RNA–Protein interactions for RNA: ENST00000497377.5

HLA-B-254, Transcript of major histocompatibility complex, class I, B, humanhuman

Gene HLA-B, Length 917 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-B-254ENST00000497377 MTA2O94776 668 aa11.72□□□□□ -0.53
HLA-B-254ENST00000497377 PROSCO94903 275 aa11.72□□□□□ -0.53
HLA-B-254ENST00000497377 EPN2O95208 641 aa11.72□□□□□ -0.53
HLA-B-254ENST00000497377 LCA5LO95447 670 aa11.72□□□□□ -0.53
HLA-B-254ENST00000497377 DNTTP04053 509 aa11.72□□□□□ -0.53
HLA-B-254ENST00000497377 FECHP22830 423 aa11.72□□□□□ -0.53
HLA-B-254ENST00000497377 CD6P30203 668 aa11.72□□□□□ -0.53
HLA-B-254ENST00000497377 MAN1A1P33908 653 aa11.72□□□□□ -0.53
HLA-B-254ENST00000497377 ARL4AP40617 200 aa11.72□□□□□ -0.53
HLA-B-254ENST00000497377 ARHGAP25P42331 645 aa11.72□□□□□ -0.53
HLA-B-254ENST00000497377 MLLT3P42568 568 aaPredicted RBP11.72□□□□□ -0.53
HLA-B-254ENST00000497377 STK19P49842 368 aaPredicted RBP11.72□□□□□ -0.53
HLA-B-254ENST00000497377 RPS14P62263 151 aaKnown RBP11.72□□□□□ -0.53
HLA-B-254ENST00000497377 POLD3Q15054 466 aaPredicted RBP11.72□□□□□ -0.53
HLA-B-254ENST00000497377 TCEAL1Q15170 157 aa11.72□□□□□ -0.53
HLA-B-254ENST00000497377 SPA17Q15506 151 aa11.72□□□□□ -0.53
HLA-B-254ENST00000497377 DLG2Q15700 870 aa11.72□□□□□ -0.53
HLA-B-254ENST00000497377 DPYSL2Q16555 572 aa11.72□□□□□ -0.53
HLA-B-254ENST00000497377 LPAL2Q16609 132 aa11.72□□□□□ -0.53
HLA-B-254ENST00000497377 PARP15Q460N3 678 aa11.72□□□□□ -0.53
HLA-B-254ENST00000497377 ACCSLQ4AC99 568 aa11.72□□□□□ -0.53
HLA-B-254ENST00000497377 IL31Q6EBC2 164 aa11.72□□□□□ -0.53
HLA-B-254ENST00000497377 TMTC1Q8IUR5 882 aa11.72□□□□□ -0.53
HLA-B-254ENST00000497377 UMODL1-AS1Q8N2C9 162 aa11.72□□□□□ -0.53
HLA-B-254ENST00000497377 ATP11CQ8NB49 1132 aa11.72□□□□□ -0.53
HLA-B-254ENST00000497377 TTC13Q8NBP0 860 aa11.72□□□□□ -0.53
HLA-B-254ENST00000497377 OR7D4Q8NG98 312 aa11.72□□□□□ -0.53
HLA-B-254ENST00000497377 FRS2Q8WU20 508 aa11.72□□□□□ -0.53
HLA-B-254ENST00000497377 RFFLQ8WZ73 363 aa11.72□□□□□ -0.53
HLA-B-254ENST00000497377 PTPRN2Q92932 1015 aa11.72□□□□□ -0.53
HLA-B-254ENST00000497377 ARHGEF2Q92974 986 aaKnown RBP11.72□□□□□ -0.53
HLA-B-254ENST00000497377 ERLEC1Q96DZ1 483 aa11.72□□□□□ -0.53
HLA-B-254ENST00000497377 SPON2Q9BUD6 331 aa11.72□□□□□ -0.53
HLA-B-254ENST00000497377 PACSIN1Q9BY11 444 aa11.72□□□□□ -0.53
HLA-B-254ENST00000497377 MAGEB5Q9BZ81 275 aa11.72□□□□□ -0.53
HLA-B-254ENST00000497377 CEP44Q9C0F1 390 aa11.72□□□□□ -0.53
HLA-B-254ENST00000497377 PCED1AQ9H1Q7 454 aa11.72□□□□□ -0.53
HLA-B-254ENST00000497377 SLC6A17Q9H1V8 727 aa11.72□□□□□ -0.53
HLA-B-254ENST00000497377 ZWILCHQ9H900 591 aa11.72□□□□□ -0.53
HLA-B-254ENST00000497377 DNAI1Q9UI46 699 aa11.72□□□□□ -0.53
HLA-B-254ENST00000497377 MBD1Q9UIS9 605 aaPredicted RBP11.72□□□□□ -0.53
HLA-B-254ENST00000497377 INVSQ9Y283 1065 aa11.72□□□□□ -0.53
HLA-B-254ENST00000497377 GPR179Q6PRD1 2367 aa11.72□□□□□ -0.53
HLA-B-254ENST00000497377 ABCA7Q8IZY2 2146 aa11.72□□□□□ -0.53
HLA-B-254ENST00000497377 RALGAPA1Q6GYQ0 2036 aa11.72□□□□□ -0.53
HLA-B-254ENST00000497377 EP300Q09472 2414 aaPredicted RBP11.71□□□□□ -0.53
HLA-B-254ENST00000497377 PTPRZ1P23471 2315 aaPredicted RBP11.71□□□□□ -0.53
HLA-B-254ENST00000497377 CEP192Q8TEP8 1941 aa11.71□□□□□ -0.53
HLA-B-254ENST00000497377 H3BRJ5 948 aa11.71□□□□□ -0.53
HLA-B-254ENST00000497377 DAPK3O43293 454 aa11.71□□□□□ -0.53
HLA-B-254ENST00000497377 NDUFS2O75306 463 aa11.71□□□□□ -0.53
HLA-B-254ENST00000497377 ZMPSTE24O75844 475 aa11.71□□□□□ -0.53
HLA-B-254ENST00000497377 IPO7O95373 1038 aaKnown RBP11.71□□□□□ -0.53
HLA-B-254ENST00000497377 ADH1BP00325 375 aa11.71□□□□□ -0.53
HLA-B-254ENST00000497377 SRCP12931 536 aa11.71□□□□□ -0.53
HLA-B-254ENST00000497377 BCKDHBP21953 392 aa11.71□□□□□ -0.53
HLA-B-254ENST00000497377 IL1R2P27930 398 aa11.71□□□□□ -0.53
HLA-B-254ENST00000497377 SERPINH1P50454 418 aaKnown RBP11.71□□□□□ -0.53
HLA-B-254ENST00000497377 TPMTP51580 245 aa11.71□□□□□ -0.53
HLA-B-254ENST00000497377 NDST2P52849 883 aa11.71□□□□□ -0.53
HLA-B-254ENST00000497377 RPL6Q02878 288 aaKnown RBP11.71□□□□□ -0.53
HLA-B-254ENST00000497377 SLC25A11Q02978 314 aaKnown RBP11.71□□□□□ -0.53
HLA-B-254ENST00000497377 CST6Q15828 149 aa11.71□□□□□ -0.53
HLA-B-254ENST00000497377 CA9Q16790 459 aa11.71□□□□□ -0.53
HLA-B-254ENST00000497377 PPP6R3Q5H9R7 873 aaPredicted RBP11.71□□□□□ -0.53
HLA-B-254ENST00000497377 RFX8Q6ZV50 586 aa11.71□□□□□ -0.53
HLA-B-254ENST00000497377 USP30Q70CQ3 517 aa11.71□□□□□ -0.53
HLA-B-254ENST00000497377 LZTR1Q8N653 840 aa11.71□□□□□ -0.53
HLA-B-254ENST00000497377 CADM4Q8NFZ8 388 aa11.71□□□□□ -0.53
HLA-B-254ENST00000497377 SLC35G2Q8TBE7 412 aa11.71□□□□□ -0.53
HLA-B-254ENST00000497377 CASKIN2Q8WXE0 1202 aa11.71□□□□□ -0.53
HLA-B-254ENST00000497377 OR8D1Q8WZ84 308 aa11.71□□□□□ -0.53
HLA-B-254ENST00000497377 FOXJ1Q92949 421 aa11.71□□□□□ -0.53
HLA-B-254ENST00000497377 ISG20Q96AZ6 181 aaKnown RBP11.71□□□□□ -0.53
HLA-B-254ENST00000497377 BTBD6Q96KE9 485 aa11.71□□□□□ -0.53
HLA-B-254ENST00000497377 KCTD15Q96SI1 283 aaPredicted RBP11.71□□□□□ -0.53
HLA-B-254ENST00000497377 NDFIP2Q9NV92 336 aa11.71□□□□□ -0.53
HLA-B-254ENST00000497377 GPATCH2LQ9NWQ4 482 aa11.71□□□□□ -0.53
HLA-B-254ENST00000497377 WSB2Q9NYS7 404 aaPredicted RBP11.71□□□□□ -0.53
HLA-B-254ENST00000497377 RCOR3Q9P2K3 495 aaPredicted RBP11.71□□□□□ -0.53
HLA-B-254ENST00000497377 CYP8B1Q9UNU6 501 aa11.71□□□□□ -0.53
HLA-B-254ENST00000497377 NCKAP1Q9Y2A7 1128 aa11.71□□□□□ -0.53
HLA-B-254ENST00000497377 ZNF292O60281 2723 aa11.7□□□□□ -0.54
HLA-B-254ENST00000497377 BCLAF3A2AJT9 711 aaKnown RBP11.7□□□□□ -0.54
HLA-B-254ENST00000497377 MCF2LO15068 1137 aa11.7□□□□□ -0.54
HLA-B-254ENST00000497377 KDELR3O43731 214 aa11.7□□□□□ -0.54
HLA-B-254ENST00000497377 MT-CO1P00395 513 aa11.7□□□□□ -0.54
HLA-B-254ENST00000497377 KRT7P08729 469 aa11.7□□□□□ -0.54
HLA-B-254ENST00000497377 RARAP10276 462 aa11.7□□□□□ -0.54
HLA-B-254ENST00000497377 GOT1P17174 413 aa11.7□□□□□ -0.54
HLA-B-254ENST00000497377 C5AR1P21730 350 aa11.7□□□□□ -0.54
HLA-B-254ENST00000497377 HOXD12P35452 270 aa11.7□□□□□ -0.54
HLA-B-254ENST00000497377 ACVRL1P37023 503 aa11.7□□□□□ -0.54
HLA-B-254ENST00000497377 SSR1P43307 286 aaKnown RBP11.7□□□□□ -0.54
HLA-B-254ENST00000497377 MAGEA1P43355 309 aa11.7□□□□□ -0.54
HLA-B-254ENST00000497377 RECQLP46063 649 aaPredicted RBP11.7□□□□□ -0.54
HLA-B-254ENST00000497377 HADHBP55084 474 aaKnown RBP11.7□□□□□ -0.54
HLA-B-254ENST00000497377 FAM46CQ5VWP2 391 aa11.7□□□□□ -0.54
HLA-B-254ENST00000497377 C22orf39Q6P5X5 142 aa11.7□□□□□ -0.54
HLA-B-254ENST00000497377 Q6ZVU0 165 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms