZ2 295 aa23.12■■□□□ 1.29
CDKN2A-208ENST00000498124 DOCK4Q8N1I0 1966 aa23.11■■□□□ 1.29
CDKN2A-208ENST00000498124 IGLV3-10A0A075B6K4 115 aa23.11■■□□□ 1.29
CDKN2A-208ENST00000498124 DRGXA6NNA5 263 aa23.11■■□□□ 1.29
CDKN2A-208ENST00000498124 K7ERQ8 282 aa23.11■■□□□ 1.29
CDKN2A-208ENST00000498124 RNF103O00237 685 aa23.11■■□□□ 1.29
CDKN2A-208ENST00000498124 GYPCP04921 128 aa23.11■■□□□ 1.29
CDKN2A-208ENST00000498124 RHOCP08134 193 aa23.11■■□□□ 1.29
CDKN2A-208ENST00000498124 EPHA8P29322 1005 aaPredicted RBP23.11■■□□□ 1.29
CDKN2A-208ENST00000498124 DEUP1Q05D60 604 aa23.11■■□□□ 1.29
CDKN2A-208ENST00000498124 SLC25A52Q3SY17 297 aa23.11■■□□□ 1.29
CDKN2A-208ENST00000498124 FAM46CQ5VWP2 391 aa23.11■■□□□ 1.29
CDKN2A-208ENST00000498124 IRF2BP2Q7Z5L9 587 aa23.11■■□□□ 1.29
CDKN2A-208ENST00000498124 TRIM69Q86WT6 500 aa23.11■■□□□ 1.29
CDKN2A-208ENST00000498124 SPATS2Q86XZ4 545 aaKnown RBP23.11■■□□□ 1.29
CDKN2A-208ENST00000498124 MDM1Q8TC05 714 aa23.11■■□□□ 1.29
CDKN2A-208ENST00000498124 MUC3BQ9H195 1237 aa23.11■■□□□ 1.29
CDKN2A-208ENST00000498124 GDF3Q9NR23 364 aa23.11■■□□□ 1.29
CDKN2A-208ENST00000498124 FTSJ1Q9UET6 329 aa23.11■■□□□ 1.29
CDKN2A-208ENST00000498124 TMEM59LQ9UK28 342 aa23.11■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms