RNA–Protein interactions for RNA: ENST00000497527.1

HPS1-213, Transcript of HPS1, biogenesis of lysosomal organelles complex 3 subunit 1, humanhuman

TSL 3

Gene HPS1, Length 536 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1-213ENST00000497527 BBS7Q8IWZ6 715 aa12.42□□□□□ -0.42
HPS1-213ENST00000497527 KLHDC8BQ8IXV7 354 aa12.42□□□□□ -0.42
HPS1-213ENST00000497527 CNPY4Q8N129 248 aa12.42□□□□□ -0.42
HPS1-213ENST00000497527 CARNMT1Q8N4J0 409 aa12.42□□□□□ -0.42
HPS1-213ENST00000497527 TEX26Q8N6G2 289 aa12.42□□□□□ -0.42
HPS1-213ENST00000497527 CELF5Q8N6W0 485 aaKnown RBP12.42□□□□□ -0.42
HPS1-213ENST00000497527 PDCD7Q8N8D1 485 aaKnown RBP12.42□□□□□ -0.42
HPS1-213ENST00000497527 VN1R2Q8NFZ6 395 aa12.42□□□□□ -0.42
HPS1-213ENST00000497527 USP33Q8TEY7 942 aa12.42□□□□□ -0.42
HPS1-213ENST00000497527 DDI1Q8WTU0 396 aa12.42□□□□□ -0.42
HPS1-213ENST00000497527 WBP2Q969T9 261 aa12.42□□□□□ -0.42
HPS1-213ENST00000497527 PABPC5Q96DU9 382 aaKnown RBP12.42□□□□□ -0.42
HPS1-213ENST00000497527 TCEAL4Q96EI5 215 aa12.42□□□□□ -0.42
HPS1-213ENST00000497527 C9orf72Q96LT7 481 aa12.42□□□□□ -0.42
HPS1-213ENST00000497527 SH3GL2Q99962 352 aa12.42□□□□□ -0.42
HPS1-213ENST00000497527 TMEM109Q9BVC6 243 aa12.42□□□□□ -0.42
HPS1-213ENST00000497527 CEP41Q9BYV8 373 aa12.42□□□□□ -0.42
HPS1-213ENST00000497527 STMN4Q9H169 189 aaPredicted RBP12.42□□□□□ -0.42
HPS1-213ENST00000497527 MUC3BQ9H195 1237 aa12.42□□□□□ -0.42
HPS1-213ENST00000497527 ATP13A1Q9HD20 1204 aa12.42□□□□□ -0.42
HPS1-213ENST00000497527 VPS45Q9NRW7 570 aa12.42□□□□□ -0.42
HPS1-213ENST00000497527 DNAJC17Q9NVM6 304 aaKnown RBP12.42□□□□□ -0.42
HPS1-213ENST00000497527 MKI67P46013 3256 aaKnown RBP12.41□□□□□ -0.42
HPS1-213ENST00000497527 CXorf51AA0A1B0GTR3 108 aa12.41□□□□□ -0.42
HPS1-213ENST00000497527 ACSL3O95573 720 aa12.41□□□□□ -0.42
HPS1-213ENST00000497527 CPP00450 1065 aa12.41□□□□□ -0.42
HPS1-213ENST00000497527 CES1P23141 567 aa12.41□□□□□ -0.42
HPS1-213ENST00000497527 CD68P34810 354 aaPredicted RBP12.41□□□□□ -0.42
HPS1-213ENST00000497527 SLC12A1Q13621 1099 aa12.41□□□□□ -0.42
HPS1-213ENST00000497527 LBRQ14739 615 aaKnown RBP12.41□□□□□ -0.42
HPS1-213ENST00000497527 SLC14A2Q15849 920 aa12.41□□□□□ -0.42
HPS1-213ENST00000497527 SLC5A9Q2M3M2 681 aa12.41□□□□□ -0.42
HPS1-213ENST00000497527 TMC5Q6UXY8 1006 aa12.41□□□□□ -0.42
HPS1-213ENST00000497527 MFN1Q8IWA4 741 aa12.41□□□□□ -0.42
HPS1-213ENST00000497527 RIBC1Q8N443 379 aaPredicted RBP12.41□□□□□ -0.42
HPS1-213ENST00000497527 EFHBQ8N7U6 833 aa12.41□□□□□ -0.42
HPS1-213ENST00000497527 ZSCAN18Q8TBC5 510 aaPredicted RBP12.41□□□□□ -0.42
HPS1-213ENST00000497527 USP13Q92995 863 aaPredicted RBP12.41□□□□□ -0.42
HPS1-213ENST00000497527 PWWP2AQ96N64 755 aa12.41□□□□□ -0.42
HPS1-213ENST00000497527 SPON2Q9BUD6 331 aa12.41□□□□□ -0.42
HPS1-213ENST00000497527 ACE2Q9BYF1 805 aaPredicted RBP12.41□□□□□ -0.42
HPS1-213ENST00000497527 POLR1EQ9GZS1 481 aaKnown RBP12.41□□□□□ -0.42
HPS1-213ENST00000497527 SLC25A51Q9H1U9 297 aa12.41□□□□□ -0.42
HPS1-213ENST00000497527 EPB41L4BQ9H329 900 aa12.41□□□□□ -0.42
HPS1-213ENST00000497527 VPS37BQ9H9H4 285 aa12.41□□□□□ -0.42
HPS1-213ENST00000497527 BFARQ9NZS9 450 aa12.41□□□□□ -0.42
HPS1-213ENST00000497527 KIAA1522Q9P206 1035 aaPredicted RBP12.41□□□□□ -0.42
HPS1-213ENST00000497527 UBA2Q9UBT2 640 aaPredicted RBP12.41□□□□□ -0.42
HPS1-213ENST00000497527 SEPT3Q9UH03 358 aa12.41□□□□□ -0.42
HPS1-213ENST00000497527 TMEM265A0A087WTH1 108 aa12.4□□□□□ -0.42
HPS1-213ENST00000497527 SDR42E2A6NKP2 422 aa12.4□□□□□ -0.42
HPS1-213ENST00000497527 AGPSO00116 658 aa12.4□□□□□ -0.42
HPS1-213ENST00000497527 TRDMT1O14717 391 aaKnown RBP12.4□□□□□ -0.42
HPS1-213ENST00000497527 TCEA3O75764 348 aa12.4□□□□□ -0.42
HPS1-213ENST00000497527 HLA-DQB2P05538 268 aa12.4□□□□□ -0.42
HPS1-213ENST00000497527 CEBPBP17676 345 aa12.4□□□□□ -0.42
HPS1-213ENST00000497527 FSHRP23945 695 aa12.4□□□□□ -0.42
HPS1-213ENST00000497527 HOXD9P28356 352 aaPredicted RBP12.4□□□□□ -0.42
HPS1-213ENST00000497527 ATP5DP30049 168 aa12.4□□□□□ -0.42
HPS1-213ENST00000497527 ACVRL1P37023 503 aa12.4□□□□□ -0.42
HPS1-213ENST00000497527 MAGEA3P43357 314 aa12.4□□□□□ -0.42
HPS1-213ENST00000497527 NPY2RP49146 381 aa12.4□□□□□ -0.42
HPS1-213ENST00000497527 NTHL1P78549 312 aa12.4□□□□□ -0.42
HPS1-213ENST00000497527 ZXDBP98169 803 aa12.4□□□□□ -0.42
HPS1-213ENST00000497527 CDH17Q12864 832 aa12.4□□□□□ -0.42
HPS1-213ENST00000497527 ZNF77Q15935 545 aa12.4□□□□□ -0.42
HPS1-213ENST00000497527 KLHL38Q2WGJ6 581 aa12.4□□□□□ -0.42
HPS1-213ENST00000497527 KRT71Q3SY84 523 aa12.4□□□□□ -0.42
HPS1-213ENST00000497527 FNBP1LQ5T0N5 605 aa12.4□□□□□ -0.42
HPS1-213ENST00000497527 AGBL2Q5U5Z8 902 aa12.4□□□□□ -0.42
HPS1-213ENST00000497527 RNF219Q5W0B1 726 aaPredicted RBP12.4□□□□□ -0.42
HPS1-213ENST00000497527 KCTD11Q693B1 232 aa12.4□□□□□ -0.42
HPS1-213ENST00000497527 CXorf57Q6NSI4 855 aaKnown RBP12.4□□□□□ -0.42
HPS1-213ENST00000497527 RETSATQ6NUM9 610 aa12.4□□□□□ -0.42
HPS1-213ENST00000497527 GPR149Q86SP6 731 aa12.4□□□□□ -0.42
HPS1-213ENST00000497527 ARID3BQ8IVW6 561 aaPredicted RBP12.4□□□□□ -0.42
HPS1-213ENST00000497527 CNTD1Q8N815 330 aa12.4□□□□□ -0.42
HPS1-213ENST00000497527 DCAF4L2Q8NA75 395 aa12.4□□□□□ -0.42
HPS1-213ENST00000497527 FBXO36Q8NEA4 188 aa12.4□□□□□ -0.42
HPS1-213ENST00000497527 TTC16Q8NEE8 873 aa12.4□□□□□ -0.42
HPS1-213ENST00000497527 ACDQ96AP0 544 aa12.4□□□□□ -0.42
HPS1-213ENST00000497527 MYEOVQ96EZ4 313 aa12.4□□□□□ -0.42
HPS1-213ENST00000497527 C2orf49Q9BVC5 232 aaPredicted RBP12.4□□□□□ -0.42
HPS1-213ENST00000497527 CINPQ9BW66 212 aaPredicted RBP12.4□□□□□ -0.42
HPS1-213ENST00000497527 PDFQ9HBH1 243 aa12.4□□□□□ -0.42
HPS1-213ENST00000497527 OBP2AQ9NY56 170 aa12.4□□□□□ -0.42
HPS1-213ENST00000497527 FETUBQ9UGM5 382 aa12.4□□□□□ -0.42
HPS1-213ENST00000497527 TTLL3Q9Y4R7 772 aa12.4□□□□□ -0.42
HPS1-213ENST00000497527 NFS1Q9Y697 457 aa12.4□□□□□ -0.42
HPS1-213ENST00000497527 TEX264Q9Y6I9 313 aa12.4□□□□□ -0.42
HPS1-213ENST00000497527 ANKRD36A6QL64 1941 aa12.4□□□□□ -0.42
HPS1-213ENST00000497527 A0A1W2PPC1 479 aa12.39□□□□□ -0.43
HPS1-213ENST00000497527 EPOPA6NHQ4 379 aa12.39□□□□□ -0.43
HPS1-213ENST00000497527 HMGB1P1B2RPK0 211 aaPredicted RBP12.39□□□□□ -0.43
HPS1-213ENST00000497527 J3KR12 359 aa12.39□□□□□ -0.43
HPS1-213ENST00000497527 RASGRF2O14827 1237 aa12.39□□□□□ -0.43
HPS1-213ENST00000497527 PEX11BO96011 259 aa12.39□□□□□ -0.43
HPS1-213ENST00000497527 STX2P32856 288 aa12.39□□□□□ -0.43
HPS1-213ENST00000497527 ELK3P41970 407 aa12.39□□□□□ -0.43
HPS1-213ENST00000497527 SGSHP51688 502 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms