RNA–Protein interactions for RNA: ENST00000497849.1

VIM-208, Transcript of vimentin, humanhuman

TSL 2

Gene VIM, Length 634 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-208ENST00000497849 Q6ZVU0 165 aa16.92■□□□□ 0.3
VIM-208ENST00000497849 CIR1Q86X95 450 aaPredicted RBP16.92■□□□□ 0.3
VIM-208ENST00000497849 CCAR2Q8N163 923 aaKnown RBP16.92■□□□□ 0.3
VIM-208ENST00000497849 TFAP2BQ92481 460 aa16.92■□□□□ 0.3
VIM-208ENST00000497849 ALG14Q96F25 216 aa16.92■□□□□ 0.3
VIM-208ENST00000497849 ZNF396Q96N95 335 aaPredicted RBP16.92■□□□□ 0.3
VIM-208ENST00000497849 WDR70Q9NW82 654 aa16.92■□□□□ 0.3
VIM-208ENST00000497849 CHMP5Q9NZZ3 219 aa16.92■□□□□ 0.3
VIM-208ENST00000497849 SERTAD1Q9UHV2 236 aa16.92■□□□□ 0.3
VIM-208ENST00000497849 SALL4Q9UJQ4 1053 aa16.92■□□□□ 0.3
VIM-208ENST00000497849 NAALADL1Q9UQQ1 740 aa16.92■□□□□ 0.3
VIM-208ENST00000497849 CSNK1G3Q9Y6M4 447 aa16.92■□□□□ 0.3
VIM-208ENST00000497849 SCN8AQ9UQD0 1980 aa16.91■□□□□ 0.3
VIM-208ENST00000497849 UTP20O75691 2785 aaKnown RBP16.91■□□□□ 0.3
VIM-208ENST00000497849 NOTCH2Q04721 2471 aa16.91■□□□□ 0.3
VIM-208ENST00000497849 A6NNZ2 444 aa16.91■□□□□ 0.3
VIM-208ENST00000497849 YEATS4O95619 227 aa16.91■□□□□ 0.3
VIM-208ENST00000497849 ZNF18P17022 549 aa16.91■□□□□ 0.3
VIM-208ENST00000497849 SLC5A2P31639 672 aa16.91■□□□□ 0.3
VIM-208ENST00000497849 PSMC2P35998 433 aaKnown RBP16.91■□□□□ 0.3
VIM-208ENST00000497849 C1QBPQ07021 282 aaKnown RBP16.91■□□□□ 0.3
VIM-208ENST00000497849 DEFB133Q30KQ1 61 aa16.91■□□□□ 0.3
VIM-208ENST00000497849 SEL1L3Q68CR1 1132 aa16.91■□□□□ 0.3
VIM-208ENST00000497849 CXorf57Q6NSI4 855 aaKnown RBP16.91■□□□□ 0.3
VIM-208ENST00000497849 LCLAT1Q6UWP7 414 aa16.91■□□□□ 0.3
VIM-208ENST00000497849 TAC4Q86UU9 113 aa16.91■□□□□ 0.3
VIM-208ENST00000497849 CHSY1Q86X52 802 aa16.91■□□□□ 0.3
VIM-208ENST00000497849 UBR7Q8N806 425 aa16.91■□□□□ 0.3
VIM-208ENST00000497849 ERCC4Q92889 916 aaPredicted RBP16.91■□□□□ 0.3
VIM-208ENST00000497849 PAGE5Q96GU1 130 aa16.91■□□□□ 0.3
VIM-208ENST00000497849 ZSWIM1Q9BR11 485 aa16.91■□□□□ 0.3
VIM-208ENST00000497849 NCKIPSDQ9NZQ3 722 aa16.91■□□□□ 0.3
VIM-208ENST00000497849 PCDHGA7Q9Y5G6 932 aa16.91■□□□□ 0.3
VIM-208ENST00000497849 SPTY2D1-AS1A0A0U1RR47 76 aa16.9■□□□□ 0.3
VIM-208ENST00000497849 POM121BA6NF01 834 aa16.9■□□□□ 0.3
VIM-208ENST00000497849 ACTN4O43707 911 aaKnown RBP16.9■□□□□ 0.3
VIM-208ENST00000497849 CUL2Q13617 745 aa16.9■□□□□ 0.3
VIM-208ENST00000497849 TMEM259Q4ZIN3 620 aa16.9■□□□□ 0.3
VIM-208ENST00000497849 ZC3H12AQ5D1E8 599 aaKnown RBP16.9■□□□□ 0.3
VIM-208ENST00000497849 RESP18Q5W5W9 173 aa16.9■□□□□ 0.3
VIM-208ENST00000497849 PTAR1Q7Z6K3 402 aaPredicted RBP16.9■□□□□ 0.3
VIM-208ENST00000497849 DCP2Q8IU60 420 aaKnown RBP16.9■□□□□ 0.3
VIM-208ENST00000497849 OR52K2Q8NGK3 314 aa16.9■□□□□ 0.3
VIM-208ENST00000497849 PRMT1Q99873 361 aaKnown RBP16.9■□□□□ 0.3
VIM-208ENST00000497849 HS3ST3A1Q9Y663 406 aa16.9■□□□□ 0.3
VIM-208ENST00000497849 RIOK3O14730 519 aaKnown RBP16.89■□□□□ 0.29
VIM-208ENST00000497849 MUSKO15146 869 aa16.89■□□□□ 0.29
VIM-208ENST00000497849 AQP9O43315 295 aa16.89■□□□□ 0.29
VIM-208ENST00000497849 BNIP3LO60238 219 aa16.89■□□□□ 0.29
VIM-208ENST00000497849 SFTPCP11686 197 aa16.89■□□□□ 0.29
VIM-208ENST00000497849 INHBCP55103 352 aa16.89■□□□□ 0.29
VIM-208ENST00000497849 ADAM9Q13443 819 aa16.89■□□□□ 0.29
VIM-208ENST00000497849 FGL2Q14314 439 aa16.89■□□□□ 0.29
VIM-208ENST00000497849 NR0B2Q15466 257 aa16.89■□□□□ 0.29
VIM-208ENST00000497849 TPRG1LQ5T0D9 272 aa16.89■□□□□ 0.29
VIM-208ENST00000497849 SYPL2Q5VXT5 272 aa16.89■□□□□ 0.29
VIM-208ENST00000497849 KYAT3Q6YP21 454 aaKnown RBP16.89■□□□□ 0.29
VIM-208ENST00000497849 PARGQ86W56 976 aa16.89■□□□□ 0.29
VIM-208ENST00000497849 CEP57L1Q8IYX8 460 aa16.89■□□□□ 0.29
VIM-208ENST00000497849 SH2D3CQ8N5H7 860 aa16.89■□□□□ 0.29
VIM-208ENST00000497849 FAM174AQ8TBP5 190 aa16.89■□□□□ 0.29
VIM-208ENST00000497849 LIN37Q96GY3 246 aaPredicted RBP16.89■□□□□ 0.29
VIM-208ENST00000497849 BOCQ9BWV1 1114 aa16.89■□□□□ 0.29
VIM-208ENST00000497849 MIS12Q9H081 205 aa16.89■□□□□ 0.29
VIM-208ENST00000497849 FAM13BQ9NYF5 915 aa16.89■□□□□ 0.29
VIM-208ENST00000497849 SLC25A13Q9UJS0 675 aa16.89■□□□□ 0.29
VIM-208ENST00000497849 ACSL6Q9UKU0 697 aa16.89■□□□□ 0.29
VIM-208ENST00000497849 KIAA1257Q9ULG3 409 aa16.89■□□□□ 0.29
VIM-208ENST00000497849 PCDHA7Q9UN72 937 aa16.89■□□□□ 0.29
VIM-208ENST00000497849 F5H5T6 163 aa16.88■□□□□ 0.29
VIM-208ENST00000497849 H3BM21 787 aa16.88■□□□□ 0.29
VIM-208ENST00000497849 KPNA3O00505 521 aaPredicted RBP16.88■□□□□ 0.29
VIM-208ENST00000497849 TPP1O14773 563 aa16.88■□□□□ 0.29
VIM-208ENST00000497849 PLD2O14939 933 aa16.88■□□□□ 0.29
VIM-208ENST00000497849 RAD51BO15315 384 aa16.88■□□□□ 0.29
VIM-208ENST00000497849 FBXO21O94952 628 aa16.88■□□□□ 0.29
VIM-208ENST00000497849 PCDH8O95206 1070 aa16.88■□□□□ 0.29
VIM-208ENST00000497849 APOEP02649 317 aa16.88■□□□□ 0.29
VIM-208ENST00000497849 CR2P20023 1033 aa16.88■□□□□ 0.29
VIM-208ENST00000497849 TBR1Q16650 682 aa16.88■□□□□ 0.29
VIM-208ENST00000497849 CBWD6Q4V339 395 aa16.88■□□□□ 0.29
VIM-208ENST00000497849 CBWD3Q5JTY5 395 aa16.88■□□□□ 0.29
VIM-208ENST00000497849 CBWD5Q5RIA9 395 aa16.88■□□□□ 0.29
VIM-208ENST00000497849 B3GNT8Q7Z7M8 397 aa16.88■□□□□ 0.29
VIM-208ENST00000497849 C14orf80Q86SX3 495 aa16.88■□□□□ 0.29
VIM-208ENST00000497849 SLC35F3Q8IY50 421 aa16.88■□□□□ 0.29
VIM-208ENST00000497849 LMX1AQ8TE12 382 aa16.88■□□□□ 0.29
VIM-208ENST00000497849 BTN2A3PQ96KV6 586 aa16.88■□□□□ 0.29
VIM-208ENST00000497849 HSFY1Q96LI6 401 aa16.88■□□□□ 0.29
VIM-208ENST00000497849 IL12RB2Q99665 862 aa16.88■□□□□ 0.29
VIM-208ENST00000497849 CCDC3Q9BQI4 270 aa16.88■□□□□ 0.29
VIM-208ENST00000497849 FEM1AQ9BSK4 669 aa16.88■□□□□ 0.29
VIM-208ENST00000497849 GDPD2Q9HCC8 539 aa16.88■□□□□ 0.29
VIM-208ENST00000497849 MAPK8IP1Q9UQF2 711 aa16.88■□□□□ 0.29
VIM-208ENST00000497849 OR51B4Q9Y5P0 310 aa16.88■□□□□ 0.29
VIM-208ENST00000497849 CLEC18AA5D8T8 446 aa16.87■□□□□ 0.29
VIM-208ENST00000497849 TCAF2A6NFQ2 919 aa16.87■□□□□ 0.29
VIM-208ENST00000497849 NTN3O00634 580 aaPredicted RBP16.87■□□□□ 0.29
VIM-208ENST00000497849 SPINT1O43278 529 aa16.87■□□□□ 0.29
VIM-208ENST00000497849 PPFIA2O75334 1257 aa16.87■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms